RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 LINC01600Q96MT4 127 aa11.26□□□□□ -0.61
SHTN1-204ENST00000392903 AMELXQ99217 191 aa11.26□□□□□ -0.61
SHTN1-204ENST00000392903 IGIPA6NJ69 53 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 PMVKQ15126 192 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 NDUFA4O00483 81 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 IGHV3-33P01772 117 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 IGHV4-59P01825 116 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 P0DMU3 169 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 FAM231AP0DMU4 169 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 FAM231CP0DMU5 169 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 IFITM1P13164 125 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 GPHB5Q86YW7 130 aa11.25□□□□□ -0.61
SHTN1-204ENST00000392903 TLN2Q9Y4G6 2542 aa11.24□□□□□ -0.61
SHTN1-204ENST00000392903 TRBV7-9A0A0J9YWB2 115 aa11.24□□□□□ -0.61
SHTN1-204ENST00000392903 CRLF1O75462 422 aa11.24□□□□□ -0.61
SHTN1-204ENST00000392903 USMG5Q96IX5 58 aa11.24□□□□□ -0.61
SHTN1-204ENST00000392903 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
SHTN1-204ENST00000392903 RPL32P62910 135 aaKnown RBP11.24□□□□□ -0.61
SHTN1-204ENST00000392903 DEFB112Q30KQ8 113 aa11.24□□□□□ -0.61
SHTN1-204ENST00000392903 TTC32Q5I0X7 151 aa11.24□□□□□ -0.61
SHTN1-204ENST00000392903 TRPT1Q86TN4 253 aaKnown RBP11.24□□□□□ -0.61
SHTN1-204ENST00000392903 CCDC179H3BU77 68 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 MGPP08493 103 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 EDN2P20800 178 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 Q8N1Y9 231 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 TP53TG1Q9Y2A0 90 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 MED14OSP0DP75 135 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 EMP1P54849 157 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 C10orf99Q6UWK7 81 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 POM121L12Q8N7R1 296 aa11.23□□□□□ -0.61
SHTN1-204ENST00000392903 TMEM263Q8WUH6 116 aaKnown RBP11.23□□□□□ -0.61
SHTN1-204ENST00000392903 A0A0B4J2C4 111 aa11.22□□□□□ -0.61
SHTN1-204ENST00000392903 A4D1N5 150 aa11.22□□□□□ -0.61
SHTN1-204ENST00000392903 F6UB75 175 aa11.22□□□□□ -0.61
SHTN1-204ENST00000392903 J3QQQ9 107 aa11.22□□□□□ -0.61
SHTN1-204ENST00000392903 EIF4EBP3O60516 100 aaPredicted RBP11.22□□□□□ -0.61
SHTN1-204ENST00000392903 IGLV1-40P01703 118 aa11.22□□□□□ -0.61
SHTN1-204ENST00000392903 S100A4P26447 101 aaKnown RBP11.22□□□□□ -0.61
SHTN1-204ENST00000392903 RPL13AP40429 203 aaKnown RBP11.22□□□□□ -0.61
SHTN1-204ENST00000392903 NTN5Q8WTR8 489 aaPredicted RBP11.22□□□□□ -0.61
SHTN1-204ENST00000392903 RAX2Q96IS3 184 aa11.22□□□□□ -0.61
SHTN1-204ENST00000392903 SPANXA1Q9NS26 97 aa11.22□□□□□ -0.61
SHTN1-204ENST00000392903 CREBBPQ92793 2442 aa11.22□□□□□ -0.61
SHTN1-204ENST00000392903 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 SHISA2Q6UWI4 295 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 TIMM17AQ99595 171 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 MYO9AB2RTY4 2548 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 SPRY2O43597 315 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 DSCR9P59020 149 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 TMEM170BQ5T4T1 132 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 C9orf139Q6ZV77 190 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 LINC01356Q8N9X3 169 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 RHPN1-AS1Q9BWJ2 59 aa11.21□□□□□ -0.61
SHTN1-204ENST00000392903 IGHV4OR15-8A0A075B7B6 117 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 A0A087WW49 117 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 H3BUA1 57 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 ATXN8Q156A1 80 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 ANXA2RQ3ZCQ2 193 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 SORL1Q92673 2214 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
SHTN1-204ENST00000392903 ZNF876PQ49A33 203 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 LINC01620Q4KN68 170 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
SHTN1-204ENST00000392903 KRTAP10-9P60411 292 aa11.19□□□□□ -0.62
SHTN1-204ENST00000392903 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
SHTN1-204ENST00000392903 TRAV8-4A0A0B4J246 113 aa11.18□□□□□ -0.62
SHTN1-204ENST00000392903 SOCS3O14543 225 aa11.18□□□□□ -0.62
SHTN1-204ENST00000392903 CFHR3Q02985 330 aa11.18□□□□□ -0.62
SHTN1-204ENST00000392903 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
SHTN1-204ENST00000392903 A0A096LNT2 108 aa11.18□□□□□ -0.62
SHTN1-204ENST00000392903 BRI3O95415 125 aa11.18□□□□□ -0.62
SHTN1-204ENST00000392903 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
SHTN1-204ENST00000392903 HERV-K104P63124 156 aa11.18□□□□□ -0.62
SHTN1-204ENST00000392903 DAZ1Q9NQZ3 744 aaKnown RBP11.18□□□□□ -0.62
SHTN1-204ENST00000392903 KIF25-AS1Q9Y6Z4 181 aa11.18□□□□□ -0.62
SHTN1-204ENST00000392903 APCP25054 2843 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 NXPH4O95158 308 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 LINC00315P59091 139 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 ZNF843Q8N446 348 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.17□□□□□ -0.62
SHTN1-204ENST00000392903 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 TEX49A0A1B0GTD5 131 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 ELANEP08246 267 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 SMIM20Q8N5G0 67 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 C15orf53Q8NAA6 179 aa11.17□□□□□ -0.62
SHTN1-204ENST00000392903 VCYO14598 125 aa11.16□□□□□ -0.62
SHTN1-204ENST00000392903 LEPROTO15243 131 aa11.16□□□□□ -0.62
SHTN1-204ENST00000392903 RNASE3P12724 160 aaKnown RBP11.16□□□□□ -0.62
SHTN1-204ENST00000392903 FAM159AQ6UWV7 190 aa11.16□□□□□ -0.62
SHTN1-204ENST00000392903 H7C2G1 150 aa11.16□□□□□ -0.62
SHTN1-204ENST00000392903 PSMB8P28062 276 aa11.16□□□□□ -0.62
SHTN1-204ENST00000392903 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
SHTN1-204ENST00000392903 MRPL23Q16540 153 aaKnown RBP11.16□□□□□ -0.62
SHTN1-204ENST00000392903 ZNF469Q96JG9 3925 aaPredicted RBP11.16□□□□□ -0.62
SHTN1-204ENST00000392903 SONP18583 2426 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms