RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TRBV19A0A075B6N1 114 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 TMSB15BA0A087X1C1 80 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 TRAV8-1A0A0A6YYK1 113 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 IGHV3-15A0A0B4J1V0 119 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 LOC107984156A0A0G2JMH3 177 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 A0A0J9YX75 114 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 SPTY2D1-AS1A0A0U1RR47 76 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 FAM236AA0A1B0GUQ0 79 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 FAM236BA0A1B0GV22 79 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 TINCRA0A1B0GVN0 87 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 TMEM223A0PJW6 202 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 NDUFC2-KCTD14E9PQ53 114 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 SMKR1H3BMG3 65 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 H3BMM0 161 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 CCL21O00585 134 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 IGLV1-47P01700 117 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 CHTF8P0CG12 524 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 ZNF22P17026 224 aaPredicted RBP1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 CKS2P33552 79 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 EMP1P54849 157 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 ERCC8Q13216 396 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 PMVKQ15126 192 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 ATXN8Q156A1 80 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 ZNF56Q15929 161 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 RPL39P5Q59GN2 51 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 FAM201AQ5SY85 155 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 GUSBP11Q6P575 273 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 HRCT1Q6UXD1 115 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 AAED1Q7RTV5 226 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 ARL17AQ8IVW1 177 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 SLC25A45Q8N413 288 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 C8orf31Q8N9H6 132 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 C20orf203Q8NBC4 194 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 TMEM167AQ8TBQ9 72 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 SMCR5Q8TEV8 140 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 UBE2WQ96B02 151 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 TOMM6Q96B49 74 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 SHANK2-AS3Q9BTD1 123 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 RTL8AQ9BWD3 113 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 DPH3P1Q9H4G8 78 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 MRPL36Q9P0J6 103 aaKnown RBP1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 C22orf24Q9Y442 160 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 TIMM8BQ9Y5J9 83 aaPredicted RBP1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 CEP192Q8TEP8 1941 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 GOLGA4Q13439 2230 aaKnown RBP1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 PRRC2BQ5JSZ5 2229 aaKnown RBP1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 RTTNQ86VV8 2226 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 ZNF407Q9C0G0 2248 aa1.63□□□□□ -2.15
HMGB3P2-201ENST00000411913 TRBV7-1A0A0A6YYK4 115 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 IGHV3-43A0A0B4J1X8 118 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 RBMY1BA6NDE4 496 aaKnown RBP1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 RBMY1EA6NEQ0 496 aaKnown RBP1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 C11orf86A6NJI1 115 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 ZNF815PA8K554 130 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 DEFB108AA8MXU0 73 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 IQCF6A8MYZ5 107 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 E7EUB6 86 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 H3BRN7 92 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 H3BVH4 76 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 J3QQQ9 107 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 ATOX1O00244 68 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 LST1O00453 97 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 SH2D1AO60880 128 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 NDUFA3O95167 84 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 IGLV3-19P01714 112 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 TRACP01848 142 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 IGHV4-34P06331 123 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 RBMY1DP0C7P1 496 aaKnown RBP1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 RBMY1A1P0DJD3 496 aaKnown RBP1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 IGHV3-43DP0DP04 118 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 COX6A1P12074 109 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 SUB1P53999 127 aaKnown RBP eCLIP1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 GFERP55789 205 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 TSPEAR-AS2P59090 65 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 CCL8P80075 99 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 WT1-ASQ06250 92 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 PDE6HQ13956 83 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 TMEM155Q4W5P6 130 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 LINC00336Q6ZUF6 198 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 GOLT1AQ6ZVE7 132 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 ASCL5Q7RTU5 278 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 PRNTQ86SH4 94 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 MDP1Q86V88 176 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 SERP2Q8N6R1 65 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 FAM216BQ8N7L0 139 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 DAND5Q8N907 189 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 TET1Q8NFU7 2136 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 LINC00477Q96M19 166 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 DEFB127Q9H1M4 99 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 XCL2Q9UBD3 114 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 LINC00527Q9UJ94 153 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 SLC25A15Q9Y619 301 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 TET2Q6N021 2002 aaPredicted RBP1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 UNC13CQ8NB66 2214 aa1.62□□□□□ -2.15
HMGB3P2-201ENST00000411913 MYO9BQ13459 2157 aa1.61□□□□□ -2.15
HMGB3P2-201ENST00000411913 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.61□□□□□ -2.15
HMGB3P2-201ENST00000411913 TRAV13-1A0A0B4J241 112 aa1.61□□□□□ -2.15
HMGB3P2-201ENST00000411913 IGHV1OR15-9A0A0B4J2B8 117 aa1.61□□□□□ -2.15
HMGB3P2-201ENST00000411913 IGHV1-69DA0A0B4J2H0 117 aa1.61□□□□□ -2.15
HMGB3P2-201ENST00000411913 hADV29S1A0JD25 119 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms