RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 CCL7P80098 99 aa-2.19□□□□□ -2.76
RNU4-43P-201ENST00000410628 Q5VV11 94 aa-2.19□□□□□ -2.76
RNU4-43P-201ENST00000410628 NDUFA11Q86Y39 141 aa-2.19□□□□□ -2.76
RNU4-43P-201ENST00000410628 CCDC171Q6TFL3 1326 aa-2.19□□□□□ -2.76
RNU4-43P-201ENST00000410628 PRRC2CQ9Y520 2896 aaKnown RBP-2.2□□□□□ -2.76
RNU4-43P-201ENST00000410628 M0QX08 132 aa-2.2□□□□□ -2.76
RNU4-43P-201ENST00000410628 SLC25A5P05141 298 aaKnown RBP-2.2□□□□□ -2.76
RNU4-43P-201ENST00000410628 HRCT1Q6UXD1 115 aa-2.2□□□□□ -2.76
RNU4-43P-201ENST00000410628 DYNLRB2Q8TF09 96 aa-2.2□□□□□ -2.76
RNU4-43P-201ENST00000410628 CBLN4Q9NTU7 201 aa-2.2□□□□□ -2.76
RNU4-43P-201ENST00000410628 ADCY9O60503 1353 aa-2.21□□□□□ -2.76
RNU4-43P-201ENST00000410628 S100A6P06703 90 aa-2.21□□□□□ -2.76
RNU4-43P-201ENST00000410628 LSM3P62310 102 aaKnown RBP-2.21□□□□□ -2.76
RNU4-43P-201ENST00000410628 PLGLB1Q02325 96 aa-2.21□□□□□ -2.76
RNU4-43P-201ENST00000410628 DYDC1Q8WWB3 177 aa-2.21□□□□□ -2.76
RNU4-43P-201ENST00000410628 PPP1R14BQ96C90 147 aa-2.21□□□□□ -2.76
RNU4-43P-201ENST00000410628 LINC00472Q9H8W2 130 aa-2.21□□□□□ -2.76
RNU4-43P-201ENST00000410628 ERG28Q9UKR5 140 aa-2.21□□□□□ -2.76
RNU4-43P-201ENST00000410628 NIPBLQ6KC79 2804 aaeCLIP-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 PNMA8CA0A1B0GUJ8 204 aa-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 CLPSL1A2RUU4 121 aa-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 SRP9P49458 86 aaKnown RBP-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 BAGE3Q86Y29 109 aa-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 SNX29P2Q8IUI4 249 aa-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 GINS3Q9BRX5 216 aa-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 AGPAT4-IT1Q9H0P7 198 aa-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 ARL2BPQ9Y2Y0 163 aa-2.22□□□□□ -2.76
RNU4-43P-201ENST00000410628 FER1L6Q2WGJ9 1857 aa-2.22□□□□□ -2.77
RNU4-43P-201ENST00000410628 TEP1Q99973 2627 aaKnown RBP-2.22□□□□□ -2.77
RNU4-43P-201ENST00000410628 PLECQ15149 4684 aaKnown RBP-2.23□□□□□ -2.77
RNU4-43P-201ENST00000410628 HSD17B12Q53GQ0 312 aa-2.23□□□□□ -2.77
RNU4-43P-201ENST00000410628 METTL1Q9UBP6 276 aaKnown RBP-2.23□□□□□ -2.77
RNU4-43P-201ENST00000410628 UFC1Q9Y3C8 167 aa-2.23□□□□□ -2.77
RNU4-43P-201ENST00000410628 RNF213Q63HN8 5207 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 VPS13BQ7Z7G8 4022 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 CASKIN1Q8WXD9 1431 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 NBASA2RRP1 2371 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 TRAV2A0A0B4J234 112 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 FAM25EA8MYX2 175 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 UQCRQO14949 82 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 TCRAP04437 139 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 TMEM91Q6ZNR0 172 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 OR13C6PQ8NH95 151 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 SLC35B3Q9H1N7 401 aa-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 XIRP1Q702N8 1843 aaKnown RBP-2.24□□□□□ -2.77
RNU4-43P-201ENST00000410628 KDM5AP29375 1690 aaKnown RBP-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 TRBV7-6A0A0J9YX20 115 aa-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 SMIM6P0DI80 62 aa-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 CDKN2CP42773 168 aa-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 MRPS15P82914 257 aaKnown RBP-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 C9orf116Q5BN46 136 aaPredicted RBP-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 SMIM20Q8N5G0 67 aa-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 FAM24BQ8N5W8 94 aa-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 C10orf82Q8WW14 230 aa-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 NOP16Q9Y3C1 178 aaKnown RBP-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 MYH3P11055 1940 aa-2.25□□□□□ -2.77
RNU4-43P-201ENST00000410628 MUC22E2RYF6 1773 aaPredicted RBP-2.26□□□□□ -2.77
RNU4-43P-201ENST00000410628 TRAPPC2LQ9UL33 140 aa-2.26□□□□□ -2.77
RNU4-43P-201ENST00000410628 CAMSAP1Q5T5Y3 1602 aa-2.27□□□□□ -2.77
RNU4-43P-201ENST00000410628 PGRMC1O00264 195 aaKnown RBP-2.27□□□□□ -2.77
RNU4-43P-201ENST00000410628 MT1AP04731 61 aa-2.27□□□□□ -2.77
RNU4-43P-201ENST00000410628 RPL22P35268 128 aaKnown RBP-2.27□□□□□ -2.77
RNU4-43P-201ENST00000410628 LAMTOR2Q9Y2Q5 125 aa-2.27□□□□□ -2.77
RNU4-43P-201ENST00000410628 LYSTQ99698 3801 aa-2.27□□□□□ -2.77
RNU4-43P-201ENST00000410628 PLB1Q6P1J6 1458 aa-2.27□□□□□ -2.77
RNU4-43P-201ENST00000410628 IFNA1P01562 189 aa-2.28□□□□□ -2.77
RNU4-43P-201ENST00000410628 HIST1H1BP16401 226 aaKnown RBP-2.28□□□□□ -2.77
RNU4-43P-201ENST00000410628 UBE2D1P51668 147 aa-2.28□□□□□ -2.77
RNU4-43P-201ENST00000410628 GNG3P63215 75 aa-2.28□□□□□ -2.77
RNU4-43P-201ENST00000410628 PTRHD1Q6GMV3 140 aaKnown RBP-2.28□□□□□ -2.77
RNU4-43P-201ENST00000410628 DEFB123Q8N688 67 aa-2.28□□□□□ -2.77
RNU4-43P-201ENST00000410628 GOLGA4Q13439 2230 aaKnown RBP-2.28□□□□□ -2.77
RNU4-43P-201ENST00000410628 ANK3Q12955 4377 aaKnown RBP-2.29□□□□□ -2.78
RNU4-43P-201ENST00000410628 PITX3O75364 302 aa-2.29□□□□□ -2.78
RNU4-43P-201ENST00000410628 DHRS4L2Q6PKH6 230 aa-2.29□□□□□ -2.78
RNU4-43P-201ENST00000410628 APLNQ9ULZ1 77 aa-2.29□□□□□ -2.78
RNU4-43P-201ENST00000410628 A2MP01023 1474 aa-2.29□□□□□ -2.78
RNU4-43P-201ENST00000410628 KDM5CP41229 1560 aa-2.29□□□□□ -2.78
RNU4-43P-201ENST00000410628 ZNF236Q9UL36 1845 aa-2.29□□□□□ -2.78
RNU4-43P-201ENST00000410628 CCDC179H3BU77 68 aa-2.3□□□□□ -2.78
RNU4-43P-201ENST00000410628 Q6JHZ5 121 aa-2.3□□□□□ -2.78
RNU4-43P-201ENST00000410628 ATP6V0E2Q8NHE4 81 aa-2.3□□□□□ -2.78
RNU4-43P-201ENST00000410628 CEP19Q96LK0 163 aa-2.3□□□□□ -2.78
RNU4-43P-201ENST00000410628 NDUFA12Q9UI09 145 aa-2.3□□□□□ -2.78
RNU4-43P-201ENST00000410628 MED31Q9Y3C7 131 aa-2.3□□□□□ -2.78
RNU4-43P-201ENST00000410628 DNAJC15Q9Y5T4 150 aa-2.3□□□□□ -2.78
RNU4-43P-201ENST00000410628 DMXL1Q9Y485 3027 aa-2.31□□□□□ -2.78
RNU4-43P-201ENST00000410628 LAMA3Q16787 3333 aa-2.31□□□□□ -2.78
RNU4-43P-201ENST00000410628 NSD3Q9BZ95 1437 aa-2.31□□□□□ -2.78
RNU4-43P-201ENST00000410628 PSPHP78330 225 aa-2.32□□□□□ -2.78
RNU4-43P-201ENST00000410628 AKAP13Q12802 2813 aa-2.32□□□□□ -2.78
RNU4-43P-201ENST00000410628 APOBP04114 4563 aaKnown RBP-2.33□□□□□ -2.78
RNU4-43P-201ENST00000410628 CTXND1A0A1B0GTU2 59 aa-2.33□□□□□ -2.78
RNU4-43P-201ENST00000410628 H0YJX3 145 aa-2.33□□□□□ -2.78
RNU4-43P-201ENST00000410628 J3QLW9 94 aa-2.33□□□□□ -2.78
RNU4-43P-201ENST00000410628 M0R135 149 aa-2.33□□□□□ -2.78
RNU4-43P-201ENST00000410628 CTXN2P0C2S0 81 aa-2.33□□□□□ -2.78
RNU4-43P-201ENST00000410628 CCL18P55774 89 aa-2.33□□□□□ -2.78
RNU4-43P-201ENST00000410628 DCUN1D2Q6PH85 259 aa-2.33□□□□□ -2.78
RNU4-43P-201ENST00000410628 GAPVD1Q14C86 1478 aa-2.33□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms