RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 GAGE2EQ4V326 116 aa6.43□□□□□ -1.38
BDNF-204ENST00000395980 NTN5Q8WTR8 489 aaPredicted RBP6.43□□□□□ -1.38
BDNF-204ENST00000395980 GAGE2DQ9UEU5 116 aa6.43□□□□□ -1.38
BDNF-204ENST00000395980 A0A0J9YXV3 536 aa6.43□□□□□ -1.38
BDNF-204ENST00000395980 MRPS36P82909 103 aaKnown RBP6.43□□□□□ -1.38
BDNF-204ENST00000395980 MRPL23Q16540 153 aaKnown RBP6.43□□□□□ -1.38
BDNF-204ENST00000395980 LITAFQ99732 161 aa6.43□□□□□ -1.38
BDNF-204ENST00000395980 OPRPNQ99935 248 aaPredicted RBP6.43□□□□□ -1.38
BDNF-204ENST00000395980 MED13LQ71F56 2210 aa6.43□□□□□ -1.38
BDNF-204ENST00000395980 H3BT86 120 aa6.43□□□□□ -1.38
BDNF-204ENST00000395980 TRGV11A0A075B6L2 103 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 IGHV3-30-3P0DP02 117 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 TIMM21Q9BVV7 248 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 DEFB104AQ8WTQ1 72 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 SPANXA1Q9NS26 97 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 TACC2O95359 2948 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 RIF1Q5UIP0 2472 aaKnown RBP6.42□□□□□ -1.38
BDNF-204ENST00000395980 IGHV3OR16-10A0A075B7F0 116 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 TRAV8-4A0A0B4J246 113 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 H3BMM0 161 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 TRIAP1O43715 76 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 SNRPD3P62318 126 aaKnown RBP6.42□□□□□ -1.38
BDNF-204ENST00000395980 UBE2WQ96B02 151 aa6.42□□□□□ -1.38
BDNF-204ENST00000395980 BRD3OSQ6XYD6 125 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 IGHV1-58A0A0C4DH39 117 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 H7C2G1 150 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 COX6CP09669 75 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 PTPRZ1P23471 2315 aaPredicted RBP6.41□□□□□ -1.38
BDNF-204ENST00000395980 H3BUX3 64 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 K7EQG2 157 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 NHLRC4P0CG21 123 aaPredicted RBP6.41□□□□□ -1.38
BDNF-204ENST00000395980 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
BDNF-204ENST00000395980 LY6EQ16553 131 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 ICOSQ9Y6W8 199 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 FAM240AA0A1B0GVK7 77 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 TIMM17BO60830 172 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 ELANEP08246 267 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 CD28P10747 220 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 MIAQ16674 131 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 YAE1D1Q9NRH1 226 aa6.41□□□□□ -1.38
BDNF-204ENST00000395980 IGHV3-64A0A075B6Q5 118 aa6.4□□□□□ -1.38
BDNF-204ENST00000395980 TMEM89A2RUT3 159 aa6.4□□□□□ -1.38
BDNF-204ENST00000395980 DMXL1Q9Y485 3027 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 TINCRA0A1B0GVN0 87 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 IGHV4-39P01824 125 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 GATA3P23771 443 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 IFITM1P13164 125 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 DEFB121Q5J5C9 76 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 PIK3CD-AS1Q5SR53 167 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 C2orf82Q6UX34 121 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 NDUFA12Q9UI09 145 aa6.4□□□□□ -1.39
BDNF-204ENST00000395980 TRAV4A0A0B4J268 109 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 BLCAPP62952 87 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 FAM104AQ969W3 186 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 PIMREGQ9BSJ6 248 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 HRNRQ86YZ3 2850 aaPredicted RBP6.39□□□□□ -1.39
BDNF-204ENST00000395980 TRAV12-2A0A075B6T6 113 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 IGHV4-38-2P0DP08 117 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 TTC32Q5I0X7 151 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 VSIG2Q96IQ7 327 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 SPXQ9BT56 116 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 SPTA1P02549 2419 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 DCHS2Q6V1P9 2916 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 TEX49A0A1B0GTD5 131 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 EDN2P20800 178 aa6.39□□□□□ -1.39
BDNF-204ENST00000395980 H7C423 109 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 PSMB8P28062 276 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 DCHS1Q96JQ0 3298 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 GAGE12JA6NER3 117 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 LST1O00453 97 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 GAGE7O76087 117 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 GAGE12FP0CL80 117 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 GAGE12GP0CL81 117 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 GAGE12IP0CL82 117 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 GAGE4Q13068 117 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 SPINK13Q1W4C9 94 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 TMEM61Q8N0U2 210 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 C15orf53Q8NAA6 179 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 ATMQ13315 3056 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 CRLF1O75462 422 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 BEX4Q9NWD9 120 aaPredicted RBP6.38□□□□□ -1.39
BDNF-204ENST00000395980 ABCA2Q9BZC7 2435 aa6.38□□□□□ -1.39
BDNF-204ENST00000395980 PRSS2P07478 247 aa6.37□□□□□ -1.39
BDNF-204ENST00000395980 SPTBN1Q01082 2364 aaKnown RBP6.37□□□□□ -1.39
BDNF-204ENST00000395980 IGHV4-61A0A0C4DH41 118 aa6.37□□□□□ -1.39
BDNF-204ENST00000395980 ADAMTSL4-AS1Q5T5F5 129 aa6.37□□□□□ -1.39
BDNF-204ENST00000395980 TRAV8-3A0A0A6YYJ7 113 aa6.37□□□□□ -1.39
BDNF-204ENST00000395980 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 PRRC2AP48634 2157 aaKnown RBP6.36□□□□□ -1.39
BDNF-204ENST00000395980 A8MTW9 85 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 ADARB2-AS1A8MUL3 147 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 IGKV3-20P01619 116 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 C10orf105Q8TEF2 133 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 LRBAP50851 2863 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 B5MCH6 92 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
BDNF-204ENST00000395980 IGLV5-45A0A087WSX0 123 aa6.35□□□□□ -1.39
BDNF-204ENST00000395980 CHCHD7Q9BUK0 85 aa6.35□□□□□ -1.39
BDNF-204ENST00000395980 NDUFA1O15239 70 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms