RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TMEM78Q5T7P6 136 aa8.79□□□□□ -1
VCPKMT-201ENST00000395859 Q6ZQT7 251 aa8.79□□□□□ -1
VCPKMT-201ENST00000395859 RASL10AQ92737 203 aa8.79□□□□□ -1
VCPKMT-201ENST00000395859 NDFIP1Q9BT67 221 aa8.79□□□□□ -1
VCPKMT-201ENST00000395859 TRAV8-6A0A0B4J262 113 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 TYMSP04818 313 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 PFN1P07737 140 aaKnown RBP8.78□□□□□ -1
VCPKMT-201ENST00000395859 CRISP2P16562 243 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 RAB5AP20339 215 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 ERCC8Q13216 396 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 RASL11AQ6T310 242 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 Q86TA4 180 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 EXOC3-AS1Q8N2X6 119 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 AGPAT4-IT1Q9H0P7 198 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 IL36BQ9NZH7 164 aa8.78□□□□□ -1
VCPKMT-201ENST00000395859 TRAV8-3A0A0A6YYJ7 113 aa8.77□□□□□ -1.01
VCPKMT-201ENST00000395859 K7EN84 100 aa8.77□□□□□ -1.01
VCPKMT-201ENST00000395859 GPX1P07203 203 aa8.77□□□□□ -1.01
VCPKMT-201ENST00000395859 Q6AWC8 147 aa8.77□□□□□ -1.01
VCPKMT-201ENST00000395859 GOLT1AQ6ZVE7 132 aa8.77□□□□□ -1.01
VCPKMT-201ENST00000395859 PSG8Q9UQ74 426 aa8.77□□□□□ -1.01
VCPKMT-201ENST00000395859 IGHV1OR15-1A0A075B7D0 117 aa8.76□□□□□ -1.01
VCPKMT-201ENST00000395859 XKRY2A2RUG3 117 aa8.76□□□□□ -1.01
VCPKMT-201ENST00000395859 A8MWL6 223 aa8.76□□□□□ -1.01
VCPKMT-201ENST00000395859 RNASE4P34096 147 aaKnown RBP8.76□□□□□ -1.01
VCPKMT-201ENST00000395859 KRTAP10-8P60410 259 aa8.76□□□□□ -1.01
VCPKMT-201ENST00000395859 OR10J3Q5JRS4 329 aa8.76□□□□□ -1.01
VCPKMT-201ENST00000395859 PRR9Q5T870 116 aa8.76□□□□□ -1.01
VCPKMT-201ENST00000395859 C1orf196B1AJZ1 125 aa8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 PANO1I0J062 215 aa8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 GATCO43716 136 aaKnown RBP8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 MGST1P10620 155 aaKnown RBP8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 RAB5BP61020 215 aa8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 GNG5P63218 68 aa8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 ZFAND2AQ8N6M9 145 aa8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 COX11Q9Y6N1 276 aa8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 V9GYV3 84 aa8.75□□□□□ -1.01
VCPKMT-201ENST00000395859 TRAV4A0A0B4J268 109 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 C19orf71A6NCJ1 209 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 P01737 135 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 MT-ND6P03923 174 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 ZNF138P52744 262 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 FOXA3P55318 350 aaPredicted RBP8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 RPS20P60866 119 aaKnown RBP8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 ATP5L2Q7Z4Y8 100 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 ATP6V0E2Q8NHE4 81 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 TSKUQ8WUA8 353 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 RPH3ALQ9UNE2 315 aa8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.74□□□□□ -1.01
VCPKMT-201ENST00000395859 IGKV2-40A0A087WW87 121 aaPredicted RBP8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 TRAV34A0A0B4J273 112 aa8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 A0A1B0GW15 77 aa8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 PGPEP1LA6NFU8 196 aa8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 IGKV2D-40P01614 121 aaPredicted RBP8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 GATA1P15976 413 aaPredicted RBP8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 SMUG1Q53HV7 270 aa8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 WDR73Q6P4I2 378 aa8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 PRNTQ86SH4 94 aa8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 NHLRC2Q8NBF2 726 aa8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 RPP21Q9H633 154 aaKnown RBP8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 NAT8BQ9UHF3 227 aa8.73□□□□□ -1.01
VCPKMT-201ENST00000395859 A0A0J9YXV3 536 aa8.72□□□□□ -1.01
VCPKMT-201ENST00000395859 CXCL1P09341 107 aa8.72□□□□□ -1.01
VCPKMT-201ENST00000395859 FAM162BQ5T6X4 162 aa8.72□□□□□ -1.01
VCPKMT-201ENST00000395859 DAZ4Q86SG3 579 aaKnown RBP8.72□□□□□ -1.01
VCPKMT-201ENST00000395859 NUDT10Q8NFP7 164 aa8.72□□□□□ -1.01
VCPKMT-201ENST00000395859 NUDT11Q96G61 164 aa8.72□□□□□ -1.01
VCPKMT-201ENST00000395859 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
VCPKMT-201ENST00000395859 DAZ3Q9NR90 486 aaKnown RBP8.72□□□□□ -1.01
VCPKMT-201ENST00000395859 FABP5P3A8MUU1 101 aa8.71□□□□□ -1.02
VCPKMT-201ENST00000395859 S100A8P05109 93 aa8.71□□□□□ -1.02
VCPKMT-201ENST00000395859 URGCP-MRPS24S4R325 110 aa8.71□□□□□ -1.02
VCPKMT-201ENST00000395859 RPS10P46783 165 aaKnown RBP8.7□□□□□ -1.02
VCPKMT-201ENST00000395859 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
VCPKMT-201ENST00000395859 SPXQ9BT56 116 aa8.7□□□□□ -1.02
VCPKMT-201ENST00000395859 GNB1LQ9BYB4 327 aa8.7□□□□□ -1.02
VCPKMT-201ENST00000395859 RNASE7Q9H1E1 156 aaKnown RBP8.7□□□□□ -1.02
VCPKMT-201ENST00000395859 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
VCPKMT-201ENST00000395859 TRAV8-1A0A0A6YYK1 113 aa8.69□□□□□ -1.02
VCPKMT-201ENST00000395859 TGIF2-C20orf24A0A0A6YYL0 155 aa8.69□□□□□ -1.02
VCPKMT-201ENST00000395859 SLC25A29Q8N8R3 303 aa8.69□□□□□ -1.02
VCPKMT-201ENST00000395859 ZC2HC1AQ96GY0 325 aa8.69□□□□□ -1.02
VCPKMT-201ENST00000395859 FSIP2Q5CZC0 6907 aa8.68□□□□□ -1.02
VCPKMT-201ENST00000395859 TRGV11A0A075B6L2 103 aa8.68□□□□□ -1.02
VCPKMT-201ENST00000395859 HLA-DQA1P01909 254 aa8.68□□□□□ -1.02
VCPKMT-201ENST00000395859 PRR27Q6MZM9 219 aa8.68□□□□□ -1.02
VCPKMT-201ENST00000395859 FAM159AQ6UWV7 190 aa8.68□□□□□ -1.02
VCPKMT-201ENST00000395859 OR4C5Q8NGB2 326 aa8.68□□□□□ -1.02
VCPKMT-201ENST00000395859 Q8TAT8 98 aa8.68□□□□□ -1.02
VCPKMT-201ENST00000395859 IGHV3-16A0A0C4DH30 117 aa8.67□□□□□ -1.02
VCPKMT-201ENST00000395859 F2Z2F3 143 aa8.67□□□□□ -1.02
VCPKMT-201ENST00000395859 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
VCPKMT-201ENST00000395859 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
VCPKMT-201ENST00000395859 BORCS7Q96B45 105 aa8.67□□□□□ -1.02
VCPKMT-201ENST00000395859 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
VCPKMT-201ENST00000395859 S100A6P06703 90 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms