RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GAGE4Q13068 117 aa8.77□□□□□ -1.01
SMN1-202ENST00000380707 GAGE5Q13069 117 aa8.77□□□□□ -1.01
SMN1-202ENST00000380707 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
SMN1-202ENST00000380707 AMN1Q8IY45 258 aa8.77□□□□□ -1.01
SMN1-202ENST00000380707 RNF185Q96GF1 192 aa8.77□□□□□ -1.01
SMN1-202ENST00000380707 DNAH6Q9C0G6 4158 aa8.76□□□□□ -1.01
SMN1-202ENST00000380707 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
SMN1-202ENST00000380707 LINC00694P0DN24 101 aa8.76□□□□□ -1.01
SMN1-202ENST00000380707 RAB4AP20338 218 aa8.76□□□□□ -1.01
SMN1-202ENST00000380707 S100PP25815 95 aa8.76□□□□□ -1.01
SMN1-202ENST00000380707 GATD1Q8NB37 220 aa8.76□□□□□ -1.01
SMN1-202ENST00000380707 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
SMN1-202ENST00000380707 RYR2Q92736 4967 aa8.76□□□□□ -1.01
SMN1-202ENST00000380707 KRTAP9-6A0A140TA67 174 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 S100A8P05109 93 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 ESRGQ1W209 222 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 NEGR1Q7Z3B1 354 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 ZNRF2Q8NHG8 242 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 RYR3Q15413 4870 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 TRAV9-1A0A075B6T8 112 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 H7C1H1 209 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 J3QL48 77 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 GAS8-AS1O95177 125 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 RASL11AQ6T310 242 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
SMN1-202ENST00000380707 RPL36AP83881 106 aaKnown RBP8.74□□□□□ -1.01
SMN1-202ENST00000380707 MRPL51Q4U2R6 128 aaKnown RBP8.74□□□□□ -1.01
SMN1-202ENST00000380707 LGALS9CQ6DKI2 356 aa8.74□□□□□ -1.01
SMN1-202ENST00000380707 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
SMN1-202ENST00000380707 LINC00476Q8WZB0 136 aa8.74□□□□□ -1.01
SMN1-202ENST00000380707 RPL36ALQ969Q0 106 aaKnown RBP8.74□□□□□ -1.01
SMN1-202ENST00000380707 RPL39LQ96EH5 51 aaKnown RBP8.74□□□□□ -1.01
SMN1-202ENST00000380707 LINC00588Q9Y4M8 146 aa8.74□□□□□ -1.01
SMN1-202ENST00000380707 SMKR1H3BMG3 65 aa8.73□□□□□ -1.01
SMN1-202ENST00000380707 CCL18P55774 89 aa8.73□□□□□ -1.01
SMN1-202ENST00000380707 UBE2D3P61077 147 aa8.73□□□□□ -1.01
SMN1-202ENST00000380707 UBE2D2P62837 147 aa8.73□□□□□ -1.01
SMN1-202ENST00000380707 ELOBQ15370 118 aa8.73□□□□□ -1.01
SMN1-202ENST00000380707 ATP6V0E2Q8NHE4 81 aa8.73□□□□□ -1.01
SMN1-202ENST00000380707 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
SMN1-202ENST00000380707 TGIF2-C20orf24A0A0A6YYL0 155 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 LY6G6CO95867 125 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 NCR2O95944 276 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 CBLN2Q8IUK8 224 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 FRZBQ92765 325 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 MRAP2Q96G30 205 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 DNAJC30Q96LL9 226 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 GTSF1LQ9H1H1 148 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 TNFRSF18Q9Y5U5 241 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 DNAH2Q9P225 4427 aa8.72□□□□□ -1.01
SMN1-202ENST00000380707 RPS10P46783 165 aaKnown RBP8.71□□□□□ -1.01
SMN1-202ENST00000380707 TMEM136Q6ZRR5 245 aa8.71□□□□□ -1.01
SMN1-202ENST00000380707 UBE2DNLQ8IWF7 75 aa8.71□□□□□ -1.01
SMN1-202ENST00000380707 YPEL4Q96NS1 127 aa8.71□□□□□ -1.01
SMN1-202ENST00000380707 IGHV3-38A0A0C4DH36 116 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 TRBV24-1A0A075B6N3 115 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 LCE6AA0A183 80 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 D6R8Y8 96 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 CKS2P33552 79 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 TIRAPP58753 221 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 OR10J3Q5JRS4 329 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 NRACQ8N912 160 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 SMCO4Q9NRQ5 59 aa8.7□□□□□ -1.02
SMN1-202ENST00000380707 DAZ4Q86SG3 579 aaKnown RBP8.69□□□□□ -1.02
SMN1-202ENST00000380707 GNB1LQ9BYB4 327 aa8.69□□□□□ -1.02
SMN1-202ENST00000380707 DAZ3Q9NR90 486 aaKnown RBP8.69□□□□□ -1.02
SMN1-202ENST00000380707 MRPS16Q9Y3D3 137 aaKnown RBP8.69□□□□□ -1.02
SMN1-202ENST00000380707 FRAS1Q86XX4 4008 aa8.68□□□□□ -1.02
SMN1-202ENST00000380707 TRBV6-5A0A0K0K1A5 114 aa8.68□□□□□ -1.02
SMN1-202ENST00000380707 ATP6V1G1O75348 118 aa8.68□□□□□ -1.02
SMN1-202ENST00000380707 DEFB104AQ8WTQ1 72 aa8.68□□□□□ -1.02
SMN1-202ENST00000380707 UPK3BQ9BT76 320 aa8.68□□□□□ -1.02
SMN1-202ENST00000380707 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
SMN1-202ENST00000380707 SCO1O75880 301 aa8.67□□□□□ -1.02
SMN1-202ENST00000380707 HLA-DQA1P01909 254 aa8.67□□□□□ -1.02
SMN1-202ENST00000380707 LELP1Q5T871 98 aa8.67□□□□□ -1.02
SMN1-202ENST00000380707 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
SMN1-202ENST00000380707 ORMDL3Q8N138 153 aa8.67□□□□□ -1.02
SMN1-202ENST00000380707 ST20Q9HBF5 79 aa8.67□□□□□ -1.02
SMN1-202ENST00000380707 DNAH10Q8IVF4 4471 aa8.67□□□□□ -1.02
SMN1-202ENST00000380707 TNFRSF6BO95407 300 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 PPP1R17O96001 155 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 APCSP02743 223 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 PPBPP02775 128 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 KIAA1644Q3SXP7 199 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 COX19Q49B96 90 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 WFDC10BQ8IUB3 73 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.66□□□□□ -1.02
SMN1-202ENST00000380707 TMEM70Q9BUB7 260 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 Q9H8V8 135 aa8.66□□□□□ -1.02
SMN1-202ENST00000380707 TRBV6-8A0A0A6YYG3 113 aa8.65□□□□□ -1.02
SMN1-202ENST00000380707 NPYP01303 97 aa8.65□□□□□ -1.02
SMN1-202ENST00000380707 POLR2KP53803 58 aaKnown RBP8.65□□□□□ -1.02
SMN1-202ENST00000380707 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.02
SMN1-202ENST00000380707 PRELID3AQ96N28 172 aa8.65□□□□□ -1.02
SMN1-202ENST00000380707 MT-ND6P03923 174 aa8.64□□□□□ -1.03
SMN1-202ENST00000380707 S100A1P23297 94 aa8.64□□□□□ -1.03
SMN1-202ENST00000380707 XP32Q5T750 250 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms