RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 IGHV4-39P01824 125 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 ID1P41134 155 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 SS18L2Q9UHA2 77 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 ZNF580Q9UK33 172 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 IGLV4-3A0A075B6K6 122 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 TRBV30A0A0K0K1B3 111 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 CRLF1O75462 422 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 TRBV10-2A0A0K0K1G8 114 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 PF4V1P10720 104 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 DCANP1Q8TF63 244 aa12.85□□□□□ -0.35
EWSR1-206ENST00000397938 ZFHX3Q15911 3703 aa12.84□□□□□ -0.35
EWSR1-206ENST00000397938 TRIAP1O43715 76 aa12.84□□□□□ -0.35
EWSR1-206ENST00000397938 EDN2P20800 178 aa12.84□□□□□ -0.35
EWSR1-206ENST00000397938 NDUFV3P56181 108 aaKnown RBP12.84□□□□□ -0.35
EWSR1-206ENST00000397938 SPTBN1Q01082 2364 aaKnown RBP12.83□□□□□ -0.35
EWSR1-206ENST00000397938 PTPRQQ9UMZ3 2332 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 TEX49A0A1B0GTD5 131 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 I3L3M4 83 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 IGHG2P01859 326 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 Q6Q795 121 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 LITAFQ99732 161 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 TRAV8-4A0A0B4J246 113 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 ODF3Q96PU9 254 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 UBTD1Q9HAC8 227 aa12.83□□□□□ -0.36
EWSR1-206ENST00000397938 BEX4Q9NWD9 120 aaPredicted RBP12.83□□□□□ -0.36
EWSR1-206ENST00000397938 IGHV3-30-3P0DP02 117 aa12.82□□□□□ -0.36
EWSR1-206ENST00000397938 BRD3OSQ6XYD6 125 aa12.82□□□□□ -0.36
EWSR1-206ENST00000397938 ZFHX2Q9C0A1 2572 aaPredicted RBP12.82□□□□□ -0.36
EWSR1-206ENST00000397938 SPTA1P02549 2419 aa12.81□□□□□ -0.36
EWSR1-206ENST00000397938 B5MCH6 92 aa12.81□□□□□ -0.36
EWSR1-206ENST00000397938 H3BMM0 161 aa12.81□□□□□ -0.36
EWSR1-206ENST00000397938 UBE2WQ96B02 151 aa12.81□□□□□ -0.36
EWSR1-206ENST00000397938 LY6EQ16553 131 aa12.81□□□□□ -0.36
EWSR1-206ENST00000397938 TRAV12-2A0A075B6T6 113 aa12.8□□□□□ -0.36
EWSR1-206ENST00000397938 TIMM21Q9BVV7 248 aa12.8□□□□□ -0.36
EWSR1-206ENST00000397938 ADARB2-AS1A8MUL3 147 aa12.8□□□□□ -0.36
EWSR1-206ENST00000397938 K7EMT4 169 aa12.8□□□□□ -0.36
EWSR1-206ENST00000397938 IFITM1P13164 125 aa12.79□□□□□ -0.36
EWSR1-206ENST00000397938 SPXQ9BT56 116 aa12.79□□□□□ -0.36
EWSR1-206ENST00000397938 ICOSQ9Y6W8 199 aa12.79□□□□□ -0.36
EWSR1-206ENST00000397938 TTC32Q5I0X7 151 aa12.79□□□□□ -0.36
EWSR1-206ENST00000397938 IGHV1OR15-1A0A075B7D0 117 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 IGLV1-40P01703 118 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 MRPS36P82909 103 aaKnown RBP12.78□□□□□ -0.36
EWSR1-206ENST00000397938 FOXC1Q12948 553 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 C15orf53Q8NAA6 179 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 SPANXDQ9BXN6 97 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 SPANXCQ9NY87 97 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 FAM104AQ969W3 186 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 PYGO1Q9Y3Y4 419 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 NBASA2RRP1 2371 aa12.78□□□□□ -0.36
EWSR1-206ENST00000397938 IGKV3-20P01619 116 aa12.77□□□□□ -0.36
EWSR1-206ENST00000397938 CD28P10747 220 aa12.77□□□□□ -0.36
EWSR1-206ENST00000397938 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.36
EWSR1-206ENST00000397938 ABCA2Q9BZC7 2435 aa12.77□□□□□ -0.37
EWSR1-206ENST00000397938 TRAV8-3A0A0A6YYJ7 113 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 A6NDX4 124 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 H3BT86 120 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 H7C423 109 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 GAGE7O76087 117 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 PRSS2P07478 247 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 BLCAPP62952 87 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 GAGE4Q13068 117 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 ADAMTSL4-AS1Q5T5F5 129 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 H3BUX3 64 aa12.76□□□□□ -0.37
EWSR1-206ENST00000397938 PRRC2AP48634 2157 aaKnown RBP12.75□□□□□ -0.37
EWSR1-206ENST00000397938 IGHV1-58A0A0C4DH39 117 aa12.75□□□□□ -0.37
EWSR1-206ENST00000397938 CCDC179H3BU77 68 aa12.75□□□□□ -0.37
EWSR1-206ENST00000397938 MIAQ16674 131 aa12.75□□□□□ -0.37
EWSR1-206ENST00000397938 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
EWSR1-206ENST00000397938 SPINK13Q1W4C9 94 aa12.75□□□□□ -0.37
EWSR1-206ENST00000397938 CEP295Q9C0D2 2601 aa12.74□□□□□ -0.37
EWSR1-206ENST00000397938 CFHR3Q02985 330 aa12.74□□□□□ -0.37
EWSR1-206ENST00000397938 KLRB1Q12918 225 aa12.74□□□□□ -0.37
EWSR1-206ENST00000397938 COX6CP09669 75 aa12.74□□□□□ -0.37
EWSR1-206ENST00000397938 IGHV4-38-2P0DP08 117 aa12.74□□□□□ -0.37
EWSR1-206ENST00000397938 MRPL23Q16540 153 aaKnown RBP12.73□□□□□ -0.37
EWSR1-206ENST00000397938 EDA2RQ9HAV5 297 aa12.73□□□□□ -0.37
EWSR1-206ENST00000397938 SNRPD3P62318 126 aaKnown RBP12.73□□□□□ -0.37
EWSR1-206ENST00000397938 VSIG2Q96IQ7 327 aa12.72□□□□□ -0.37
EWSR1-206ENST00000397938 LST1O00453 97 aa12.72□□□□□ -0.37
EWSR1-206ENST00000397938 CEMP1Q6PRD7 247 aaPredicted RBP12.72□□□□□ -0.37
EWSR1-206ENST00000397938 Q6ZSV7 163 aa12.72□□□□□ -0.37
EWSR1-206ENST00000397938 CLEC2BQ92478 149 aa12.72□□□□□ -0.37
EWSR1-206ENST00000397938 TRGV11A0A075B6L2 103 aa12.71□□□□□ -0.37
EWSR1-206ENST00000397938 TMEM61Q8N0U2 210 aa12.71□□□□□ -0.37
EWSR1-206ENST00000397938 FAM240AA0A1B0GVK7 77 aa12.71□□□□□ -0.38
EWSR1-206ENST00000397938 K7EQG2 157 aa12.71□□□□□ -0.38
EWSR1-206ENST00000397938 RNASE13Q5GAN3 156 aaKnown RBP12.71□□□□□ -0.38
EWSR1-206ENST00000397938 TINCRA0A1B0GVN0 87 aa12.7□□□□□ -0.38
EWSR1-206ENST00000397938 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
EWSR1-206ENST00000397938 COL6A6A6NMZ7 2263 aa12.7□□□□□ -0.38
EWSR1-206ENST00000397938 NPC2P61916 151 aa12.7□□□□□ -0.38
EWSR1-206ENST00000397938 CELSR1Q9NYQ6 3014 aa12.69□□□□□ -0.38
EWSR1-206ENST00000397938 A8MZ25 164 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms