RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.35□□□□□ -0.91
HLA-DMA-203ENST00000395305 URGCP-MRPS24S4R325 110 aa9.35□□□□□ -0.91
HLA-DMA-203ENST00000395305 TRBV6-8A0A0A6YYG3 113 aa9.34□□□□□ -0.91
HLA-DMA-203ENST00000395305 NTF3P20783 257 aa9.34□□□□□ -0.91
HLA-DMA-203ENST00000395305 CHCHD7Q9BUK0 85 aa9.34□□□□□ -0.91
HLA-DMA-203ENST00000395305 EIF5A2Q9GZV4 153 aaKnown RBP9.34□□□□□ -0.91
HLA-DMA-203ENST00000395305 RNASE7Q9H1E1 156 aaKnown RBP9.34□□□□□ -0.91
HLA-DMA-203ENST00000395305 RPP21Q9H633 154 aaKnown RBP9.34□□□□□ -0.91
HLA-DMA-203ENST00000395305 A0A087WX48 190 aa9.33□□□□□ -0.92
HLA-DMA-203ENST00000395305 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
HLA-DMA-203ENST00000395305 ELOBQ15370 118 aa9.33□□□□□ -0.92
HLA-DMA-203ENST00000395305 TMEM97Q5BJF2 176 aa9.33□□□□□ -0.92
HLA-DMA-203ENST00000395305 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
HLA-DMA-203ENST00000395305 H7C1H1 209 aa9.32□□□□□ -0.92
HLA-DMA-203ENST00000395305 M0QY20 66 aa9.32□□□□□ -0.92
HLA-DMA-203ENST00000395305 CTRLP40313 264 aa9.32□□□□□ -0.92
HLA-DMA-203ENST00000395305 KCNIP4Q6PIL6 250 aa9.32□□□□□ -0.92
HLA-DMA-203ENST00000395305 FAM210AQ96ND0 272 aa9.32□□□□□ -0.92
HLA-DMA-203ENST00000395305 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
HLA-DMA-203ENST00000395305 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
HLA-DMA-203ENST00000395305 DNAH5Q8TE73 4624 aa9.32□□□□□ -0.92
HLA-DMA-203ENST00000395305 HSPG2P98160 4391 aa9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 TMEM262E9PQX1 116 aa9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 MGPP08493 103 aa9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 CEBPGP53567 150 aa9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 SUMO4Q6EEV6 95 aa9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 DPH3P1Q9H4G8 78 aa9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 KLK12Q9UKR0 248 aa9.31□□□□□ -0.92
HLA-DMA-203ENST00000395305 A8MWL6 223 aa9.3□□□□□ -0.92
HLA-DMA-203ENST00000395305 GATCO43716 136 aaKnown RBP9.3□□□□□ -0.92
HLA-DMA-203ENST00000395305 PKIAP61925 76 aa9.3□□□□□ -0.92
HLA-DMA-203ENST00000395305 TWIST1Q15672 202 aa9.3□□□□□ -0.92
HLA-DMA-203ENST00000395305 NTM-AS1Q6ZSK4 140 aa9.3□□□□□ -0.92
HLA-DMA-203ENST00000395305 NTN5Q8WTR8 489 aaPredicted RBP9.3□□□□□ -0.92
HLA-DMA-203ENST00000395305 RMI2Q96E14 147 aa9.3□□□□□ -0.92
HLA-DMA-203ENST00000395305 SRP19P09132 144 aaKnown RBP9.29□□□□□ -0.92
HLA-DMA-203ENST00000395305 GCSHP23434 173 aa9.29□□□□□ -0.92
HLA-DMA-203ENST00000395305 RASL11AQ6T310 242 aa9.29□□□□□ -0.92
HLA-DMA-203ENST00000395305 Q8N814 137 aa9.29□□□□□ -0.92
HLA-DMA-203ENST00000395305 GTSF1Q8WW33 167 aa9.29□□□□□ -0.92
HLA-DMA-203ENST00000395305 SMIM7Q9BQ49 75 aa9.29□□□□□ -0.92
HLA-DMA-203ENST00000395305 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
HLA-DMA-203ENST00000395305 APOBP04114 4563 aaKnown RBP9.28□□□□□ -0.92
HLA-DMA-203ENST00000395305 ZNF727A8MUV8 499 aa9.28□□□□□ -0.92
HLA-DMA-203ENST00000395305 FOXA3P55318 350 aaPredicted RBP9.28□□□□□ -0.92
HLA-DMA-203ENST00000395305 Q0VG73 95 aa9.28□□□□□ -0.92
HLA-DMA-203ENST00000395305 MAPKAPK5-AS1Q8N8E1 139 aa9.28□□□□□ -0.92
HLA-DMA-203ENST00000395305 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
HLA-DMA-203ENST00000395305 CHCHD5Q9BSY4 110 aa9.28□□□□□ -0.92
HLA-DMA-203ENST00000395305 KRTAP10-1P60331 282 aa9.27□□□□□ -0.93
HLA-DMA-203ENST00000395305 CT83Q5H943 113 aa9.27□□□□□ -0.93
HLA-DMA-203ENST00000395305 ATRAIDQ6UW56 229 aa9.27□□□□□ -0.93
HLA-DMA-203ENST00000395305 TEX261Q6UWH6 196 aa9.27□□□□□ -0.93
HLA-DMA-203ENST00000395305 LINC01551Q86U37 167 aa9.27□□□□□ -0.93
HLA-DMA-203ENST00000395305 FRZBQ92765 325 aa9.27□□□□□ -0.93
HLA-DMA-203ENST00000395305 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
HLA-DMA-203ENST00000395305 IGLV5-52A0A0A0MRZ9 124 aa9.26□□□□□ -0.93
HLA-DMA-203ENST00000395305 IQCJQ1A5X6 159 aa9.26□□□□□ -0.93
HLA-DMA-203ENST00000395305 FAM74A3Q4VXF1 159 aa9.26□□□□□ -0.93
HLA-DMA-203ENST00000395305 SMIM15Q7Z3B0 74 aa9.26□□□□□ -0.93
HLA-DMA-203ENST00000395305 KRTAP4-5Q9BYR2 181 aa9.26□□□□□ -0.93
HLA-DMA-203ENST00000395305 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
HLA-DMA-203ENST00000395305 IGKV2D-24A0A075B6R9 120 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 IGHV1-24A0A0C4DH33 117 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 ANGP03950 147 aaKnown RBP9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 WFDC2Q14508 124 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 TMEM241Q24JQ0 296 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 Q8N1X5 172 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 C15orf54Q8N8G6 183 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 GATD1Q8NB37 220 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 BAALCQ8WXS3 180 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 PGLYRP4Q96LB8 373 aa9.25□□□□□ -0.93
HLA-DMA-203ENST00000395305 FAM231BA6NCW3 169 aa9.24□□□□□ -0.93
HLA-DMA-203ENST00000395305 XGP55808 180 aa9.24□□□□□ -0.93
HLA-DMA-203ENST00000395305 PEA15Q15121 130 aa9.24□□□□□ -0.93
HLA-DMA-203ENST00000395305 Q8N976 141 aa9.24□□□□□ -0.93
HLA-DMA-203ENST00000395305 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
HLA-DMA-203ENST00000395305 GFRA4Q9GZZ7 299 aa9.24□□□□□ -0.93
HLA-DMA-203ENST00000395305 SMDT1Q9H4I9 107 aa9.24□□□□□ -0.93
HLA-DMA-203ENST00000395305 LECT2O14960 151 aa9.23□□□□□ -0.93
HLA-DMA-203ENST00000395305 RBX1P62877 108 aa9.23□□□□□ -0.93
HLA-DMA-203ENST00000395305 GAGE6Q13070 117 aa9.23□□□□□ -0.93
HLA-DMA-203ENST00000395305 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
HLA-DMA-203ENST00000395305 C1orf43Q9BWL3 253 aa9.23□□□□□ -0.93
HLA-DMA-203ENST00000395305 C9JQL5 133 aa9.22□□□□□ -0.93
HLA-DMA-203ENST00000395305 CRPP02741 224 aa9.22□□□□□ -0.93
HLA-DMA-203ENST00000395305 TMEM243Q9BU79 118 aa9.22□□□□□ -0.93
HLA-DMA-203ENST00000395305 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
HLA-DMA-203ENST00000395305 TRAV26-2A0A0B4J265 109 aa9.21□□□□□ -0.94
HLA-DMA-203ENST00000395305 A0A1B0GUT8 65 aa9.21□□□□□ -0.94
HLA-DMA-203ENST00000395305 A0A1B0GUV1 79 aa9.21□□□□□ -0.94
HLA-DMA-203ENST00000395305 HIGD1CA8MV81 97 aa9.21□□□□□ -0.94
HLA-DMA-203ENST00000395305 COTL1Q14019 142 aa9.21□□□□□ -0.94
HLA-DMA-203ENST00000395305 MIAQ16674 131 aa9.21□□□□□ -0.94
HLA-DMA-203ENST00000395305 TMEM70Q9BUB7 260 aa9.21□□□□□ -0.94
HLA-DMA-203ENST00000395305 RPL23P62829 140 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms