RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 LTBP2Q14767 1821 aa11.23□□□□□ -0.61
TNRC18-203ENST00000399537 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
TNRC18-203ENST00000399537 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
TNRC18-203ENST00000399537 SLX1AQ9BQ83 275 aa11.22□□□□□ -0.61
TNRC18-203ENST00000399537 FAM215AQ9Y5M1 114 aa11.22□□□□□ -0.61
TNRC18-203ENST00000399537 IGLV3-1P01715 115 aa11.21□□□□□ -0.61
TNRC18-203ENST00000399537 LINC01620Q4KN68 170 aa11.21□□□□□ -0.61
TNRC18-203ENST00000399537 NUPR1O60356 82 aa11.21□□□□□ -0.61
TNRC18-203ENST00000399537 KAAG1Q9UBP8 84 aa11.21□□□□□ -0.62
TNRC18-203ENST00000399537 V9GYY9 64 aa11.21□□□□□ -0.62
TNRC18-203ENST00000399537 TRBV7-3A0A075B6L6 115 aa11.2□□□□□ -0.62
TNRC18-203ENST00000399537 H0Y9J4 135 aa11.2□□□□□ -0.62
TNRC18-203ENST00000399537 A4D1N5 150 aa11.2□□□□□ -0.62
TNRC18-203ENST00000399537 RNASE8Q8TDE3 154 aaKnown RBP11.2□□□□□ -0.62
TNRC18-203ENST00000399537 LGALS9O00182 355 aa11.19□□□□□ -0.62
TNRC18-203ENST00000399537 TEN1Q86WV5 123 aa11.19□□□□□ -0.62
TNRC18-203ENST00000399537 NPBQ8NG41 125 aa11.19□□□□□ -0.62
TNRC18-203ENST00000399537 IGHV4-38-2P0DP08 117 aa11.19□□□□□ -0.62
TNRC18-203ENST00000399537 ANKRD39Q53RE8 183 aa11.19□□□□□ -0.62
TNRC18-203ENST00000399537 TM2D2Q9BX73 214 aa11.18□□□□□ -0.62
TNRC18-203ENST00000399537 CLEC2BQ92478 149 aa11.18□□□□□ -0.62
TNRC18-203ENST00000399537 IGKV4-1P06312 121 aa11.18□□□□□ -0.62
TNRC18-203ENST00000399537 FXYD2P54710 66 aa11.18□□□□□ -0.62
TNRC18-203ENST00000399537 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
TNRC18-203ENST00000399537 TRBV12-3P01733 135 aa11.18□□□□□ -0.62
TNRC18-203ENST00000399537 CRYGBP07316 175 aa11.18□□□□□ -0.62
TNRC18-203ENST00000399537 HHLA3Q9XRX5 114 aa11.17□□□□□ -0.62
TNRC18-203ENST00000399537 PRSS33Q8NF86 280 aa11.17□□□□□ -0.62
TNRC18-203ENST00000399537 RNF183Q96D59 192 aa11.17□□□□□ -0.62
TNRC18-203ENST00000399537 Q8N1Y9 231 aa11.17□□□□□ -0.62
TNRC18-203ENST00000399537 B9D2Q9BPU9 175 aa11.17□□□□□ -0.62
TNRC18-203ENST00000399537 DIRC1Q969H9 104 aa11.16□□□□□ -0.62
TNRC18-203ENST00000399537 ESM1Q9NQ30 184 aa11.16□□□□□ -0.62
TNRC18-203ENST00000399537 RITA1Q96K30 269 aa11.16□□□□□ -0.62
TNRC18-203ENST00000399537 GRNP28799 593 aaKnown RBP11.16□□□□□ -0.62
TNRC18-203ENST00000399537 A0A0J9YXV3 536 aa11.15□□□□□ -0.62
TNRC18-203ENST00000399537 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
TNRC18-203ENST00000399537 TOMM6Q96B49 74 aa11.15□□□□□ -0.62
TNRC18-203ENST00000399537 PLA2G2EQ9NZK7 142 aa11.15□□□□□ -0.62
TNRC18-203ENST00000399537 PRRC2CQ9Y520 2896 aaKnown RBP11.15□□□□□ -0.62
TNRC18-203ENST00000399537 IGHV7-81A0A0B4J1V7 117 aa11.15□□□□□ -0.62
TNRC18-203ENST00000399537 CXCL5P42830 114 aa11.15□□□□□ -0.62
TNRC18-203ENST00000399537 DEFB135Q30KP9 77 aa11.15□□□□□ -0.62
TNRC18-203ENST00000399537 HIGD1BQ9P298 99 aa11.15□□□□□ -0.62
TNRC18-203ENST00000399537 LECT2O14960 151 aa11.15□□□□□ -0.63
TNRC18-203ENST00000399537 DEFB4AO15263 64 aa11.15□□□□□ -0.63
TNRC18-203ENST00000399537 C11orf53Q8IXP5 236 aa11.15□□□□□ -0.63
TNRC18-203ENST00000399537 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.63
TNRC18-203ENST00000399537 CENPVL3A0A0U1RRI6 287 aa11.14□□□□□ -0.63
TNRC18-203ENST00000399537 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
TNRC18-203ENST00000399537 A0A087WW49 117 aa11.14□□□□□ -0.63
TNRC18-203ENST00000399537 AJUBAQ96IF1 538 aa11.14□□□□□ -0.63
TNRC18-203ENST00000399537 CTSZQ9UBR2 303 aa11.14□□□□□ -0.63
TNRC18-203ENST00000399537 WFDC2Q14508 124 aa11.14□□□□□ -0.63
TNRC18-203ENST00000399537 I3L2K1 104 aa11.14□□□□□ -0.63
TNRC18-203ENST00000399537 DEFB113Q30KQ7 82 aa11.14□□□□□ -0.63
TNRC18-203ENST00000399537 K7EIM0 57 aa11.13□□□□□ -0.63
TNRC18-203ENST00000399537 C4orf3Q8WVX3 66 aa11.13□□□□□ -0.63
TNRC18-203ENST00000399537 GTSF1Q8WW33 167 aa11.13□□□□□ -0.63
TNRC18-203ENST00000399537 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
TNRC18-203ENST00000399537 SPAG11BQ08648 103 aa11.13□□□□□ -0.63
TNRC18-203ENST00000399537 TAX1BP3O14907 124 aa11.13□□□□□ -0.63
TNRC18-203ENST00000399537 FGF23Q9GZV9 251 aaPredicted RBP11.13□□□□□ -0.63
TNRC18-203ENST00000399537 C16orf54Q6UWD8 224 aa11.13□□□□□ -0.63
TNRC18-203ENST00000399537 USP24Q9UPU5 2620 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 CTRLP40313 264 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 C5orf56Q8N8D9 126 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 FAM110AQ9BQ89 295 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 RNF138Q8WVD3 245 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 COX7BP24311 80 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 SPRNQ5BIV9 151 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 KLK5Q9Y337 293 aaPredicted RBP11.12□□□□□ -0.63
TNRC18-203ENST00000399537 TRBV10-2A0A0K0K1G8 114 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 Q8NFD4 153 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
TNRC18-203ENST00000399537 IGLV11-55A0A075B6I3 123 aa11.11□□□□□ -0.63
TNRC18-203ENST00000399537 TMEM256-PLSCR3K7ERE1 68 aa11.11□□□□□ -0.63
TNRC18-203ENST00000399537 IGHV4-30-2A0A087WSY4 118 aa11.11□□□□□ -0.63
TNRC18-203ENST00000399537 UPK3BQ9BT76 320 aa11.11□□□□□ -0.63
TNRC18-203ENST00000399537 JMJD7-PLA2G4BH0Y9G9 81 aa11.11□□□□□ -0.63
TNRC18-203ENST00000399537 FAM167A-AS1Q96KT0 104 aa11.11□□□□□ -0.63
TNRC18-203ENST00000399537 IGHV4-61A0A0C4DH41 118 aa11.1□□□□□ -0.63
TNRC18-203ENST00000399537 CTSGP08311 255 aa11.1□□□□□ -0.63
TNRC18-203ENST00000399537 SPTSSBQ8NFR3 76 aa11.1□□□□□ -0.63
TNRC18-203ENST00000399537 COL5A1P20908 1838 aaPredicted RBP11.1□□□□□ -0.63
TNRC18-203ENST00000399537 KRTAP27-1Q3LI81 207 aa11.1□□□□□ -0.63
TNRC18-203ENST00000399537 BRK1Q8WUW1 75 aa11.1□□□□□ -0.63
TNRC18-203ENST00000399537 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
TNRC18-203ENST00000399537 BLCAPP62952 87 aa11.09□□□□□ -0.63
TNRC18-203ENST00000399537 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
TNRC18-203ENST00000399537 POLQO75417 2590 aa11.09□□□□□ -0.63
TNRC18-203ENST00000399537 WI2-2373I1.2A0A1W2PRP0 233 aa11.09□□□□□ -0.63
TNRC18-203ENST00000399537 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
TNRC18-203ENST00000399537 PDE6GP18545 87 aa11.09□□□□□ -0.63
TNRC18-203ENST00000399537 G3V4G9 280 aa11.08□□□□□ -0.64
TNRC18-203ENST00000399537 CASC2Q6XLA1 102 aa11.08□□□□□ -0.64
TNRC18-203ENST00000399537 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
TNRC18-203ENST00000399537 FOXI1Q12951 378 aa11.08□□□□□ -0.64
TNRC18-203ENST00000399537 ODF1Q14990 250 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms