RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 Q6ZSA8 131 aa13.92□□□□□ -0.18
RHBDD3-202ENST00000406335 OR2D3Q8NGH3 330 aa13.92□□□□□ -0.18
RHBDD3-202ENST00000406335 DAZAP1Q96EP5 407 aaKnown RBP13.92□□□□□ -0.18
RHBDD3-202ENST00000406335 TRBV10-1A0A0K0K1A3 114 aa13.91□□□□□ -0.18
RHBDD3-202ENST00000406335 NKX2-5P52952 324 aaPredicted RBP13.91□□□□□ -0.18
RHBDD3-202ENST00000406335 RAB4BP61018 213 aa13.91□□□□□ -0.18
RHBDD3-202ENST00000406335 LINC01620Q4KN68 170 aa13.91□□□□□ -0.18
RHBDD3-202ENST00000406335 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
RHBDD3-202ENST00000406335 A0A087WWC5 75 aa13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 UBE2D3P61077 147 aa13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 UBE2D2P62837 147 aa13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 RPL36AP83881 106 aaKnown RBP13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 SCXQ7RTU7 201 aa13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 DAZ4Q86SG3 579 aaKnown RBP13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 NEXN-AS1Q8NBZ9 246 aa13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 RPL36ALQ969Q0 106 aaKnown RBP13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 SMIM12Q96EX1 92 aa13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 DAZ3Q9NR90 486 aaKnown RBP13.9□□□□□ -0.18
RHBDD3-202ENST00000406335 TRBV7-3A0A075B6L6 115 aa13.89□□□□□ -0.19
RHBDD3-202ENST00000406335 IGLC6P0CF74 106 aa13.89□□□□□ -0.19
RHBDD3-202ENST00000406335 FER1L6-AS1Q8NA97 138 aa13.89□□□□□ -0.19
RHBDD3-202ENST00000406335 TPPP3Q9BW30 176 aa13.89□□□□□ -0.19
RHBDD3-202ENST00000406335 COX11Q9Y6N1 276 aa13.89□□□□□ -0.19
RHBDD3-202ENST00000406335 OXTP01178 125 aa13.88□□□□□ -0.19
RHBDD3-202ENST00000406335 TAGLN2P37802 199 aaKnown RBP13.88□□□□□ -0.19
RHBDD3-202ENST00000406335 OR10G8Q8NGN5 311 aa13.88□□□□□ -0.19
RHBDD3-202ENST00000406335 KIF25-AS1Q9Y6Z4 181 aa13.88□□□□□ -0.19
RHBDD3-202ENST00000406335 F5H697 171 aa13.87□□□□□ -0.19
RHBDD3-202ENST00000406335 P01737 135 aa13.87□□□□□ -0.19
RHBDD3-202ENST00000406335 RPS20P60866 119 aaKnown RBP13.87□□□□□ -0.19
RHBDD3-202ENST00000406335 BLOC1S1P78537 153 aa13.87□□□□□ -0.19
RHBDD3-202ENST00000406335 RMI2Q96E14 147 aa13.87□□□□□ -0.19
RHBDD3-202ENST00000406335 URGCP-MRPS24S4R325 110 aa13.87□□□□□ -0.19
RHBDD3-202ENST00000406335 NIT1Q86X76 327 aa13.86□□□□□ -0.19
RHBDD3-202ENST00000406335 Q8N976 141 aa13.86□□□□□ -0.19
RHBDD3-202ENST00000406335 AP1S3Q96PC3 154 aa13.86□□□□□ -0.19
RHBDD3-202ENST00000406335 NUDT10Q8NFP7 164 aa13.85□□□□□ -0.19
RHBDD3-202ENST00000406335 LYPD6BQ8NI32 183 aa13.85□□□□□ -0.19
RHBDD3-202ENST00000406335 OCC1Q8TAD7 63 aa13.85□□□□□ -0.19
RHBDD3-202ENST00000406335 NUDT11Q96G61 164 aa13.85□□□□□ -0.19
RHBDD3-202ENST00000406335 CHAC1Q9BUX1 264 aa13.85□□□□□ -0.19
RHBDD3-202ENST00000406335 IGKV2D-24A0A075B6R9 120 aa13.84□□□□□ -0.19
RHBDD3-202ENST00000406335 K7EN84 100 aa13.84□□□□□ -0.19
RHBDD3-202ENST00000406335 SMIM17P0DL12 118 aa13.84□□□□□ -0.19
RHBDD3-202ENST00000406335 BIN3Q9NQY0 253 aa13.84□□□□□ -0.19
RHBDD3-202ENST00000406335 DNAH8Q96JB1 4490 aa13.84□□□□□ -0.19
RHBDD3-202ENST00000406335 LYZL1Q6UWQ5 148 aa13.83□□□□□ -0.2
RHBDD3-202ENST00000406335 DNAJC30Q96LL9 226 aa13.83□□□□□ -0.2
RHBDD3-202ENST00000406335 RNASE7Q9H1E1 156 aaKnown RBP13.83□□□□□ -0.2
RHBDD3-202ENST00000406335 XKRY2A2RUG3 117 aa13.82□□□□□ -0.2
RHBDD3-202ENST00000406335 MGPP08493 103 aa13.82□□□□□ -0.2
RHBDD3-202ENST00000406335 CACNG7P62955 275 aa13.82□□□□□ -0.2
RHBDD3-202ENST00000406335 CIRBP-AS1Q8TBR5 109 aa13.82□□□□□ -0.2
RHBDD3-202ENST00000406335 KLK12Q9UKR0 248 aa13.81□□□□□ -0.2
RHBDD3-202ENST00000406335 HMCN2Q8NDA2 5059 aa13.8□□□□□ -0.2
RHBDD3-202ENST00000406335 TRBV6-8A0A0A6YYG3 113 aa13.8□□□□□ -0.2
RHBDD3-202ENST00000406335 F2Z2F3 143 aa13.8□□□□□ -0.2
RHBDD3-202ENST00000406335 TMEM250H0YL14 139 aa13.8□□□□□ -0.2
RHBDD3-202ENST00000406335 KCNIP4Q6PIL6 250 aa13.8□□□□□ -0.2
RHBDD3-202ENST00000406335 UBR4Q5T4S7 5183 aa13.79□□□□□ -0.2
RHBDD3-202ENST00000406335 NTF3P20783 257 aa13.79□□□□□ -0.2
RHBDD3-202ENST00000406335 SUMO4Q6EEV6 95 aa13.79□□□□□ -0.2
RHBDD3-202ENST00000406335 RPP21Q9H633 154 aaKnown RBP13.79□□□□□ -0.2
RHBDD3-202ENST00000406335 A0A087WX48 190 aa13.78□□□□□ -0.2
RHBDD3-202ENST00000406335 M0QY20 66 aa13.78□□□□□ -0.2
RHBDD3-202ENST00000406335 CEBPGP53567 150 aa13.78□□□□□ -0.2
RHBDD3-202ENST00000406335 NTM-AS1Q6ZSK4 140 aa13.78□□□□□ -0.2
RHBDD3-202ENST00000406335 TMEM262E9PQX1 116 aa13.77□□□□□ -0.21
RHBDD3-202ENST00000406335 CTRLP40313 264 aa13.77□□□□□ -0.21
RHBDD3-202ENST00000406335 UBE2WQ96B02 151 aa13.77□□□□□ -0.21
RHBDD3-202ENST00000406335 CHCHD7Q9BUK0 85 aa13.77□□□□□ -0.21
RHBDD3-202ENST00000406335 TRGC1P0CF51 173 aa13.76□□□□□ -0.21
RHBDD3-202ENST00000406335 RPL37AP61513 92 aaKnown RBP13.76□□□□□ -0.21
RHBDD3-202ENST00000406335 MPV17L2Q567V2 206 aa13.75□□□□□ -0.21
RHBDD3-202ENST00000406335 WDR73Q6P4I2 378 aa13.75□□□□□ -0.21
RHBDD3-202ENST00000406335 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.75□□□□□ -0.21
RHBDD3-202ENST00000406335 EIF5A2Q9GZV4 153 aaKnown RBP13.75□□□□□ -0.21
RHBDD3-202ENST00000406335 DPH3P1Q9H4G8 78 aa13.75□□□□□ -0.21
RHBDD3-202ENST00000406335 KRTAP10-4P60372 401 aaPredicted RBP13.74□□□□□ -0.21
RHBDD3-202ENST00000406335 ELOBQ15370 118 aa13.74□□□□□ -0.21
RHBDD3-202ENST00000406335 GTSF1Q8WW33 167 aa13.74□□□□□ -0.21
RHBDD3-202ENST00000406335 FAM210AQ96ND0 272 aa13.74□□□□□ -0.21
RHBDD3-202ENST00000406335 CHCHD5Q9BSY4 110 aa13.74□□□□□ -0.21
RHBDD3-202ENST00000406335 CNFNQ9BYD5 112 aa13.74□□□□□ -0.21
RHBDD3-202ENST00000406335 H7C1H1 209 aa13.73□□□□□ -0.21
RHBDD3-202ENST00000406335 GATCO43716 136 aaKnown RBP13.73□□□□□ -0.21
RHBDD3-202ENST00000406335 TWIST1Q15672 202 aa13.73□□□□□ -0.21
RHBDD3-202ENST00000406335 C15orf54Q8N8G6 183 aa13.73□□□□□ -0.21
RHBDD3-202ENST00000406335 C14orf177Q52M58 125 aa13.72□□□□□ -0.21
RHBDD3-202ENST00000406335 RASL11AQ6T310 242 aa13.72□□□□□ -0.21
RHBDD3-202ENST00000406335 ATRAIDQ6UW56 229 aa13.72□□□□□ -0.21
RHBDD3-202ENST00000406335 SMIM7Q9BQ49 75 aa13.72□□□□□ -0.21
RHBDD3-202ENST00000406335 LRP1Q07954 4544 aaKnown RBP13.71□□□□□ -0.21
RHBDD3-202ENST00000406335 SRP19P09132 144 aaKnown RBP13.71□□□□□ -0.21
RHBDD3-202ENST00000406335 TMEM97Q5BJF2 176 aa13.71□□□□□ -0.21
RHBDD3-202ENST00000406335 ENHOQ6UWT2 76 aa13.71□□□□□ -0.21
RHBDD3-202ENST00000406335 FAM231DQ6ZW35 169 aa13.71□□□□□ -0.21
RHBDD3-202ENST00000406335 ANGP03950 147 aaKnown RBP13.7□□□□□ -0.22
RHBDD3-202ENST00000406335 GAGE6Q13070 117 aa13.7□□□□□ -0.22
RHBDD3-202ENST00000406335 TRBV25-1A0A075B6N4 114 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms