RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 GNRH2O43555 120 aa10.41□□□□□ -0.74
SNCAIP-203ENST00000379538 ZNF688P0C7X2 276 aa10.41□□□□□ -0.74
SNCAIP-203ENST00000379538 C20orf173Q96LM9 149 aa10.41□□□□□ -0.74
SNCAIP-203ENST00000379538 TRAV4A0A0B4J268 109 aa10.41□□□□□ -0.74
SNCAIP-203ENST00000379538 A6NJY4 79 aa10.41□□□□□ -0.74
SNCAIP-203ENST00000379538 C9JAW5 83 aa10.41□□□□□ -0.74
SNCAIP-203ENST00000379538 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
SNCAIP-203ENST00000379538 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
SNCAIP-203ENST00000379538 F6UB75 175 aa10.4□□□□□ -0.74
SNCAIP-203ENST00000379538 S100A4P26447 101 aaKnown RBP10.4□□□□□ -0.74
SNCAIP-203ENST00000379538 ORMDL2Q53FV1 153 aa10.4□□□□□ -0.74
SNCAIP-203ENST00000379538 TMEM170BQ5T4T1 132 aa10.4□□□□□ -0.74
SNCAIP-203ENST00000379538 LINC01619G3V211 115 aa10.4□□□□□ -0.74
SNCAIP-203ENST00000379538 EBI3Q14213 229 aa10.4□□□□□ -0.74
SNCAIP-203ENST00000379538 CCDC140Q96MF4 163 aa10.4□□□□□ -0.74
SNCAIP-203ENST00000379538 IGHV3-30P01768 117 aa10.39□□□□□ -0.75
SNCAIP-203ENST00000379538 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
SNCAIP-203ENST00000379538 ZFAND6Q6FIF0 208 aa10.39□□□□□ -0.75
SNCAIP-203ENST00000379538 TEX29Q8N6K0 151 aa10.39□□□□□ -0.75
SNCAIP-203ENST00000379538 TMEM190Q8WZ59 177 aa10.39□□□□□ -0.75
SNCAIP-203ENST00000379538 SLC50A1Q9BRV3 221 aa10.39□□□□□ -0.75
SNCAIP-203ENST00000379538 TP53TG1Q9Y2A0 90 aa10.39□□□□□ -0.75
SNCAIP-203ENST00000379538 CCDC179H3BU77 68 aa10.38□□□□□ -0.75
SNCAIP-203ENST00000379538 C5orf56Q8N8D9 126 aa10.38□□□□□ -0.75
SNCAIP-203ENST00000379538 PHLDA3Q9Y5J5 127 aa10.38□□□□□ -0.75
SNCAIP-203ENST00000379538 OOSP1A8MZH6 123 aa10.38□□□□□ -0.75
SNCAIP-203ENST00000379538 C10orf126Q8N4M7 172 aa10.38□□□□□ -0.75
SNCAIP-203ENST00000379538 ZNRF2Q8NHG8 242 aa10.38□□□□□ -0.75
SNCAIP-203ENST00000379538 C16orf92Q96LL3 132 aa10.38□□□□□ -0.75
SNCAIP-203ENST00000379538 ZNF580Q9UK33 172 aa10.38□□□□□ -0.75
SNCAIP-203ENST00000379538 SLC25A20O43772 301 aa10.37□□□□□ -0.75
SNCAIP-203ENST00000379538 C10orf99Q6UWK7 81 aa10.37□□□□□ -0.75
SNCAIP-203ENST00000379538 IGHV4-4A0A075B6R2 117 aa10.37□□□□□ -0.75
SNCAIP-203ENST00000379538 A4D1N5 150 aa10.37□□□□□ -0.75
SNCAIP-203ENST00000379538 RBAKDNA6NC62 111 aa10.37□□□□□ -0.75
SNCAIP-203ENST00000379538 WNK1Q9H4A3 2382 aa10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 A0A087WWL8 130 aa10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 RNASE4P34096 147 aaKnown RBP10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 GPHB5Q86YW7 130 aa10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 TEX49A0A1B0GTD5 131 aa10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 GAGE5Q13069 117 aa10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 GAGE6Q13070 117 aa10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 NTN5Q8WTR8 489 aaPredicted RBP10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 PRO1854Q9UHT4 67 aa10.36□□□□□ -0.75
SNCAIP-203ENST00000379538 ADARB2-AS1A8MUL3 147 aa10.35□□□□□ -0.75
SNCAIP-203ENST00000379538 CITED1Q99966 193 aa10.35□□□□□ -0.75
SNCAIP-203ENST00000379538 DPH3P1Q9H4G8 78 aa10.35□□□□□ -0.75
SNCAIP-203ENST00000379538 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
SNCAIP-203ENST00000379538 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
SNCAIP-203ENST00000379538 ZFAND2AQ8N6M9 145 aa10.35□□□□□ -0.75
SNCAIP-203ENST00000379538 C3orf56Q8N813 242 aa10.35□□□□□ -0.75
SNCAIP-203ENST00000379538 NSD1Q96L73 2696 aaPredicted RBP10.34□□□□□ -0.75
SNCAIP-203ENST00000379538 SBSPONQ8IVN8 264 aa10.34□□□□□ -0.75
SNCAIP-203ENST00000379538 AMELXQ99217 191 aa10.34□□□□□ -0.75
SNCAIP-203ENST00000379538 F8P00451 2351 aa10.34□□□□□ -0.75
SNCAIP-203ENST00000379538 SLC25A29Q8N8R3 303 aa10.34□□□□□ -0.75
SNCAIP-203ENST00000379538 MOB4Q9Y3A3 225 aa10.33□□□□□ -0.76
SNCAIP-203ENST00000379538 IGIPA6NJ69 53 aa10.33□□□□□ -0.76
SNCAIP-203ENST00000379538 SRD5A1P18405 259 aa10.33□□□□□ -0.76
SNCAIP-203ENST00000379538 RPL11P62913 178 aaKnown RBP10.33□□□□□ -0.76
SNCAIP-203ENST00000379538 KRTAP1-1Q07627 177 aa10.33□□□□□ -0.76
SNCAIP-203ENST00000379538 SHISA2Q6UWI4 295 aa10.33□□□□□ -0.76
SNCAIP-203ENST00000379538 Q8N1Y9 231 aa10.33□□□□□ -0.76
SNCAIP-203ENST00000379538 METTL26Q96S19 204 aa10.33□□□□□ -0.76
SNCAIP-203ENST00000379538 A6NDX4 124 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 F5H697 171 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 TRBV12-3P01733 135 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 RNASE3P12724 160 aaKnown RBP10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 UNQ9165/PRO28630Q6UXU0 137 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 Q6ZSV7 163 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 ZNF256Q9Y2P7 627 aaPredicted RBP10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 J3QQQ9 107 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 ASIPP42127 132 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 NDUFV3P56181 108 aaKnown RBP10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 Q1RN00 199 aa10.32□□□□□ -0.76
SNCAIP-203ENST00000379538 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 FAM74A4Q5TZK3 123 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 MUSTN1Q8IVN3 82 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 SMIM20Q8N5G0 67 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 SCGB2A1O75556 95 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 SNCGO76070 127 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 IGHV3-33P01772 117 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 PMVKQ15126 192 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 VCX2Q9H322 139 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 YAE1D1Q9NRH1 226 aa10.31□□□□□ -0.76
SNCAIP-203ENST00000379538 RHODO00212 210 aa10.3□□□□□ -0.76
SNCAIP-203ENST00000379538 LINC00315P59091 139 aa10.3□□□□□ -0.76
SNCAIP-203ENST00000379538 NPC2P61916 151 aa10.3□□□□□ -0.76
SNCAIP-203ENST00000379538 LYRM7Q5U5X0 104 aa10.3□□□□□ -0.76
SNCAIP-203ENST00000379538 HERVK_113P61574 105 aa10.29□□□□□ -0.76
SNCAIP-203ENST00000379538 FAM159AQ6UWV7 190 aa10.29□□□□□ -0.76
SNCAIP-203ENST00000379538 FSHBP01225 129 aa10.29□□□□□ -0.76
SNCAIP-203ENST00000379538 LGALS3P17931 250 aaKnown RBP10.29□□□□□ -0.76
SNCAIP-203ENST00000379538 HERV-K104P63124 156 aa10.29□□□□□ -0.76
SNCAIP-203ENST00000379538 TTC32Q5I0X7 151 aa10.29□□□□□ -0.76
SNCAIP-203ENST00000379538 SUMO4Q6EEV6 95 aa10.29□□□□□ -0.76
SNCAIP-203ENST00000379538 FAM110DQ8TAY7 271 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms