RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 NEGR1Q7Z3B1 354 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 NEXN-AS1Q8NBZ9 246 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 RPL36ALQ969Q0 106 aaKnown RBP11.52□□□□□ -0.57
SUMO1-208ENST00000409627 MRAP2Q96G30 205 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 DNAJC30Q96LL9 226 aa11.52□□□□□ -0.57
SUMO1-208ENST00000409627 TRAV26-2A0A0B4J265 109 aa11.51□□□□□ -0.57
SUMO1-208ENST00000409627 ELOBQ15370 118 aa11.51□□□□□ -0.57
SUMO1-208ENST00000409627 ZNRF2Q8NHG8 242 aa11.51□□□□□ -0.57
SUMO1-208ENST00000409627 UBE2D3P61077 147 aa11.5□□□□□ -0.57
SUMO1-208ENST00000409627 UBE2D2P62837 147 aa11.5□□□□□ -0.57
SUMO1-208ENST00000409627 NIT2Q9NQR4 276 aa11.5□□□□□ -0.57
SUMO1-208ENST00000409627 SMCO4Q9NRQ5 59 aa11.5□□□□□ -0.57
SUMO1-208ENST00000409627 TRBV24-1A0A075B6N3 115 aa11.49□□□□□ -0.57
SUMO1-208ENST00000409627 COX19Q49B96 90 aa11.49□□□□□ -0.57
SUMO1-208ENST00000409627 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
SUMO1-208ENST00000409627 ATP6V0E2Q8NHE4 81 aa11.49□□□□□ -0.57
SUMO1-208ENST00000409627 YPEL4Q96NS1 127 aa11.49□□□□□ -0.57
SUMO1-208ENST00000409627 TNFRSF18Q9Y5U5 241 aa11.49□□□□□ -0.57
SUMO1-208ENST00000409627 TGIF2-C20orf24A0A0A6YYL0 155 aa11.48□□□□□ -0.57
SUMO1-208ENST00000409627 CCL18P55774 89 aa11.48□□□□□ -0.57
SUMO1-208ENST00000409627 TIRAPP58753 221 aa11.48□□□□□ -0.57
SUMO1-208ENST00000409627 ESRGQ1W209 222 aa11.48□□□□□ -0.57
SUMO1-208ENST00000409627 LGALS9CQ6DKI2 356 aa11.48□□□□□ -0.57
SUMO1-208ENST00000409627 LYPD5Q6UWN5 251 aa11.48□□□□□ -0.57
SUMO1-208ENST00000409627 TMEM136Q6ZRR5 245 aa11.48□□□□□ -0.57
SUMO1-208ENST00000409627 ATP6V1G1O75348 118 aa11.47□□□□□ -0.57
SUMO1-208ENST00000409627 HLA-DQA1P01909 254 aa11.47□□□□□ -0.57
SUMO1-208ENST00000409627 CBLN2Q8IUK8 224 aa11.47□□□□□ -0.57
SUMO1-208ENST00000409627 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
SUMO1-208ENST00000409627 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
SUMO1-208ENST00000409627 GNB1LQ9BYB4 327 aa11.47□□□□□ -0.57
SUMO1-208ENST00000409627 GTSF1LQ9H1H1 148 aa11.47□□□□□ -0.57
SUMO1-208ENST00000409627 TRBV6-5A0A0K0K1A5 114 aa11.46□□□□□ -0.57
SUMO1-208ENST00000409627 GAS8-AS1O95177 125 aa11.46□□□□□ -0.57
SUMO1-208ENST00000409627 NCR2O95944 276 aa11.46□□□□□ -0.57
SUMO1-208ENST00000409627 PPP1R17O96001 155 aa11.46□□□□□ -0.57
SUMO1-208ENST00000409627 PPBPP02775 128 aa11.46□□□□□ -0.57
SUMO1-208ENST00000409627 S100A1P23297 94 aa11.46□□□□□ -0.57
SUMO1-208ENST00000409627 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.57
SUMO1-208ENST00000409627 LINC00588Q9Y4M8 146 aa11.46□□□□□ -0.57
SUMO1-208ENST00000409627 SMKR1H3BMG3 65 aa11.45□□□□□ -0.58
SUMO1-208ENST00000409627 MT-ND6P03923 174 aa11.45□□□□□ -0.58
SUMO1-208ENST00000409627 CKS2P33552 79 aa11.45□□□□□ -0.58
SUMO1-208ENST00000409627 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
SUMO1-208ENST00000409627 DAZ4Q86SG3 579 aaKnown RBP11.45□□□□□ -0.58
SUMO1-208ENST00000409627 UBE2DNLQ8IWF7 75 aa11.45□□□□□ -0.58
SUMO1-208ENST00000409627 NRACQ8N912 160 aa11.45□□□□□ -0.58
SUMO1-208ENST00000409627 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.45□□□□□ -0.58
SUMO1-208ENST00000409627 DAZ3Q9NR90 486 aaKnown RBP11.45□□□□□ -0.58
SUMO1-208ENST00000409627 MRPS16Q9Y3D3 137 aaKnown RBP11.45□□□□□ -0.58
SUMO1-208ENST00000409627 D6R8Y8 96 aa11.44□□□□□ -0.58
SUMO1-208ENST00000409627 ORMDL3Q8N138 153 aa11.44□□□□□ -0.58
SUMO1-208ENST00000409627 UPK3BQ9BT76 320 aa11.44□□□□□ -0.58
SUMO1-208ENST00000409627 ST20Q9HBF5 79 aa11.43□□□□□ -0.58
SUMO1-208ENST00000409627 ALMS1Q8TCU4 4167 aa11.43□□□□□ -0.58
SUMO1-208ENST00000409627 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
SUMO1-208ENST00000409627 LCE6AA0A183 80 aa11.42□□□□□ -0.58
SUMO1-208ENST00000409627 SDHAF1A6NFY7 115 aa11.42□□□□□ -0.58
SUMO1-208ENST00000409627 PHOX2AO14813 284 aa11.42□□□□□ -0.58
SUMO1-208ENST00000409627 LY6G6CO95867 125 aa11.42□□□□□ -0.58
SUMO1-208ENST00000409627 APCSP02743 223 aa11.42□□□□□ -0.58
SUMO1-208ENST00000409627 TMEM97Q5BJF2 176 aa11.42□□□□□ -0.58
SUMO1-208ENST00000409627 LELP1Q5T871 98 aa11.42□□□□□ -0.58
SUMO1-208ENST00000409627 TNFRSF6BO95407 300 aa11.41□□□□□ -0.58
SUMO1-208ENST00000409627 SUMO2P61956 95 aaKnown RBP11.41□□□□□ -0.58
SUMO1-208ENST00000409627 PRELID3AQ96N28 172 aa11.41□□□□□ -0.58
SUMO1-208ENST00000409627 LYSTQ99698 3801 aa11.41□□□□□ -0.58
SUMO1-208ENST00000409627 C20orf78Q9BR46 151 aa11.41□□□□□ -0.58
SUMO1-208ENST00000409627 TMEM70Q9BUB7 260 aa11.41□□□□□ -0.58
SUMO1-208ENST00000409627 LAMTOR2Q9Y2Q5 125 aa11.41□□□□□ -0.58
SUMO1-208ENST00000409627 NPYP01303 97 aa11.4□□□□□ -0.58
SUMO1-208ENST00000409627 POLR2KP53803 58 aaKnown RBP11.4□□□□□ -0.58
SUMO1-208ENST00000409627 MRPL18Q9H0U6 180 aaKnown RBP11.4□□□□□ -0.58
SUMO1-208ENST00000409627 TRBV27A0A0K0K1C4 114 aa11.39□□□□□ -0.59
SUMO1-208ENST00000409627 SCO1O75880 301 aa11.39□□□□□ -0.59
SUMO1-208ENST00000409627 RPL32P62910 135 aaKnown RBP11.39□□□□□ -0.59
SUMO1-208ENST00000409627 TRBV6-8A0A0A6YYG3 113 aa11.38□□□□□ -0.59
SUMO1-208ENST00000409627 TRAV8-6A0A0B4J262 113 aa11.38□□□□□ -0.59
SUMO1-208ENST00000409627 I3L3M4 83 aa11.38□□□□□ -0.59
SUMO1-208ENST00000409627 COTL1Q14019 142 aa11.38□□□□□ -0.59
SUMO1-208ENST00000409627 KIAA1644Q3SXP7 199 aa11.38□□□□□ -0.59
SUMO1-208ENST00000409627 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
SUMO1-208ENST00000409627 TRAPPC1Q9Y5R8 145 aa11.38□□□□□ -0.59
SUMO1-208ENST00000409627 VCYO14598 125 aa11.37□□□□□ -0.59
SUMO1-208ENST00000409627 FABP9Q0Z7S8 132 aa11.37□□□□□ -0.59
SUMO1-208ENST00000409627 IQCJQ1A5X6 159 aa11.37□□□□□ -0.59
SUMO1-208ENST00000409627 VPS13DQ5THJ4 4388 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 TRBV25-1A0A075B6N4 114 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 IGHV1-24A0A0C4DH33 117 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 COLCA2A8K830 154 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 PMCHP20382 165 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 WFDC10BQ8IUB3 73 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 SMIM2Q9BVW6 85 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 Q9H8V8 135 aa11.36□□□□□ -0.59
SUMO1-208ENST00000409627 DNAH1Q9P2D7 4330 aa11.35□□□□□ -0.59
SUMO1-208ENST00000409627 SIVA1O15304 175 aa11.35□□□□□ -0.59
SUMO1-208ENST00000409627 ALKBH7Q9BT30 221 aaPredicted RBP11.35□□□□□ -0.59
SUMO1-208ENST00000409627 MAP1LC3AQ9H492 121 aa11.35□□□□□ -0.59
SUMO1-208ENST00000409627 TSHBP01222 138 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms