RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 BPESC1Q9GZL8 116 aa8.41□□□□□ -1.06
PDCD4-202ENST00000393104 PHLDA3Q9Y5J5 127 aa8.41□□□□□ -1.06
PDCD4-202ENST00000393104 UBR5O95071 2799 aaPredicted RBP8.41□□□□□ -1.06
PDCD4-202ENST00000393104 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
PDCD4-202ENST00000393104 A8MWV9 139 aa8.41□□□□□ -1.06
PDCD4-202ENST00000393104 TMEM219Q86XT9 240 aa8.41□□□□□ -1.06
PDCD4-202ENST00000393104 C9orf85Q96MD7 179 aa8.41□□□□□ -1.06
PDCD4-202ENST00000393104 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
PDCD4-202ENST00000393104 DOPEY2Q9Y3R5 2298 aa8.4□□□□□ -1.06
PDCD4-202ENST00000393104 PRRC2AP48634 2157 aaKnown RBP8.4□□□□□ -1.06
PDCD4-202ENST00000393104 DCANP1Q8TF63 244 aa8.4□□□□□ -1.06
PDCD4-202ENST00000393104 SPTAN1Q13813 2472 aaKnown RBP8.4□□□□□ -1.06
PDCD4-202ENST00000393104 NBASA2RRP1 2371 aa8.4□□□□□ -1.06
PDCD4-202ENST00000393104 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.06
PDCD4-202ENST00000393104 TRIAP1O43715 76 aa8.4□□□□□ -1.06
PDCD4-202ENST00000393104 TMEM141Q96I45 108 aa8.4□□□□□ -1.06
PDCD4-202ENST00000393104 MDFICQ9P1T7 246 aa8.4□□□□□ -1.06
PDCD4-202ENST00000393104 C9JAW5 83 aa8.4□□□□□ -1.07
PDCD4-202ENST00000393104 NDUFV3P56181 108 aaKnown RBP8.4□□□□□ -1.07
PDCD4-202ENST00000393104 CHD8Q9HCK8 2581 aa8.39□□□□□ -1.07
PDCD4-202ENST00000393104 FBN2P35556 2912 aa8.39□□□□□ -1.07
PDCD4-202ENST00000393104 NSUN5P1Q3KNT7 163 aa8.39□□□□□ -1.07
PDCD4-202ENST00000393104 A0A0J9YX75 114 aa8.39□□□□□ -1.07
PDCD4-202ENST00000393104 J3QKU1 62 aa8.39□□□□□ -1.07
PDCD4-202ENST00000393104 C22orf24Q9Y442 160 aa8.39□□□□□ -1.07
PDCD4-202ENST00000393104 TRBV7-9A0A0J9YWB2 115 aa8.39□□□□□ -1.07
PDCD4-202ENST00000393104 LEPROTO15243 131 aa8.39□□□□□ -1.07
PDCD4-202ENST00000393104 IGHV3-16A0A0C4DH30 117 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 IGLV4-3A0A075B6K6 122 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 H7C423 109 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 OVOL1O14753 267 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 NTN5Q8WTR8 489 aaPredicted RBP8.38□□□□□ -1.07
PDCD4-202ENST00000393104 B5MCH6 92 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 J3QLI3 93 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 IGHV1-69P01742 117 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 ATP5J2P56134 94 aa8.38□□□□□ -1.07
PDCD4-202ENST00000393104 DEFB121Q5J5C9 76 aa8.37□□□□□ -1.07
PDCD4-202ENST00000393104 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
PDCD4-202ENST00000393104 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
PDCD4-202ENST00000393104 A8MZ25 164 aa8.37□□□□□ -1.07
PDCD4-202ENST00000393104 NDUFA4O00483 81 aa8.37□□□□□ -1.07
PDCD4-202ENST00000393104 GAGE5Q13069 117 aa8.37□□□□□ -1.07
PDCD4-202ENST00000393104 GAGE6Q13070 117 aa8.37□□□□□ -1.07
PDCD4-202ENST00000393104 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
PDCD4-202ENST00000393104 IGHV3-64A0A075B6Q5 118 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 TRAV41A0A0B4J266 112 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 IGHV4-61A0A0C4DH41 118 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 TRBV30A0A0K0K1B3 111 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 VCYO14598 125 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 RBMY1A1P0DJD3 496 aaKnown RBP8.36□□□□□ -1.07
PDCD4-202ENST00000393104 RBMY1CP0DJD4 496 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 RBMY1FQ15415 496 aaKnown RBP8.36□□□□□ -1.07
PDCD4-202ENST00000393104 ANAPC13Q9BS18 74 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 CFAP46Q8IYW2 2715 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 CFHR3Q02985 330 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 ZFAND6Q6FIF0 208 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.36□□□□□ -1.07
PDCD4-202ENST00000393104 C20orf203Q8NBC4 194 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 DOPEY1Q5JWR5 2465 aa8.36□□□□□ -1.07
PDCD4-202ENST00000393104 IGHV4-30-2A0A087WSY4 118 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 FAM223BA6NKX1 122 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 FAM223AQ8IWN6 122 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 OR10J6PQ8NGY7 276 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 S100A4P26447 101 aaKnown RBP8.35□□□□□ -1.07
PDCD4-202ENST00000393104 DEFB113Q30KQ7 82 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 PAPPA-AS1Q5QFB9 102 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 Q6Q795 121 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 AKAP6Q13023 2319 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 NPFFO15130 113 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 SCGB2A1O75556 95 aa8.35□□□□□ -1.07
PDCD4-202ENST00000393104 TRAV8-3A0A0A6YYJ7 113 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 CEMP1Q6PRD7 247 aaPredicted RBP8.34□□□□□ -1.07
PDCD4-202ENST00000393104 FSHBP01225 129 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 IGLV1-40P01703 118 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 MSMBP08118 114 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 FLNCQ14315 2725 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 B4DSR2 109 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 PPP1R17O96001 155 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 PROK1P58294 105 aa8.34□□□□□ -1.07
PDCD4-202ENST00000393104 MRPS36P82909 103 aaKnown RBP8.34□□□□□ -1.07
PDCD4-202ENST00000393104 ZNF256Q9Y2P7 627 aaPredicted RBP8.34□□□□□ -1.07
PDCD4-202ENST00000393104 TRAV2A0A0B4J234 112 aa8.33□□□□□ -1.08
PDCD4-202ENST00000393104 CITED2Q99967 270 aaPredicted RBP8.33□□□□□ -1.08
PDCD4-202ENST00000393104 TRAV12-3A0A0B4J271 114 aa8.33□□□□□ -1.08
PDCD4-202ENST00000393104 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
PDCD4-202ENST00000393104 KRTAP1-3Q8IUG1 177 aa8.33□□□□□ -1.08
PDCD4-202ENST00000393104 TEX29Q8N6K0 151 aa8.33□□□□□ -1.08
PDCD4-202ENST00000393104 RHPN1-AS1Q9BWJ2 59 aa8.33□□□□□ -1.08
PDCD4-202ENST00000393104 Q6ZSN1 163 aa8.33□□□□□ -1.08
PDCD4-202ENST00000393104 LINC01356Q8N9X3 169 aa8.33□□□□□ -1.08
PDCD4-202ENST00000393104 TRAV12-2A0A075B6T6 113 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 IGHV3-11P01762 117 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 SDIM1Q6ZPB5 146 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 IGKV3-7A0A075B6H7 116 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 H7C2G1 150 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 SMCR5Q8TEV8 140 aa8.32□□□□□ -1.08
PDCD4-202ENST00000393104 SORL1Q92673 2214 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms