RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SMIM17P0DL12 118 aa11.16□□□□□ -0.62
APTR-201ENST00000398043 CEBPGP53567 150 aa11.16□□□□□ -0.62
APTR-201ENST00000398043 ERVFC1-1P60608 527 aa11.16□□□□□ -0.62
APTR-201ENST00000398043 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
APTR-201ENST00000398043 DAZ4Q86SG3 579 aaKnown RBP11.16□□□□□ -0.62
APTR-201ENST00000398043 DAZ3Q9NR90 486 aaKnown RBP11.16□□□□□ -0.62
APTR-201ENST00000398043 LRP1BQ9NZR2 4599 aa11.15□□□□□ -0.62
APTR-201ENST00000398043 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.62
APTR-201ENST00000398043 FOXA3P55318 350 aaPredicted RBP11.15□□□□□ -0.62
APTR-201ENST00000398043 NTM-AS1Q6ZSK4 140 aa11.15□□□□□ -0.62
APTR-201ENST00000398043 RYR1P21817 5038 aa11.15□□□□□ -0.62
APTR-201ENST00000398043 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
APTR-201ENST00000398043 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
APTR-201ENST00000398043 TRGC1P0CF51 173 aa11.14□□□□□ -0.63
APTR-201ENST00000398043 SRSF3P84103 164 aaKnown RBP11.14□□□□□ -0.63
APTR-201ENST00000398043 CT83Q5H943 113 aa11.14□□□□□ -0.63
APTR-201ENST00000398043 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
APTR-201ENST00000398043 Q9HAA7 133 aa11.14□□□□□ -0.63
APTR-201ENST00000398043 DNAH5Q8TE73 4624 aa11.13□□□□□ -0.63
APTR-201ENST00000398043 A8MWL6 223 aa11.13□□□□□ -0.63
APTR-201ENST00000398043 MGPP08493 103 aa11.13□□□□□ -0.63
APTR-201ENST00000398043 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
APTR-201ENST00000398043 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
APTR-201ENST00000398043 PGPEP1Q9NXJ5 209 aa11.13□□□□□ -0.63
APTR-201ENST00000398043 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
APTR-201ENST00000398043 FUSP35637 526 aaKnown RBP eCLIP11.12□□□□□ -0.63
APTR-201ENST00000398043 TWIST1Q15672 202 aa11.12□□□□□ -0.63
APTR-201ENST00000398043 KRTAP17-1Q9BYP8 105 aa11.12□□□□□ -0.63
APTR-201ENST00000398043 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
APTR-201ENST00000398043 H7C1H1 209 aa11.11□□□□□ -0.63
APTR-201ENST00000398043 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
APTR-201ENST00000398043 RASL11AQ6T310 242 aa11.11□□□□□ -0.63
APTR-201ENST00000398043 TRAV8-3A0A0A6YYJ7 113 aa11.1□□□□□ -0.63
APTR-201ENST00000398043 EREGO14944 169 aa11.1□□□□□ -0.63
APTR-201ENST00000398043 FAM74A3Q4VXF1 159 aa11.1□□□□□ -0.63
APTR-201ENST00000398043 MAPKAPK5-AS1Q8N8E1 139 aa11.1□□□□□ -0.63
APTR-201ENST00000398043 GFRA4Q9GZZ7 299 aa11.1□□□□□ -0.63
APTR-201ENST00000398043 SMDT1Q9H4I9 107 aa11.1□□□□□ -0.63
APTR-201ENST00000398043 RPL23P62829 140 aaKnown RBP11.09□□□□□ -0.63
APTR-201ENST00000398043 TMEM241Q24JQ0 296 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 TMEM97Q5BJF2 176 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 ATRAIDQ6UW56 229 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 ISOC2Q96AB3 205 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 PGLYRP4Q96LB8 373 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 URGCP-MRPS24S4R325 110 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 V9GYV3 84 aa11.09□□□□□ -0.63
APTR-201ENST00000398043 HSPG2P98160 4391 aa11.08□□□□□ -0.64
APTR-201ENST00000398043 FAM231BA6NCW3 169 aa11.08□□□□□ -0.64
APTR-201ENST00000398043 PSCAO43653 123 aa11.08□□□□□ -0.64
APTR-201ENST00000398043 WFDC2Q14508 124 aa11.08□□□□□ -0.64
APTR-201ENST00000398043 PEA15Q15121 130 aa11.08□□□□□ -0.64
APTR-201ENST00000398043 IQCJQ1A5X6 159 aa11.08□□□□□ -0.64
APTR-201ENST00000398043 MPV17L2Q567V2 206 aa11.08□□□□□ -0.64
APTR-201ENST00000398043 A0A087WX48 190 aa11.07□□□□□ -0.64
APTR-201ENST00000398043 HIGD1CA8MV81 97 aa11.07□□□□□ -0.64
APTR-201ENST00000398043 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.07□□□□□ -0.64
APTR-201ENST00000398043 FRZBQ92765 325 aa11.07□□□□□ -0.64
APTR-201ENST00000398043 TM2D2Q9BX73 214 aa11.07□□□□□ -0.64
APTR-201ENST00000398043 APOBP04114 4563 aaKnown RBP11.06□□□□□ -0.64
APTR-201ENST00000398043 TRAV26-2A0A0B4J265 109 aa11.06□□□□□ -0.64
APTR-201ENST00000398043 ENHOQ6UWT2 76 aa11.06□□□□□ -0.64
APTR-201ENST00000398043 NAT8Q9UHE5 227 aa11.06□□□□□ -0.64
APTR-201ENST00000398043 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
APTR-201ENST00000398043 ELOBQ15370 118 aa11.05□□□□□ -0.64
APTR-201ENST00000398043 Q8N814 137 aa11.05□□□□□ -0.64
APTR-201ENST00000398043 CHCHD5Q9BSY4 110 aa11.05□□□□□ -0.64
APTR-201ENST00000398043 IGHV1-24A0A0C4DH33 117 aa11.04□□□□□ -0.64
APTR-201ENST00000398043 A0A1B0GUT8 65 aa11.04□□□□□ -0.64
APTR-201ENST00000398043 TMEM262E9PQX1 116 aa11.04□□□□□ -0.64
APTR-201ENST00000398043 C15orf54Q8N8G6 183 aa11.04□□□□□ -0.64
APTR-201ENST00000398043 Q8N976 141 aa11.04□□□□□ -0.64
APTR-201ENST00000398043 UBE2WQ96B02 151 aa11.04□□□□□ -0.64
APTR-201ENST00000398043 KRTAP10-1P60331 282 aa11.03□□□□□ -0.64
APTR-201ENST00000398043 PKIAP61925 76 aa11.03□□□□□ -0.64
APTR-201ENST00000398043 RBX1P62877 108 aa11.03□□□□□ -0.64
APTR-201ENST00000398043 NUP35Q8NFH5 326 aa11.03□□□□□ -0.64
APTR-201ENST00000398043 NTN5Q8WTR8 489 aaPredicted RBP11.03□□□□□ -0.64
APTR-201ENST00000398043 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
APTR-201ENST00000398043 PRR34Q9NV39 138 aa11.03□□□□□ -0.64
APTR-201ENST00000398043 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
APTR-201ENST00000398043 GAS8-AS1O95177 125 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 Q0VG73 95 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 ADIRFQ15847 76 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 KCNIP4Q6PIL6 250 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 SMIM15Q7Z3B0 74 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 RMI2Q96E14 147 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 RNF185Q96GF1 192 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 KRTAP4-5Q9BYR2 181 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 TMEM191AQ9H0A3 160 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 PCLOQ9Y6V0 5065 aa11.02□□□□□ -0.65
APTR-201ENST00000398043 SMIM27A0A1W2PRY6 76 aa11.01□□□□□ -0.65
APTR-201ENST00000398043 ANGP03950 147 aaKnown RBP11.01□□□□□ -0.65
APTR-201ENST00000398043 GAGE6Q13070 117 aa11.01□□□□□ -0.65
APTR-201ENST00000398043 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
APTR-201ENST00000398043 IGKV2D-24A0A075B6R9 120 aa11□□□□□ -0.65
APTR-201ENST00000398043 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms