RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TPPP3Q9BW30 176 aa9.35□□□□□ -0.91
SEC13-204ENST00000397099 Q9HAA7 133 aa9.35□□□□□ -0.91
SEC13-204ENST00000397099 Q9UF83 564 aa9.35□□□□□ -0.91
SEC13-204ENST00000397099 APOBP04114 4563 aaKnown RBP9.35□□□□□ -0.91
SEC13-204ENST00000397099 TRBV20OR9-2A0A075B6H5 130 aa9.34□□□□□ -0.91
SEC13-204ENST00000397099 FUSP35637 526 aaKnown RBP eCLIP9.34□□□□□ -0.91
SEC13-204ENST00000397099 NEXN-AS1Q8NBZ9 246 aa9.34□□□□□ -0.91
SEC13-204ENST00000397099 KIF25-AS1Q9Y6Z4 181 aa9.34□□□□□ -0.91
SEC13-204ENST00000397099 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
SEC13-204ENST00000397099 Q0VG73 95 aa9.33□□□□□ -0.92
SEC13-204ENST00000397099 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
SEC13-204ENST00000397099 MUC21A0A0G2JKD1 596 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 MUC21A0A140T8X8 626 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 LRCOL1A6NCL2 159 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 GZMBP10144 247 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 CTRLP40313 264 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 Q8N1X5 172 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 NUDT10Q8NFP7 164 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 FRZBQ92765 325 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 NUDT11Q96G61 164 aa9.32□□□□□ -0.92
SEC13-204ENST00000397099 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
SEC13-204ENST00000397099 SSTP61278 116 aa9.31□□□□□ -0.92
SEC13-204ENST00000397099 LYZL1Q6UWQ5 148 aa9.31□□□□□ -0.92
SEC13-204ENST00000397099 SMIM15Q7Z3B0 74 aa9.31□□□□□ -0.92
SEC13-204ENST00000397099 OCC1Q8TAD7 63 aa9.31□□□□□ -0.92
SEC13-204ENST00000397099 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
SEC13-204ENST00000397099 DPH3P1Q9H4G8 78 aa9.31□□□□□ -0.92
SEC13-204ENST00000397099 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
SEC13-204ENST00000397099 M0QY20 66 aa9.3□□□□□ -0.92
SEC13-204ENST00000397099 NTF3P20783 257 aa9.3□□□□□ -0.92
SEC13-204ENST00000397099 GCSHP23434 173 aa9.3□□□□□ -0.92
SEC13-204ENST00000397099 FAM231DQ6ZW35 169 aa9.3□□□□□ -0.92
SEC13-204ENST00000397099 Q8N814 137 aa9.3□□□□□ -0.92
SEC13-204ENST00000397099 TRBV25-1A0A075B6N4 114 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 IGLV5-52A0A0A0MRZ9 124 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 A8MWL6 223 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 MGPP08493 103 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 CT83Q5H943 113 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 RASL11AQ6T310 242 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 TEX261Q6UWH6 196 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 FAM210AQ96ND0 272 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 KLK12Q9UKR0 248 aa9.29□□□□□ -0.92
SEC13-204ENST00000397099 K7EN84 100 aa9.28□□□□□ -0.92
SEC13-204ENST00000397099 CRPP02741 224 aa9.28□□□□□ -0.92
SEC13-204ENST00000397099 TWIST1Q15672 202 aa9.28□□□□□ -0.92
SEC13-204ENST00000397099 ATRAIDQ6UW56 229 aa9.28□□□□□ -0.92
SEC13-204ENST00000397099 CHCHD5Q9BSY4 110 aa9.28□□□□□ -0.92
SEC13-204ENST00000397099 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
SEC13-204ENST00000397099 NIT2Q9NQR4 276 aa9.28□□□□□ -0.92
SEC13-204ENST00000397099 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
SEC13-204ENST00000397099 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 GATCO43716 136 aaKnown RBP9.27□□□□□ -0.93
SEC13-204ENST00000397099 IQCJQ1A5X6 159 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 SUMO4Q6EEV6 95 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 Q8N3U1 123 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 Q8N976 141 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 UBE2WQ96B02 151 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 BORCS7Q96B45 105 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 PGLYRP4Q96LB8 373 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 SMIM7Q9BQ49 75 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 TMEM70Q9BUB7 260 aa9.27□□□□□ -0.93
SEC13-204ENST00000397099 IGKV2D-24A0A075B6R9 120 aa9.26□□□□□ -0.93
SEC13-204ENST00000397099 FAM231BA6NCW3 169 aa9.26□□□□□ -0.93
SEC13-204ENST00000397099 NKX2-5P52952 324 aaPredicted RBP9.26□□□□□ -0.93
SEC13-204ENST00000397099 CEBPGP53567 150 aa9.26□□□□□ -0.93
SEC13-204ENST00000397099 FOXA3P55318 350 aaPredicted RBP9.26□□□□□ -0.93
SEC13-204ENST00000397099 FAM74A3Q4VXF1 159 aa9.26□□□□□ -0.93
SEC13-204ENST00000397099 GFRA4Q9GZZ7 299 aa9.26□□□□□ -0.93
SEC13-204ENST00000397099 SMDT1Q9H4I9 107 aa9.26□□□□□ -0.93
SEC13-204ENST00000397099 ZNF727A8MUV8 499 aa9.25□□□□□ -0.93
SEC13-204ENST00000397099 MIAQ16674 131 aa9.25□□□□□ -0.93
SEC13-204ENST00000397099 C14orf177Q52M58 125 aa9.25□□□□□ -0.93
SEC13-204ENST00000397099 C1orf43Q9BWL3 253 aa9.25□□□□□ -0.93
SEC13-204ENST00000397099 A0A1B0GVG6 124 aa9.24□□□□□ -0.93
SEC13-204ENST00000397099 EPM2AB3EWF7 344 aa9.24□□□□□ -0.93
SEC13-204ENST00000397099 ANGP03950 147 aaKnown RBP9.24□□□□□ -0.93
SEC13-204ENST00000397099 KRTAP10-1P60331 282 aa9.24□□□□□ -0.93
SEC13-204ENST00000397099 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
SEC13-204ENST00000397099 C15orf54Q8N8G6 183 aa9.24□□□□□ -0.93
SEC13-204ENST00000397099 A0A1B0GUV1 79 aa9.23□□□□□ -0.93
SEC13-204ENST00000397099 SRP19P09132 144 aaKnown RBP9.23□□□□□ -0.93
SEC13-204ENST00000397099 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
SEC13-204ENST00000397099 LINC01551Q86U37 167 aa9.23□□□□□ -0.93
SEC13-204ENST00000397099 GTSF1Q8WW33 167 aa9.23□□□□□ -0.93
SEC13-204ENST00000397099 OSTCQ9NRP0 149 aa9.23□□□□□ -0.93
SEC13-204ENST00000397099 COTL1Q14019 142 aa9.22□□□□□ -0.93
SEC13-204ENST00000397099 TSKUQ8WUA8 353 aa9.22□□□□□ -0.93
SEC13-204ENST00000397099 TMEM243Q9BU79 118 aa9.22□□□□□ -0.93
SEC13-204ENST00000397099 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
SEC13-204ENST00000397099 A0A1B0GUT8 65 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 UBE2L6O14933 153 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 NCR2O95944 276 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 XGP55808 180 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 RBX1P62877 108 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 PEA15Q15121 130 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 TMEM241Q24JQ0 296 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 ENHOQ6UWT2 76 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 BAALCQ8WXS3 180 aa9.21□□□□□ -0.94
SEC13-204ENST00000397099 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
SEC13-204ENST00000397099 GAGE6Q13070 117 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms