RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 DNAJC30Q96LL9 226 aa11.35□□□□□ -0.59
AP1S3-202ENST00000396653 DNAH1Q9P2D7 4330 aa11.35□□□□□ -0.59
AP1S3-202ENST00000396653 LY6G6CO95867 125 aa11.34□□□□□ -0.59
AP1S3-202ENST00000396653 S100PP25815 95 aa11.34□□□□□ -0.59
AP1S3-202ENST00000396653 ESRGQ1W209 222 aa11.34□□□□□ -0.59
AP1S3-202ENST00000396653 RASL11AQ6T310 242 aa11.34□□□□□ -0.59
AP1S3-202ENST00000396653 ATP6V0E2Q8NHE4 81 aa11.34□□□□□ -0.59
AP1S3-202ENST00000396653 UPK3BQ9BT76 320 aa11.34□□□□□ -0.59
AP1S3-202ENST00000396653 Q9UF83 564 aa11.34□□□□□ -0.59
AP1S3-202ENST00000396653 MRPS16Q9Y3D3 137 aaKnown RBP11.34□□□□□ -0.59
AP1S3-202ENST00000396653 LINC00588Q9Y4M8 146 aa11.34□□□□□ -0.59
AP1S3-202ENST00000396653 CAMPP49913 170 aa11.33□□□□□ -0.6
AP1S3-202ENST00000396653 UBE2D3P61077 147 aa11.33□□□□□ -0.6
AP1S3-202ENST00000396653 UBE2D2P62837 147 aa11.33□□□□□ -0.6
AP1S3-202ENST00000396653 LYPD5Q6UWN5 251 aa11.33□□□□□ -0.6
AP1S3-202ENST00000396653 ZNRF2Q8NHG8 242 aa11.33□□□□□ -0.6
AP1S3-202ENST00000396653 RNF185Q96GF1 192 aa11.33□□□□□ -0.6
AP1S3-202ENST00000396653 RAB4AP20338 218 aa11.32□□□□□ -0.6
AP1S3-202ENST00000396653 FAM104BQ5XKR9 115 aa11.32□□□□□ -0.6
AP1S3-202ENST00000396653 AMN1Q8IY45 258 aa11.32□□□□□ -0.6
AP1S3-202ENST00000396653 MRAP2Q96G30 205 aa11.32□□□□□ -0.6
AP1S3-202ENST00000396653 GTSF1LQ9H1H1 148 aa11.32□□□□□ -0.6
AP1S3-202ENST00000396653 NIT2Q9NQR4 276 aa11.32□□□□□ -0.6
AP1S3-202ENST00000396653 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
AP1S3-202ENST00000396653 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.3□□□□□ -0.6
AP1S3-202ENST00000396653 TNFRSF18Q9Y5U5 241 aa11.3□□□□□ -0.6
AP1S3-202ENST00000396653 SACSQ9NZJ4 4579 aa11.29□□□□□ -0.6
AP1S3-202ENST00000396653 DNAH6Q9C0G6 4158 aa11.29□□□□□ -0.6
AP1S3-202ENST00000396653 TRAV26-2A0A0B4J265 109 aa11.29□□□□□ -0.6
AP1S3-202ENST00000396653 LELP1Q5T871 98 aa11.29□□□□□ -0.6
AP1S3-202ENST00000396653 DAZ4Q86SG3 579 aaKnown RBP11.29□□□□□ -0.6
AP1S3-202ENST00000396653 DAZ3Q9NR90 486 aaKnown RBP11.29□□□□□ -0.6
AP1S3-202ENST00000396653 TRBV6-5A0A0K0K1A5 114 aa11.28□□□□□ -0.6
AP1S3-202ENST00000396653 PPP1R17O96001 155 aa11.28□□□□□ -0.6
AP1S3-202ENST00000396653 MRPL51Q4U2R6 128 aaKnown RBP11.28□□□□□ -0.6
AP1S3-202ENST00000396653 TMEM97Q5BJF2 176 aa11.28□□□□□ -0.6
AP1S3-202ENST00000396653 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
AP1S3-202ENST00000396653 COX19Q49B96 90 aa11.27□□□□□ -0.61
AP1S3-202ENST00000396653 OR10J3Q5JRS4 329 aa11.27□□□□□ -0.61
AP1S3-202ENST00000396653 PPBPP02775 128 aa11.26□□□□□ -0.61
AP1S3-202ENST00000396653 RPL39LQ96EH5 51 aaKnown RBP11.26□□□□□ -0.61
AP1S3-202ENST00000396653 KMT2CQ8NEZ4 4911 aaKnown RBP11.26□□□□□ -0.61
AP1S3-202ENST00000396653 TRAV8-6A0A0B4J262 113 aa11.25□□□□□ -0.61
AP1S3-202ENST00000396653 ATRAIDQ6UW56 229 aa11.25□□□□□ -0.61
AP1S3-202ENST00000396653 SIVA1O15304 175 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 GAS8-AS1O95177 125 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 NCR2O95944 276 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 HLA-DQA1P01909 254 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 CKS2P33552 79 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 ELOBQ15370 118 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 TMEM136Q6ZRR5 245 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 NRACQ8N912 160 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 Q9H8V8 135 aa11.24□□□□□ -0.61
AP1S3-202ENST00000396653 TRBV24-1A0A075B6N3 115 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 TRBV6-8A0A0A6YYG3 113 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 IGHV3-38A0A0C4DH36 116 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 SMKR1H3BMG3 65 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 PHOX2AO14813 284 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
AP1S3-202ENST00000396653 WFDC10BQ8IUB3 73 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 ST20Q9HBF5 79 aa11.23□□□□□ -0.61
AP1S3-202ENST00000396653 D6R8Y8 96 aa11.22□□□□□ -0.61
AP1S3-202ENST00000396653 MT-ND6P03923 174 aa11.22□□□□□ -0.61
AP1S3-202ENST00000396653 DNAH10OSP0CZ25 163 aa11.22□□□□□ -0.61
AP1S3-202ENST00000396653 ORMDL3Q8N138 153 aa11.22□□□□□ -0.61
AP1S3-202ENST00000396653 TMEM70Q9BUB7 260 aa11.22□□□□□ -0.61
AP1S3-202ENST00000396653 SMCO4Q9NRQ5 59 aa11.22□□□□□ -0.61
AP1S3-202ENST00000396653 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
AP1S3-202ENST00000396653 KMT2AQ03164 3969 aa11.22□□□□□ -0.61
AP1S3-202ENST00000396653 K7EP13 123 aa11.21□□□□□ -0.61
AP1S3-202ENST00000396653 POLR2KP53803 58 aaKnown RBP11.21□□□□□ -0.61
AP1S3-202ENST00000396653 SUMO2P61956 95 aaKnown RBP11.21□□□□□ -0.61
AP1S3-202ENST00000396653 RPL32P62910 135 aaKnown RBP11.21□□□□□ -0.61
AP1S3-202ENST00000396653 TTC32Q5I0X7 151 aa11.21□□□□□ -0.61
AP1S3-202ENST00000396653 YPEL4Q96NS1 127 aa11.21□□□□□ -0.61
AP1S3-202ENST00000396653 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
AP1S3-202ENST00000396653 TRBV25-1A0A075B6N4 114 aa11.2□□□□□ -0.62
AP1S3-202ENST00000396653 TGIF2-C20orf24A0A0A6YYL0 155 aa11.2□□□□□ -0.62
AP1S3-202ENST00000396653 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
AP1S3-202ENST00000396653 NBDYA0A0U1RRE5 68 aa11.2□□□□□ -0.62
AP1S3-202ENST00000396653 COTL1Q14019 142 aa11.2□□□□□ -0.62
AP1S3-202ENST00000396653 IQCJQ1A5X6 159 aa11.2□□□□□ -0.62
AP1S3-202ENST00000396653 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
AP1S3-202ENST00000396653 NTM-AS1Q6ZSK4 140 aa11.2□□□□□ -0.62
AP1S3-202ENST00000396653 IGLV2-18A0A075B6J9 118 aa11.19□□□□□ -0.62
AP1S3-202ENST00000396653 IGHV1-24A0A0C4DH33 117 aa11.19□□□□□ -0.62
AP1S3-202ENST00000396653 I3L3M4 83 aa11.19□□□□□ -0.62
AP1S3-202ENST00000396653 TNFRSF6BO95407 300 aa11.19□□□□□ -0.62
AP1S3-202ENST00000396653 PKIAP61925 76 aa11.19□□□□□ -0.62
AP1S3-202ENST00000396653 Q6ZR54 194 aa11.19□□□□□ -0.62
AP1S3-202ENST00000396653 PRELID3AQ96N28 172 aa11.19□□□□□ -0.62
AP1S3-202ENST00000396653 CHCHD7Q9BUK0 85 aa11.19□□□□□ -0.62
AP1S3-202ENST00000396653 NPYP01303 97 aa11.18□□□□□ -0.62
AP1S3-202ENST00000396653 NIT1Q86X76 327 aa11.18□□□□□ -0.62
AP1S3-202ENST00000396653 RYR2Q92736 4967 aa11.18□□□□□ -0.62
AP1S3-202ENST00000396653 VCYO14598 125 aa11.17□□□□□ -0.62
AP1S3-202ENST00000396653 APCSP02743 223 aa11.17□□□□□ -0.62
AP1S3-202ENST00000396653 BTF3P20290 206 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms