RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 IGHG4P01861 327 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 GAGE2AQ6NT46 116 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 SLC25A29Q8N8R3 303 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 TMEM190Q8WZ59 177 aa9.23□□□□□ -0.93
SHOX-203ENST00000381578 OVOL3O00110 214 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 IGHV3-33P01772 117 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 SAA4P35542 130 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 ID1P41134 155 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 UBE2E1P51965 193 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 RHPN1-AS1Q9BWJ2 59 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 IGHV3-38A0A0C4DH36 116 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 A8MZ25 164 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
SHOX-203ENST00000381578 ZNF580Q9UK33 172 aa9.22□□□□□ -0.93
SHOX-203ENST00000381578 TRIAP1O43715 76 aa9.21□□□□□ -0.93
SHOX-203ENST00000381578 UBE2D3P61077 147 aa9.21□□□□□ -0.93
SHOX-203ENST00000381578 UBE2D2P62837 147 aa9.21□□□□□ -0.93
SHOX-203ENST00000381578 TRGV11A0A075B6L2 103 aa9.21□□□□□ -0.94
SHOX-203ENST00000381578 TRAV41A0A0B4J266 112 aa9.21□□□□□ -0.94
SHOX-203ENST00000381578 SPINK13Q1W4C9 94 aa9.21□□□□□ -0.94
SHOX-203ENST00000381578 FAM110DQ8TAY7 271 aaPredicted RBP9.21□□□□□ -0.94
SHOX-203ENST00000381578 TMEM141Q96I45 108 aa9.21□□□□□ -0.94
SHOX-203ENST00000381578 CNFNQ9BYD5 112 aa9.2□□□□□ -0.94
SHOX-203ENST00000381578 TOMM7Q9P0U1 55 aa9.2□□□□□ -0.94
SHOX-203ENST00000381578 F8W735 103 aaPredicted RBP9.2□□□□□ -0.94
SHOX-203ENST00000381578 UNQ9165/PRO28630Q6UXU0 137 aa9.2□□□□□ -0.94
SHOX-203ENST00000381578 ZNRF2Q8NHG8 242 aa9.2□□□□□ -0.94
SHOX-203ENST00000381578 C20orf173Q96LM9 149 aa9.2□□□□□ -0.94
SHOX-203ENST00000381578 RAI1Q7Z5J4 1906 aaPredicted RBP9.2□□□□□ -0.94
SHOX-203ENST00000381578 TRBV10-2A0A0K0K1G8 114 aa9.2□□□□□ -0.94
SHOX-203ENST00000381578 TRBV12-3P01733 135 aa9.2□□□□□ -0.94
SHOX-203ENST00000381578 ICOSQ9Y6W8 199 aa9.2□□□□□ -0.94
SHOX-203ENST00000381578 SYNJ2BPP57105 145 aa9.19□□□□□ -0.94
SHOX-203ENST00000381578 ELANEP08246 267 aa9.19□□□□□ -0.94
SHOX-203ENST00000381578 DNAL4O96015 105 aa9.18□□□□□ -0.94
SHOX-203ENST00000381578 HOXD3P31249 432 aaPredicted RBP9.18□□□□□ -0.94
SHOX-203ENST00000381578 YAE1D1Q9NRH1 226 aa9.18□□□□□ -0.94
SHOX-203ENST00000381578 IGHV3-16A0A0C4DH30 117 aa9.18□□□□□ -0.94
SHOX-203ENST00000381578 NPFFO15130 113 aa9.18□□□□□ -0.94
SHOX-203ENST00000381578 Q8N9W7 124 aa9.18□□□□□ -0.94
SHOX-203ENST00000381578 NPBQ8NG41 125 aa9.18□□□□□ -0.94
SHOX-203ENST00000381578 OR13C6PQ8NH95 151 aa9.18□□□□□ -0.94
SHOX-203ENST00000381578 CCDC140Q96MF4 163 aa9.18□□□□□ -0.94
SHOX-203ENST00000381578 TRBV7-1A0A0A6YYK4 115 aa9.17□□□□□ -0.94
SHOX-203ENST00000381578 TRAV13-1A0A0B4J241 112 aa9.17□□□□□ -0.94
SHOX-203ENST00000381578 LEPROTO15243 131 aa9.17□□□□□ -0.94
SHOX-203ENST00000381578 C9orf47Q6ZRZ4 202 aa9.17□□□□□ -0.94
SHOX-203ENST00000381578 MAPK1IP1LQ8NDC0 245 aa9.17□□□□□ -0.94
SHOX-203ENST00000381578 C11orf44Q8N8P7 122 aa9.17□□□□□ -0.94
SHOX-203ENST00000381578 LY6G5BQ8NDX9 201 aa9.17□□□□□ -0.94
SHOX-203ENST00000381578 ZNF22P17026 224 aaPredicted RBP9.17□□□□□ -0.94
SHOX-203ENST00000381578 MDFICQ9P1T7 246 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.16□□□□□ -0.94
SHOX-203ENST00000381578 IGKV2-29A2NJV5 120 aaPredicted RBP9.16□□□□□ -0.94
SHOX-203ENST00000381578 P0DMU3 169 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 FAM231AP0DMU4 169 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 FAM231CP0DMU5 169 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 IGHV3-30-3P0DP02 117 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 IGHV1-69DA0A0B4J2H0 117 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 A0A0J9YXY3 114 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 BPESC1Q9GZL8 116 aa9.16□□□□□ -0.94
SHOX-203ENST00000381578 M0R1W7 72 aa9.15□□□□□ -0.94
SHOX-203ENST00000381578 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.94
SHOX-203ENST00000381578 ZFAND2AQ8N6M9 145 aa9.15□□□□□ -0.94
SHOX-203ENST00000381578 IGLV4-69A0A075B6H9 119 aa9.15□□□□□ -0.94
SHOX-203ENST00000381578 CLPSL1A2RUU4 121 aa9.15□□□□□ -0.94
SHOX-203ENST00000381578 SNRPD3P62318 126 aaKnown RBP9.15□□□□□ -0.94
SHOX-203ENST00000381578 HIST1H4AP62805 103 aaKnown RBP9.15□□□□□ -0.94
SHOX-203ENST00000381578 CRYGDP07320 174 aa9.15□□□□□ -0.95
SHOX-203ENST00000381578 LGALS9O00182 355 aa9.14□□□□□ -0.95
SHOX-203ENST00000381578 MINOS1Q5TGZ0 78 aa9.14□□□□□ -0.95
SHOX-203ENST00000381578 KLK5Q9Y337 293 aaPredicted RBP9.14□□□□□ -0.95
SHOX-203ENST00000381578 OOSP1A8MZH6 123 aa9.14□□□□□ -0.95
SHOX-203ENST00000381578 LY6LH3BQJ8 138 aa9.14□□□□□ -0.95
SHOX-203ENST00000381578 GNLYP22749 145 aa9.14□□□□□ -0.95
SHOX-203ENST00000381578 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
SHOX-203ENST00000381578 I3L3M4 83 aa9.14□□□□□ -0.95
SHOX-203ENST00000381578 NHLRC4P0CG21 123 aaPredicted RBP9.13□□□□□ -0.95
SHOX-203ENST00000381578 PRIMA1Q86XR5 153 aa9.13□□□□□ -0.95
SHOX-203ENST00000381578 CCL19Q99731 98 aa9.13□□□□□ -0.95
SHOX-203ENST00000381578 IGKV3D-7A0A0C4DH55 119 aa9.13□□□□□ -0.95
SHOX-203ENST00000381578 M0QXV9 152 aa9.13□□□□□ -0.95
SHOX-203ENST00000381578 TMEM263Q8WUH6 116 aaKnown RBP9.13□□□□□ -0.95
SHOX-203ENST00000381578 TSHBP01222 138 aa9.13□□□□□ -0.95
SHOX-203ENST00000381578 RNASE3P12724 160 aaKnown RBP9.13□□□□□ -0.95
SHOX-203ENST00000381578 ZFP36P26651 326 aaKnown RBP9.13□□□□□ -0.95
SHOX-203ENST00000381578 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
SHOX-203ENST00000381578 MINOS1-NBL1R4GNA1 71 aa9.13□□□□□ -0.95
SHOX-203ENST00000381578 LINC01619G3V211 115 aa9.12□□□□□ -0.95
SHOX-203ENST00000381578 COX6B1P14854 86 aa9.12□□□□□ -0.95
SHOX-203ENST00000381578 ADORA2A-AS1P86434 159 aa9.12□□□□□ -0.95
SHOX-203ENST00000381578 C19orf54Q5BKX5 351 aa9.12□□□□□ -0.95
SHOX-203ENST00000381578 LOC107984640A0A0U1RRK4 108 aa9.12□□□□□ -0.95
SHOX-203ENST00000381578 H7C423 109 aa9.12□□□□□ -0.95
SHOX-203ENST00000381578 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
SHOX-203ENST00000381578 C11orf68Q9H3H3 251 aaKnown RBP9.11□□□□□ -0.95
SHOX-203ENST00000381578 Q9HAA7 133 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms