RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 RNASE4P34096 147 aaKnown RBP5.15□□□□□ -1.58
RTN4-205ENST00000394609 IFI27P40305 119 aaPredicted RBP5.15□□□□□ -1.58
RTN4-205ENST00000394609 CKS1BP61024 79 aa5.15□□□□□ -1.58
RTN4-205ENST00000394609 CNFNQ9BYD5 112 aa5.15□□□□□ -1.58
RTN4-205ENST00000394609 GTSF1LQ9H1H1 148 aa5.15□□□□□ -1.58
RTN4-205ENST00000394609 SPANXA1Q9NS26 97 aa5.15□□□□□ -1.58
RTN4-205ENST00000394609 HHLA3Q9XRX5 114 aa5.15□□□□□ -1.58
RTN4-205ENST00000394609 KNCNA6PVL3 124 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 OR11H12B2RN74 326 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 H0Y8G0 127 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 FCER1GP30273 86 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 DEFB131AP59861 70 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 SMAGPQ0VAQ4 97 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 ODF1Q14990 250 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 TWIST1Q15672 202 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 LYZL1Q6UWQ5 148 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.15□□□□□ -1.59
RTN4-205ENST00000394609 OR11H2Q8NH07 326 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 LENEPQ9Y5L5 61 aa5.15□□□□□ -1.59
RTN4-205ENST00000394609 TRBV25-1A0A075B6N4 114 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 A0A0J9YX75 114 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 IGLL5B9A064 214 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 D6R8Y8 96 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.14□□□□□ -1.59
RTN4-205ENST00000394609 DPM2O94777 84 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 NMUP48645 174 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 FXYD2P54710 66 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 GAGE13Q4V321 117 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 LYRM7Q5U5X0 104 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 PCP2Q8IVA1 136 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 RAB37Q96AX2 223 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 ZNF479Q96JC4 524 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 FAM19A4Q96LR4 140 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 MCRIP2Q9BUT9 160 aaKnown RBP5.14□□□□□ -1.59
RTN4-205ENST00000394609 PRO0461Q9UI25 63 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 NOTCH3Q9UM47 2321 aa5.14□□□□□ -1.59
RTN4-205ENST00000394609 TRAV12-2A0A075B6T6 113 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 H3BMG7 143 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 SNAI2O43623 268 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 IGKCP01834 107 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 GCSHP23434 173 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 NDUFA11Q86Y39 141 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 APRG1Q8IVJ8 170 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 SPAG8Q99932 426 aaPredicted RBP5.13□□□□□ -1.59
RTN4-205ENST00000394609 MAP1LC3AQ9H492 121 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 CYSLTR1Q9Y271 337 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 TIMM8BQ9Y5J9 83 aaPredicted RBP5.13□□□□□ -1.59
RTN4-205ENST00000394609 MAST4O15021 2626 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 TRAV12-3A0A0B4J271 114 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 TRAV21A0A0B4J279 112 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 SPRY2O43597 315 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 TSPAN13O95857 204 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 PLNP26678 52 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 FXYD7P58549 80 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 SPINK13Q1W4C9 94 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 RRN3P1Q2M238 152 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 MRPL51Q4U2R6 128 aaKnown RBP5.13□□□□□ -1.59
RTN4-205ENST00000394609 MSRB1Q9NZV6 116 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 ZNF256Q9Y2P7 627 aaPredicted RBP5.13□□□□□ -1.59
RTN4-205ENST00000394609 VWFP04275 2813 aa5.13□□□□□ -1.59
RTN4-205ENST00000394609 KLLNB2CW77 178 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 K7EMI3 77 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 M0QXV9 152 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 GNRH2O43555 120 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 IGLC6P0CF74 106 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 CKS2P33552 79 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 TCTAP57738 103 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 C12orf74Q32Q52 190 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 ANXA2RQ3ZCQ2 193 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 TMEM158Q8WZ71 300 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 CLUHP3Q96NS8 147 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 C1QTNF4Q9BXJ3 329 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 MAP6D1Q9H9H5 199 aa5.12□□□□□ -1.59
RTN4-205ENST00000394609 AGRNO00468 2067 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 TRAV2A0A0B4J234 112 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 TRAV12-1A0A0B4J245 112 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 TRBV7-9A0A0J9YWB2 115 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 H3BMM0 161 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 DUSP14O95147 198 aaKnown RBP5.11□□□□□ -1.59
RTN4-205ENST00000394609 CRYBA4P53673 196 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 WFDC2Q14508 124 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 SPATA3Q8NHX4 192 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 GEMIN7Q9H840 131 aaKnown RBP5.11□□□□□ -1.59
RTN4-205ENST00000394609 NHP2Q9NX24 153 aaKnown RBP5.11□□□□□ -1.59
RTN4-205ENST00000394609 TRAV25A0A0B4J276 109 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 TMEM262E9PQX1 116 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 H3BVH4 76 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 NPYP01303 97 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 S100A4P26447 101 aaKnown RBP5.11□□□□□ -1.59
RTN4-205ENST00000394609 LEPP41159 167 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 FOXI1Q12951 378 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 ODF3L2Q3SX64 289 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 ETDBQ3ZM63 59 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 AMTNQ6UX39 209 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 AMN1Q8IY45 258 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 Q8N1Y9 231 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 Q8N8P6 123 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 NAA38Q9BRA0 125 aaKnown RBP5.11□□□□□ -1.59
RTN4-205ENST00000394609 DKK2Q9UBU2 259 aa5.11□□□□□ -1.59
RTN4-205ENST00000394609 TRBV7-3A0A075B6L6 115 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms