RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TRBV10-1A0A0K0K1A3 114 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 F5H697 171 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 LY6G6CO95867 125 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 SRIP30626 198 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 NDUFA5Q16718 116 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 ATRAIDQ6UW56 229 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 LYPD5Q6UWN5 251 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 NEGR1Q7Z3B1 354 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 GATD1Q8NB37 220 aa8.54□□□□□ -1.04
HLA-DQB1-203ENST00000399082 CAMPP49913 170 aa8.53□□□□□ -1.04
HLA-DQB1-203ENST00000399082 HBBP68871 147 aa8.53□□□□□ -1.04
HLA-DQB1-203ENST00000399082 IMMP2LQ96T52 175 aa8.53□□□□□ -1.04
HLA-DQB1-203ENST00000399082 RPS10P5Q9NQ39 176 aa8.53□□□□□ -1.04
HLA-DQB1-203ENST00000399082 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
HLA-DQB1-203ENST00000399082 RAB4AP20338 218 aa8.52□□□□□ -1.05
HLA-DQB1-203ENST00000399082 UBE2D3P61077 147 aa8.52□□□□□ -1.05
HLA-DQB1-203ENST00000399082 UBE2D2P62837 147 aa8.52□□□□□ -1.05
HLA-DQB1-203ENST00000399082 ATP5L2Q7Z4Y8 100 aa8.52□□□□□ -1.05
HLA-DQB1-203ENST00000399082 SVBPQ8N300 66 aa8.52□□□□□ -1.05
HLA-DQB1-203ENST00000399082 ZNRF2Q8NHG8 242 aa8.52□□□□□ -1.05
HLA-DQB1-203ENST00000399082 MRPS16Q9Y3D3 137 aaKnown RBP8.52□□□□□ -1.05
HLA-DQB1-203ENST00000399082 TRBV7-3A0A075B6L6 115 aa8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 A0A1B0GW15 77 aa8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 TIRAPP58753 221 aa8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 XP32Q5T750 250 aa8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 FAM104BQ5XKR9 115 aa8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 RASL11AQ6T310 242 aa8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 SMIM15Q7Z3B0 74 aa8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 ATP6V0E2Q8NHE4 81 aa8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 RPL39LQ96EH5 51 aaKnown RBP8.51□□□□□ -1.05
HLA-DQB1-203ENST00000399082 SMKR1H3BMG3 65 aa8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 SNAPINO95295 136 aa8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 RPS10P46783 165 aaKnown RBP8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 CCL18P55774 89 aa8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 RPL36AP83881 106 aaKnown RBP8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 SH2D6Q7Z4S9 175 aa8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 RPL36ALQ969Q0 106 aaKnown RBP8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 BTF3L4Q96K17 158 aa8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 UPK3BQ9BT76 320 aa8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 URGCP-MRPS24S4R325 110 aa8.5□□□□□ -1.05
HLA-DQB1-203ENST00000399082 IGHV3-38A0A0C4DH36 116 aa8.49□□□□□ -1.05
HLA-DQB1-203ENST00000399082 H7C1H1 209 aa8.49□□□□□ -1.05
HLA-DQB1-203ENST00000399082 NCR2O95944 276 aa8.49□□□□□ -1.05
HLA-DQB1-203ENST00000399082 UBE2DNLQ8IWF7 75 aa8.49□□□□□ -1.05
HLA-DQB1-203ENST00000399082 GTSF1LQ9H1H1 148 aa8.49□□□□□ -1.05
HLA-DQB1-203ENST00000399082 NIT2Q9NQR4 276 aa8.49□□□□□ -1.05
HLA-DQB1-203ENST00000399082 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
HLA-DQB1-203ENST00000399082 TRAV9-1A0A075B6T8 112 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 KCNIP4Q6PIL6 250 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 WFDC10BQ8IUB3 73 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 NRACQ8N912 160 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 FRZBQ92765 325 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 DNAJC30Q96LL9 226 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 YPEL4Q96NS1 127 aa8.48□□□□□ -1.05
HLA-DQB1-203ENST00000399082 TRBV6-5A0A0K0K1A5 114 aa8.47□□□□□ -1.05
HLA-DQB1-203ENST00000399082 S100A8P05109 93 aa8.47□□□□□ -1.05
HLA-DQB1-203ENST00000399082 LELP1Q5T871 98 aa8.47□□□□□ -1.05
HLA-DQB1-203ENST00000399082 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
HLA-DQB1-203ENST00000399082 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
HLA-DQB1-203ENST00000399082 IGLV2-18A0A075B6J9 118 aa8.46□□□□□ -1.06
HLA-DQB1-203ENST00000399082 S100PP25815 95 aa8.46□□□□□ -1.06
HLA-DQB1-203ENST00000399082 ELOBQ15370 118 aa8.46□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TNFRSF18Q9Y5U5 241 aa8.46□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TGIF2-C20orf24A0A0A6YYL0 155 aa8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 OR10J3Q5JRS4 329 aa8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 Q6ZR54 194 aa8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 DAZ4Q86SG3 579 aaKnown RBP8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 CBLN2Q8IUK8 224 aa8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 Q8N3U1 123 aa8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 DEFB104AQ8WTQ1 72 aa8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 Q9H8V8 135 aa8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 DAZ3Q9NR90 486 aaKnown RBP8.45□□□□□ -1.06
HLA-DQB1-203ENST00000399082 DNAH2Q9P225 4427 aa8.44□□□□□ -1.06
HLA-DQB1-203ENST00000399082 SDHAF1A6NFY7 115 aa8.44□□□□□ -1.06
HLA-DQB1-203ENST00000399082 D6R8Y8 96 aa8.44□□□□□ -1.06
HLA-DQB1-203ENST00000399082 NPYP01303 97 aa8.44□□□□□ -1.06
HLA-DQB1-203ENST00000399082 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TRBV24-1A0A075B6N3 115 aa8.43□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
HLA-DQB1-203ENST00000399082 SIVA1O15304 175 aa8.43□□□□□ -1.06
HLA-DQB1-203ENST00000399082 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
HLA-DQB1-203ENST00000399082 CKS2P33552 79 aa8.43□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TMEM70Q9BUB7 260 aa8.43□□□□□ -1.06
HLA-DQB1-203ENST00000399082 DNAH10Q8IVF4 4471 aa8.43□□□□□ -1.06
HLA-DQB1-203ENST00000399082 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
HLA-DQB1-203ENST00000399082 M0R2N4 97 aa8.42□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
HLA-DQB1-203ENST00000399082 IQCJQ1A5X6 159 aa8.42□□□□□ -1.06
HLA-DQB1-203ENST00000399082 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
HLA-DQB1-203ENST00000399082 FRAS1Q86XX4 4008 aa8.42□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TRAV8-6A0A0B4J262 113 aa8.41□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TRBV27A0A0K0K1C4 114 aa8.41□□□□□ -1.06
HLA-DQB1-203ENST00000399082 TSHBP01222 138 aa8.41□□□□□ -1.06
HLA-DQB1-203ENST00000399082 PPBPP02775 128 aa8.41□□□□□ -1.06
HLA-DQB1-203ENST00000399082 SUMO2P61956 95 aaKnown RBP8.41□□□□□ -1.06
HLA-DQB1-203ENST00000399082 KIAA1644Q3SXP7 199 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms