RNA–Protein interactions for RNA: ENST00000384310.1

RNU6-339P-201, Transcript of RNA, U6 small nuclear 339, pseudogene, humanhuman

BASIC

Gene RNU6-339P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-339P-201ENST00000384310 CCNB3Q8WWL7 1395 aa1.34□□□□□ -2.2
RNU6-339P-201ENST00000384310 CASKIN1Q8WXD9 1431 aa1.33□□□□□ -2.2
RNU6-339P-201ENST00000384310 FBN1P35555 2871 aaKnown RBP1.33□□□□□ -2.2
RNU6-339P-201ENST00000384310 SNCAP37840 140 aa1.33□□□□□ -2.2
RNU6-339P-201ENST00000384310 SPINK13Q1W4C9 94 aa1.33□□□□□ -2.2
RNU6-339P-201ENST00000384310 LINC00474Q9P2X8 69 aa1.33□□□□□ -2.2
RNU6-339P-201ENST00000384310 SORL1Q92673 2214 aa1.33□□□□□ -2.2
RNU6-339P-201ENST00000384310 MAPKBP1O60336 1514 aa1.33□□□□□ -2.2
RNU6-339P-201ENST00000384310 MRC2Q9UBG0 1479 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 A0A087WTM6 91 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 H3BQ15 152 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 Q8N6K4 173 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 TSLPQ969D9 159 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 SCP2D1Q9UJQ7 156 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 TECTAO75443 2155 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 MED13Q9UHV7 2174 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 CNTLNQ9NXG0 1405 aa1.32□□□□□ -2.2
RNU6-339P-201ENST00000384310 PLXNA2O75051 1894 aa1.31□□□□□ -2.2
RNU6-339P-201ENST00000384310 PPP1R17O96001 155 aa1.31□□□□□ -2.2
RNU6-339P-201ENST00000384310 GNG11P61952 73 aa1.31□□□□□ -2.2
RNU6-339P-201ENST00000384310 QRICH2Q9H0J4 1663 aa1.31□□□□□ -2.2
RNU6-339P-201ENST00000384310 PEAK1Q9H792 1746 aa1.31□□□□□ -2.2
RNU6-339P-201ENST00000384310 PPIP5K1Q6PFW1 1433 aa1.31□□□□□ -2.2
RNU6-339P-201ENST00000384310 RP1L1Q8IWN7 2480 aaPredicted RBP1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 NCOA6Q14686 2063 aaPredicted RBP1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 RREB1Q92766 1687 aa1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 MUC22E2RYF6 1773 aaPredicted RBP1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 DLEC1Q9Y238 1755 aa1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 TRBV7-3A0A075B6L6 115 aa1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 LY6G6CO95867 125 aa1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 PKIAP61925 76 aa1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 KRTAP5-2Q701N4 177 aa1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 ATG2AQ2TAZ0 1938 aa1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 C10orf71Q711Q0 1435 aa1.3□□□□□ -2.2
RNU6-339P-201ENST00000384310 KDM6BO15054 1643 aa1.29□□□□□ -2.2
RNU6-339P-201ENST00000384310 BCORL1Q5H9F3 1711 aa1.29□□□□□ -2.2
RNU6-339P-201ENST00000384310 MPC2O95563 127 aa1.29□□□□□ -2.2
RNU6-339P-201ENST00000384310 SPINT3P49223 89 aa1.29□□□□□ -2.2
RNU6-339P-201ENST00000384310 R4GMQ9 66 aa1.29□□□□□ -2.2
RNU6-339P-201ENST00000384310 VPS8Q8N3P4 1428 aa1.29□□□□□ -2.2
RNU6-339P-201ENST00000384310 MYH9P35579 1960 aaKnown RBP1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 SNRNP200O75643 2136 aaKnown RBP1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 TRGV1A0A0A0MS02 117 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 FXYD6P3P58550 94 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 KRTAP10-4P60372 401 aaPredicted RBP1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 SPAG11BQ08648 103 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 SPAG11AQ6PDA7 123 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 Q96NJ1 140 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 MGST2Q99735 147 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 WFDC6Q9BQY6 131 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 SCAPERQ9BY12 1400 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 ZFYVE16Q7Z3T8 1539 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 NRKQ7Z2Y5 1582 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 CUL7Q14999 1698 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 LAMB1P07942 1786 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 ZGRF1Q86YA3 2104 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 SPAG17Q6Q759 2223 aa1.28□□□□□ -2.2
RNU6-339P-201ENST00000384310 A0A096LNT2 108 aa1.27□□□□□ -2.21
RNU6-339P-201ENST00000384310 NAP1L6A6NFF2 107 aa1.27□□□□□ -2.21
RNU6-339P-201ENST00000384310 F2Z2F3 143 aa1.27□□□□□ -2.21
RNU6-339P-201ENST00000384310 ACYP2P14621 99 aa1.27□□□□□ -2.21
RNU6-339P-201ENST00000384310 COL5A1-AS1Q5SY13 56 aa1.27□□□□□ -2.21
RNU6-339P-201ENST00000384310 DYNLRB1Q9NP97 96 aa1.27□□□□□ -2.21
RNU6-339P-201ENST00000384310 AP4S1Q9Y587 144 aa1.27□□□□□ -2.21
RNU6-339P-201ENST00000384310 LENEPQ9Y5L5 61 aa1.27□□□□□ -2.21
RNU6-339P-201ENST00000384310 ZNF142P52746 1687 aaPredicted RBP1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 NOTCH2Q04721 2471 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 CHKB-CPT1BH3BT56 60 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 K7EIL1 84 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 GNGT2O14610 69 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 LINC00032P0C843 101 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 KRTDAPP60985 99 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 RPL37P61927 97 aaKnown RBP1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 BAGE3Q86Y29 109 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 DPY30Q9C005 99 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 ARAP2Q8WZ64 1704 aa1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 FLG2Q5D862 2391 aaPredicted RBP1.26□□□□□ -2.21
RNU6-339P-201ENST00000384310 MED12Q93074 2177 aa1.25□□□□□ -2.21
RNU6-339P-201ENST00000384310 OBSCNQ5VST9 7968 aa1.25□□□□□ -2.21
RNU6-339P-201ENST00000384310 FAM213BQ8TBF2 198 aa1.25□□□□□ -2.21
RNU6-339P-201ENST00000384310 MANBALQ9NQG1 85 aa1.25□□□□□ -2.21
RNU6-339P-201ENST00000384310 NDUFA4L2Q9NRX3 87 aa1.25□□□□□ -2.21
RNU6-339P-201ENST00000384310 UQCR10Q9UDW1 63 aa1.25□□□□□ -2.21
RNU6-339P-201ENST00000384310 CITO14578 2027 aa1.25□□□□□ -2.21
RNU6-339P-201ENST00000384310 hADV29S1A0JD25 119 aa1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 CCL18P55774 89 aa1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 UBA52P62987 128 aaKnown RBP1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 SPINK9Q5DT21 86 aa1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 VMO1Q7Z5L0 202 aa1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 SNHG12Q9BXW3 62 aa1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 V9GYH0 126 aa1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 SMARCA2P51531 1590 aa1.24□□□□□ -2.21
RNU6-339P-201ENST00000384310 NRXN2Q9P2S2 1712 aa1.23□□□□□ -2.21
RNU6-339P-201ENST00000384310 LOC285095A0A1B0GVY8 99 aa1.23□□□□□ -2.21
RNU6-339P-201ENST00000384310 M0R135 149 aa1.23□□□□□ -2.21
RNU6-339P-201ENST00000384310 MT-ATP8P03928 68 aa1.23□□□□□ -2.21
RNU6-339P-201ENST00000384310 SEC11AP67812 179 aa1.23□□□□□ -2.21
RNU6-339P-201ENST00000384310 Q0VG73 95 aa1.23□□□□□ -2.21
RNU6-339P-201ENST00000384310 AFDNP55196 1824 aaKnown RBP1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms