RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 GCHFRP30047 84 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 SELENOWP63302 87 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 PDCD10Q9BUL8 212 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 SEC11CQ9BY50 192 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 FAM107BQ9H098 131 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 NAV2Q8IVL1 2488 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 ARFGEF1Q9Y6D6 1849 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 MYO7AQ13402 2215 aa0.61□□□□□ -2.31
RNU6-40P-201ENST00000384254 BDP1A6H8Y1 2624 aa0.6□□□□□ -2.31
RNU6-40P-201ENST00000384254 DOCK11Q5JSL3 2073 aa0.6□□□□□ -2.31
RNU6-40P-201ENST00000384254 TRBV10-3A0A0K0K1G6 114 aa0.6□□□□□ -2.31
RNU6-40P-201ENST00000384254 HMGN1P05114 100 aa0.6□□□□□ -2.31
RNU6-40P-201ENST00000384254 Q6ZRX8 168 aa0.6□□□□□ -2.31
RNU6-40P-201ENST00000384254 ARL11Q969Q4 196 aa0.6□□□□□ -2.31
RNU6-40P-201ENST00000384254 GRIN2AQ12879 1464 aa0.6□□□□□ -2.31
RNU6-40P-201ENST00000384254 MYOM3Q5VTT5 1437 aa0.59□□□□□ -2.31
RNU6-40P-201ENST00000384254 NMBP08949 121 aa0.59□□□□□ -2.31
RNU6-40P-201ENST00000384254 INSL4Q14641 139 aa0.59□□□□□ -2.31
RNU6-40P-201ENST00000384254 CCL8P80075 99 aa0.58□□□□□ -2.32
RNU6-40P-201ENST00000384254 ZNF518AQ6AHZ1 1483 aa0.58□□□□□ -2.32
RNU6-40P-201ENST00000384254 UNC13BO14795 1591 aa0.57□□□□□ -2.32
RNU6-40P-201ENST00000384254 HIST1H1DP16402 221 aaKnown RBP0.57□□□□□ -2.32
RNU6-40P-201ENST00000384254 MYH9P35579 1960 aaKnown RBP0.57□□□□□ -2.32
RNU6-40P-201ENST00000384254 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
RNU6-40P-201ENST00000384254 WFDC6Q9BQY6 131 aa0.56□□□□□ -2.32
RNU6-40P-201ENST00000384254 LINC00470Q9BZP3 86 aa0.56□□□□□ -2.32
RNU6-40P-201ENST00000384254 LINC00312Q9Y6C7 94 aa0.56□□□□□ -2.32
RNU6-40P-201ENST00000384254 SSC5DA1L4H1 1573 aa0.55□□□□□ -2.32
RNU6-40P-201ENST00000384254 CADP27708 2225 aa0.55□□□□□ -2.32
RNU6-40P-201ENST00000384254 NDUFA2O43678 99 aa0.55□□□□□ -2.32
RNU6-40P-201ENST00000384254 BICRAQ9NZM4 1560 aa0.54□□□□□ -2.32
RNU6-40P-201ENST00000384254 UNC79Q9P2D8 2635 aa0.54□□□□□ -2.32
RNU6-40P-201ENST00000384254 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
RNU6-40P-201ENST00000384254 TRAV1-2A0A0B4J238 106 aa0.53□□□□□ -2.32
RNU6-40P-201ENST00000384254 CLPSL1A2RUU4 121 aa0.53□□□□□ -2.32
RNU6-40P-201ENST00000384254 SPINK1P00995 79 aa0.53□□□□□ -2.32
RNU6-40P-201ENST00000384254 C12orf73Q69YU5 71 aa0.53□□□□□ -2.32
RNU6-40P-201ENST00000384254 AGPAT4-IT1Q9H0P7 198 aa0.53□□□□□ -2.32
RNU6-40P-201ENST00000384254 RERGLQ9H628 205 aa0.53□□□□□ -2.32
RNU6-40P-201ENST00000384254 IFT140Q96RY7 1462 aa0.53□□□□□ -2.33
RNU6-40P-201ENST00000384254 CACNA1HO95180 2353 aa0.53□□□□□ -2.33
RNU6-40P-201ENST00000384254 TTC28Q96AY4 2481 aa0.53□□□□□ -2.33
RNU6-40P-201ENST00000384254 NWD2Q9ULI1 1742 aa0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 TPRP12270 2363 aaKnown RBP0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 GNG7O60262 68 aa0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 Q5BKY6 102 aa0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 BAGE3Q86Y29 109 aa0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 UBE2DNLQ8IWF7 75 aa0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 FAM213BQ8TBF2 198 aa0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 AQP10Q96PS8 301 aa0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 LRRC37A3O60309 1634 aa0.52□□□□□ -2.33
RNU6-40P-201ENST00000384254 SNRNP25Q9BV90 132 aaKnown RBP0.51□□□□□ -2.33
RNU6-40P-201ENST00000384254 SIPA1L3O60292 1781 aaPredicted RBP0.5□□□□□ -2.33
RNU6-40P-201ENST00000384254 DSTQ03001 7570 aaKnown RBP0.5□□□□□ -2.33
RNU6-40P-201ENST00000384254 CFTRP13569 1480 aa0.5□□□□□ -2.33
RNU6-40P-201ENST00000384254 SIX6O95475 246 aa0.5□□□□□ -2.33
RNU6-40P-201ENST00000384254 MEIG1Q5JSS6 88 aa0.5□□□□□ -2.33
RNU6-40P-201ENST00000384254 NAA60Q9H7X0 242 aa0.5□□□□□ -2.33
RNU6-40P-201ENST00000384254 SERP1Q9Y6X1 66 aa0.5□□□□□ -2.33
RNU6-40P-201ENST00000384254 NAIPQ13075 1403 aa0.49□□□□□ -2.33
RNU6-40P-201ENST00000384254 CASKIN1Q8WXD9 1431 aa0.49□□□□□ -2.33
RNU6-40P-201ENST00000384254 MYH8P13535 1937 aa0.49□□□□□ -2.33
RNU6-40P-201ENST00000384254 TRAV13-2A0A0B4J235 113 aa0.49□□□□□ -2.33
RNU6-40P-201ENST00000384254 HCG22E2RYF7 251 aa0.49□□□□□ -2.33
RNU6-40P-201ENST00000384254 RBM3P98179 157 aaKnown RBP0.49□□□□□ -2.33
RNU6-40P-201ENST00000384254 Q5VV11 94 aa0.49□□□□□ -2.33
RNU6-40P-201ENST00000384254 ABCA12Q86UK0 2595 aa0.48□□□□□ -2.33
RNU6-40P-201ENST00000384254 C1orf54Q8WWF1 131 aa0.48□□□□□ -2.33
RNU6-40P-201ENST00000384254 MYH7P12883 1935 aa0.48□□□□□ -2.33
RNU6-40P-201ENST00000384254 NEBP20929 6669 aa0.47□□□□□ -2.33
RNU6-40P-201ENST00000384254 K7EP13 123 aa0.47□□□□□ -2.33
RNU6-40P-201ENST00000384254 PIN1P1O15428 100 aa0.47□□□□□ -2.33
RNU6-40P-201ENST00000384254 PPP1R17O96001 155 aa0.47□□□□□ -2.33
RNU6-40P-201ENST00000384254 R4GMQ9 66 aa0.47□□□□□ -2.33
RNU6-40P-201ENST00000384254 GOLGA3Q08378 1498 aa0.47□□□□□ -2.33
RNU6-40P-201ENST00000384254 COL6A3P12111 3177 aa0.47□□□□□ -2.33
RNU6-40P-201ENST00000384254 C10orf128Q5T292 105 aa0.46□□□□□ -2.34
RNU6-40P-201ENST00000384254 Q6AWC8 147 aa0.46□□□□□ -2.34
RNU6-40P-201ENST00000384254 PTPRZ1P23471 2315 aaPredicted RBP0.46□□□□□ -2.34
RNU6-40P-201ENST00000384254 SYNE2Q8WXH0 6885 aaKnown RBP0.45□□□□□ -2.34
RNU6-40P-201ENST00000384254 NPVFQ9HCQ7 196 aa0.45□□□□□ -2.34
RNU6-40P-201ENST00000384254 ZMYM4Q5VZL5 1548 aa0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 FSIP2Q5CZC0 6907 aa0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 SPAARA0A1B0GVQ0 90 aa0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 ZNF815PA8K554 130 aa0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 CFAP126Q5VTH2 177 aa0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 SSBP3-AS1Q7Z2R9 100 aa0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 LSM10Q969L4 123 aaKnown RBP0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 MAST4O15021 2626 aa0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 IFT172Q9UG01 1749 aa0.44□□□□□ -2.34
RNU6-40P-201ENST00000384254 Q56UQ5 140 aa0.43□□□□□ -2.34
RNU6-40P-201ENST00000384254 TTC9CQ8N5M4 171 aa0.43□□□□□ -2.34
RNU6-40P-201ENST00000384254 Q8N8P6 123 aa0.43□□□□□ -2.34
RNU6-40P-201ENST00000384254 PPP3R2Q96LZ3 170 aa0.43□□□□□ -2.34
RNU6-40P-201ENST00000384254 PXDNQ92626 1479 aa0.42□□□□□ -2.34
RNU6-40P-201ENST00000384254 A0A0D9SFI3 127 aa0.42□□□□□ -2.34
RNU6-40P-201ENST00000384254 G3V318 75 aa0.42□□□□□ -2.34
RNU6-40P-201ENST00000384254 FGF7P21781 194 aa0.42□□□□□ -2.34
RNU6-40P-201ENST00000384254 CCL18P55774 89 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms