RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ANKARQ7Z5J8 1434 aa2.42□□□□□ -2.02
HMGB1P10-201ENST00000395823 ANKRD17O75179 2603 aaKnown RBP2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 MAST2Q6P0Q8 1798 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 CITO14578 2027 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 TRAV3A0A0B4J244 114 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 TRAV1-1A0A0B4J248 108 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 A0A1W2PPM0 123 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 hADV29S1A0JD25 119 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 SDHAF1A6NFY7 115 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 CTSGP08311 255 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 IGLC2P0DOY2 106 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 IGLC3P0DOY3 106 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 MIFP14174 115 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 HINT1P49773 126 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 SMIM11AP58511 58 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 RHOHQ15669 191 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 HCP5Q6MZN7 132 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 CYP4F30PQ9H0H9 118 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 LRRC37A3O60309 1634 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 EML6Q6ZMW3 1958 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 DSCAMO60469 2012 aa2.41□□□□□ -2.02
HMGB1P10-201ENST00000395823 NUP98P52948 1817 aa2.4□□□□□ -2.02
HMGB1P10-201ENST00000395823 NCOA2Q15596 1464 aa2.4□□□□□ -2.02
HMGB1P10-201ENST00000395823 GCN1Q92616 2671 aaKnown RBP2.4□□□□□ -2.02
HMGB1P10-201ENST00000395823 MYH9P35579 1960 aaKnown RBP2.4□□□□□ -2.02
HMGB1P10-201ENST00000395823 PTPN13Q12923 2485 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 TCRBV4S1A1TA0A5B7 111 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 ERC2-IT1O76042 136 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 CFDP00746 253 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 DEFA4P12838 97 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 UBE2G1P62253 170 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 S100A7L2Q5SY68 101 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 SLC48A1Q6P1K1 146 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 BRD3OSQ6XYD6 125 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 FAM19A2Q8N3H0 131 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 MINOS1-NBL1R4GNA1 71 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 RGPD3A6NKT7 1758 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 RGPD4Q7Z3J3 1758 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 N4BP2Q86UW6 1770 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 DOPEY1Q5JWR5 2465 aa2.4□□□□□ -2.03
HMGB1P10-201ENST00000395823 PKD1L3Q7Z443 1732 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 PXDNQ92626 1479 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 FAM208BQ5VWN6 2430 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 LCTP09848 1927 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 CEP290O15078 2479 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 CRYM-AS1A6NIL9 109 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 C5orf67F2Z3F1 127 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 CCL16O15467 120 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 PMCHL1Q16048 86 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 C9orf116Q5BN46 136 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 HEPN1Q6WQI6 88 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 IQGAP2Q13576 1575 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 PLXNB1O43157 2135 aa2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 TRPM3Q9HCF6 1732 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P10-201ENST00000395823 USP34Q70CQ2 3546 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 IGKV1D-42A0A075B6H8 117 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 IGKV3D-11A0A0A0MRZ8 115 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 TRAV10A0A0B4J240 114 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 TRAV17A0A0B4J275 112 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 TRBV10-3A0A0K0K1G6 114 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 IGKV4-1P06312 121 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 ACYP1P07311 99 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 GNGT1P63211 74 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 ETDBQ3ZM63 59 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 BVES-AS1Q5T3Y7 98 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 NDUFA11Q86Y39 141 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 NXT2Q9NPJ8 142 aaKnown RBP2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 NDUFB11Q9NX14 153 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 NRXN3Q9Y4C0 1643 aa2.38□□□□□ -2.03
HMGB1P10-201ENST00000395823 PLCH1Q4KWH8 1693 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 NWD2Q9ULI1 1742 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 HFM1A2PYH4 1435 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 REV3LO60673 3130 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 TRAV13-2A0A0B4J235 113 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 A0A0J9YX75 114 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 SYS1-DBNDD2H3BUS1 97 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 NUPR1O60356 82 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 BCE1O60756 84 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 ASAH2BP0C7U1 165 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 CXCL8P10145 99 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 SNRPFP62306 86 aaKnown RBP2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 ERHP84090 104 aaKnown RBP2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 FBN3Q75N90 2809 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 DNAH12Q6ZR08 3092 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 TPRP12270 2363 aaKnown RBP2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 ARAP2Q8WZ64 1704 aa2.37□□□□□ -2.03
HMGB1P10-201ENST00000395823 MYH6P13533 1939 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 ALPK3Q96L96 1907 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 ABCA12Q86UK0 2595 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 SPTBN4Q9H254 2564 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 PSME4Q14997 1843 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 B4DSR2 109 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 MIR22HGQ0VDD5 57 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 SPATA45Q537H7 98 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 NMSQ5H8A3 153 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 SPTSSBQ8NFR3 76 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 C4orf3Q8WVX3 66 aa2.36□□□□□ -2.03
HMGB1P10-201ENST00000395823 TIMM21Q9BVV7 248 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms