RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 S100A8P05109 93 aa20.25■□□□□ 0.83
USP42-202ENST00000404008 RPL36AP83881 106 aaKnown RBP20.25■□□□□ 0.83
USP42-202ENST00000404008 LYPD5Q6UWN5 251 aa20.25■□□□□ 0.83
USP42-202ENST00000404008 UBE2DNLQ8IWF7 75 aa20.25■□□□□ 0.83
USP42-202ENST00000404008 ZNRF2Q8NHG8 242 aa20.25■□□□□ 0.83
USP42-202ENST00000404008 RPL36ALQ969Q0 106 aaKnown RBP20.25■□□□□ 0.83
USP42-202ENST00000404008 TRBV7-3A0A075B6L6 115 aa20.24■□□□□ 0.83
USP42-202ENST00000404008 TRAV26-2A0A0B4J265 109 aa20.24■□□□□ 0.83
USP42-202ENST00000404008 AMN1Q8IY45 258 aa20.24■□□□□ 0.83
USP42-202ENST00000404008 GATD1Q8NB37 220 aa20.24■□□□□ 0.83
USP42-202ENST00000404008 RNF185Q96GF1 192 aa20.24■□□□□ 0.83
USP42-202ENST00000404008 SACSQ9NZJ4 4579 aa20.24■□□□□ 0.83
USP42-202ENST00000404008 RAB4AP20338 218 aa20.23■□□□□ 0.83
USP42-202ENST00000404008 RASL11AQ6T310 242 aa20.23■□□□□ 0.83
USP42-202ENST00000404008 ATP6V0E2Q8NHE4 81 aa20.23■□□□□ 0.83
USP42-202ENST00000404008 S100PP25815 95 aa20.22■□□□□ 0.83
USP42-202ENST00000404008 TRAV9-1A0A075B6T8 112 aa20.21■□□□□ 0.83
USP42-202ENST00000404008 UBE2D3P61077 147 aa20.21■□□□□ 0.83
USP42-202ENST00000404008 UBE2D2P62837 147 aa20.21■□□□□ 0.83
USP42-202ENST00000404008 FRZBQ92765 325 aa20.21■□□□□ 0.83
USP42-202ENST00000404008 FAM104BQ5XKR9 115 aa20.21■□□□□ 0.83
USP42-202ENST00000404008 DNAJC30Q96LL9 226 aa20.21■□□□□ 0.83
USP42-202ENST00000404008 URGCP-MRPS24S4R325 110 aa20.21■□□□□ 0.83
USP42-202ENST00000404008 NIT2Q9NQR4 276 aa20.2■□□□□ 0.82
USP42-202ENST00000404008 MRPS16Q9Y3D3 137 aaKnown RBP20.2■□□□□ 0.82
USP42-202ENST00000404008 TIRAPP58753 221 aa20.19■□□□□ 0.82
USP42-202ENST00000404008 GTSF1LQ9H1H1 148 aa20.19■□□□□ 0.82
USP42-202ENST00000404008 ATRAIDQ6UW56 229 aa20.18■□□□□ 0.82
USP42-202ENST00000404008 MRAP2Q96G30 205 aa20.18■□□□□ 0.82
USP42-202ENST00000404008 TNFRSF18Q9Y5U5 241 aa20.18■□□□□ 0.82
USP42-202ENST00000404008 KMT2AQ03164 3969 aa20.17■□□□□ 0.82
USP42-202ENST00000404008 UPK3BQ9BT76 320 aa20.17■□□□□ 0.82
USP42-202ENST00000404008 GAS8-AS1O95177 125 aa20.16■□□□□ 0.82
USP42-202ENST00000404008 MRPL51Q4U2R6 128 aaKnown RBP20.16■□□□□ 0.82
USP42-202ENST00000404008 RPL39LQ96EH5 51 aaKnown RBP20.16■□□□□ 0.82
USP42-202ENST00000404008 HYDINQ4G0P3 5121 aa20.14■□□□□ 0.82
USP42-202ENST00000404008 DNAH6Q9C0G6 4158 aa20.13■□□□□ 0.81
USP42-202ENST00000404008 DAZ4Q86SG3 579 aaKnown RBP20.12■□□□□ 0.81
USP42-202ENST00000404008 DAZ3Q9NR90 486 aaKnown RBP20.12■□□□□ 0.81
USP42-202ENST00000404008 IGHV3-38A0A0C4DH36 116 aa20.11■□□□□ 0.81
USP42-202ENST00000404008 SMKR1H3BMG3 65 aa20.11■□□□□ 0.81
USP42-202ENST00000404008 NCR2O95944 276 aa20.11■□□□□ 0.81
USP42-202ENST00000404008 RPS10P46783 165 aaKnown RBP20.11■□□□□ 0.81
USP42-202ENST00000404008 OR10J3Q5JRS4 329 aa20.11■□□□□ 0.81
USP42-202ENST00000404008 LELP1Q5T871 98 aa20.1■□□□□ 0.81
USP42-202ENST00000404008 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.1■□□□□ 0.81
USP42-202ENST00000404008 RYR2Q92736 4967 aa20.1■□□□□ 0.81
USP42-202ENST00000404008 TRBV6-5A0A0K0K1A5 114 aa20.09■□□□□ 0.81
USP42-202ENST00000404008 TMEM136Q6ZRR5 245 aa20.09■□□□□ 0.81
USP42-202ENST00000404008 ELOBQ15370 118 aa20.08■□□□□ 0.81
USP42-202ENST00000404008 NRACQ8N912 160 aa20.08■□□□□ 0.81
USP42-202ENST00000404008 Q9H8V8 135 aa20.08■□□□□ 0.81
USP42-202ENST00000404008 CKS2P33552 79 aa20.08■□□□□ 0.8
USP42-202ENST00000404008 WFDC10BQ8IUB3 73 aa20.07■□□□□ 0.8
USP42-202ENST00000404008 D6R8Y8 96 aa20.06■□□□□ 0.8
USP42-202ENST00000404008 PPP1R17O96001 155 aa20.06■□□□□ 0.8
USP42-202ENST00000404008 ST20Q9HBF5 79 aa20.06■□□□□ 0.8
USP42-202ENST00000404008 TGIF2-C20orf24A0A0A6YYL0 155 aa20.05■□□□□ 0.8
USP42-202ENST00000404008 TRAV8-6A0A0B4J262 113 aa20.05■□□□□ 0.8
USP42-202ENST00000404008 SDHAF1A6NFY7 115 aa20.05■□□□□ 0.8
USP42-202ENST00000404008 SIVA1O15304 175 aa20.05■□□□□ 0.8
USP42-202ENST00000404008 PPBPP02775 128 aa20.05■□□□□ 0.8
USP42-202ENST00000404008 GNB1LQ9BYB4 327 aa20.05■□□□□ 0.8
USP42-202ENST00000404008 IGLV2-18A0A075B6J9 118 aa20.04■□□□□ 0.8
USP42-202ENST00000404008 TRBV6-8A0A0A6YYG3 113 aa20.04■□□□□ 0.8
USP42-202ENST00000404008 TMEM97Q5BJF2 176 aa20.04■□□□□ 0.8
USP42-202ENST00000404008 YPEL4Q96NS1 127 aa20.04■□□□□ 0.8
USP42-202ENST00000404008 TRBV24-1A0A075B6N3 115 aa20.03■□□□□ 0.8
USP42-202ENST00000404008 COX19Q49B96 90 aa20.03■□□□□ 0.8
USP42-202ENST00000404008 NTM-AS1Q6ZSK4 140 aa20.03■□□□□ 0.8
USP42-202ENST00000404008 CBLN2Q8IUK8 224 aa20.03■□□□□ 0.8
USP42-202ENST00000404008 SMCO4Q9NRQ5 59 aa20.03■□□□□ 0.8
USP42-202ENST00000404008 HLA-DQA1P01909 254 aa20.02■□□□□ 0.8
USP42-202ENST00000404008 ORMDL3Q8N138 153 aa20.02■□□□□ 0.8
USP42-202ENST00000404008 TMEM70Q9BUB7 260 aa20.02■□□□□ 0.8
USP42-202ENST00000404008 RYR3Q15413 4870 aa20.02■□□□□ 0.8
USP42-202ENST00000404008 TNFRSF6BO95407 300 aa20■□□□□ 0.79
USP42-202ENST00000404008 POLR2KP53803 58 aaKnown RBP20■□□□□ 0.79
USP42-202ENST00000404008 DNAH10OSP0CZ25 163 aa19.99■□□□□ 0.79
USP42-202ENST00000404008 SUMO2P61956 95 aaKnown RBP19.99■□□□□ 0.79
USP42-202ENST00000404008 I3L3M4 83 aa19.98■□□□□ 0.79
USP42-202ENST00000404008 NPYP01303 97 aa19.98■□□□□ 0.79
USP42-202ENST00000404008 APCSP02743 223 aa19.98■□□□□ 0.79
USP42-202ENST00000404008 PRELID3AQ96N28 172 aa19.98■□□□□ 0.79
USP42-202ENST00000404008 C20orf78Q9BR46 151 aa19.98■□□□□ 0.79
USP42-202ENST00000404008 TRBV27A0A0K0K1C4 114 aa19.97■□□□□ 0.79
USP42-202ENST00000404008 NBDYA0A0U1RRE5 68 aa19.97■□□□□ 0.79
USP42-202ENST00000404008 PHOX2AO14813 284 aa19.97■□□□□ 0.79
USP42-202ENST00000404008 MT-ND6P03923 174 aa19.97■□□□□ 0.79
USP42-202ENST00000404008 COTL1Q14019 142 aa19.97■□□□□ 0.79
USP42-202ENST00000404008 IQCJQ1A5X6 159 aa19.97■□□□□ 0.79
USP42-202ENST00000404008 DEFB104AQ8WTQ1 72 aa19.97■□□□□ 0.79
USP42-202ENST00000404008 TRBV25-1A0A075B6N4 114 aa19.96■□□□□ 0.79
USP42-202ENST00000404008 IGHV1-24A0A0C4DH33 117 aa19.95■□□□□ 0.79
USP42-202ENST00000404008 M0R2N4 97 aa19.95■□□□□ 0.79
USP42-202ENST00000404008 PMCHP20382 165 aa19.95■□□□□ 0.79
USP42-202ENST00000404008 LINC01556Q5JQF7 62 aa19.95■□□□□ 0.79
USP42-202ENST00000404008 Q6ZR54 194 aa19.95■□□□□ 0.79
USP42-202ENST00000404008 LAMTOR2Q9Y2Q5 125 aa19.95■□□□□ 0.79
USP42-202ENST00000404008 VCYO14598 125 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms