RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 UBE2D4Q9Y2X8 147 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 SPTBN1Q01082 2364 aaKnown RBP4.89□□□□□ -1.63
NFX1-202ENST00000379521 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 A0A0J9YY99 117 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 SDHAF1A6NFY7 115 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 IGHV3-30P01768 117 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 IGHV3-30-5P0DP03 117 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 PHLDA3Q9Y5J5 127 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 A0A1W2PPM0 123 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 A8MWV9 139 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 FXYD2P54710 66 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 Q6ZVH6 145 aa4.89□□□□□ -1.63
NFX1-202ENST00000379521 HSBP1L1C9JCN9 74 aa4.88□□□□□ -1.63
NFX1-202ENST00000379521 TIMM17BO60830 172 aa4.88□□□□□ -1.63
NFX1-202ENST00000379521 ZC2HC1BQ5TFG8 222 aa4.88□□□□□ -1.63
NFX1-202ENST00000379521 FAM159AQ6UWV7 190 aa4.88□□□□□ -1.63
NFX1-202ENST00000379521 CHTOPQ9Y3Y2 248 aaKnown RBP4.88□□□□□ -1.63
NFX1-202ENST00000379521 DOPEY2Q9Y3R5 2298 aa4.88□□□□□ -1.63
NFX1-202ENST00000379521 SETXQ7Z333 2677 aaKnown RBP4.88□□□□□ -1.63
NFX1-202ENST00000379521 I3L3M4 83 aa4.88□□□□□ -1.63
NFX1-202ENST00000379521 SMIM15Q7Z3B0 74 aa4.88□□□□□ -1.63
NFX1-202ENST00000379521 WFDC11Q8NEX6 87 aa4.88□□□□□ -1.63
NFX1-202ENST00000379521 TINCRA0A1B0GVN0 87 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 TIRAPP58753 221 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 LINC01006Q8NI28 216 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 TRAV12-3A0A0B4J271 114 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 CMC4P56277 68 aaPredicted RBP4.87□□□□□ -1.63
NFX1-202ENST00000379521 NCOR2Q9Y618 2525 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 H7C423 109 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 LEPROTO15243 131 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 ZNF22P17026 224 aaPredicted RBP4.87□□□□□ -1.63
NFX1-202ENST00000379521 SPANXDQ9BXN6 97 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 SPANXCQ9NY87 97 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 CYSLTR1Q9Y271 337 aa4.87□□□□□ -1.63
NFX1-202ENST00000379521 TRBV10-1A0A0K0K1A3 114 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 OR11H1Q8NG94 326 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 TPPP3Q9BW30 176 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 SPANXA1Q9NS26 97 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 DNAH7Q8WXX0 4024 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 A0A0J9YXY3 114 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 F5H768 121 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 ZNF688P0C7X2 276 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 CD300EQ496F6 205 aaPredicted RBP4.86□□□□□ -1.63
NFX1-202ENST00000379521 SCGB3A1Q96QR1 104 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 CENPEQ02224 2701 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 IGLL5B9A064 214 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 RHODO00212 210 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 SHISA2Q6UWI4 295 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 Q9UF83 564 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 TP53TG1Q9Y2A0 90 aa4.86□□□□□ -1.63
NFX1-202ENST00000379521 TSSC4Q9Y5U2 329 aaPredicted RBP4.86□□□□□ -1.63
NFX1-202ENST00000379521 USP9YO00507 2555 aaPredicted RBP4.86□□□□□ -1.63
NFX1-202ENST00000379521 LOC107984156A0A0G2JMH3 177 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 A6NDN8 102 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 ARL17AQ8IVW1 177 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 SPINK13Q1W4C9 94 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 GTSCR1Q86UQ5 136 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 ABCA1O95477 2261 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 LYSTQ99698 3801 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 C12orf74Q32Q52 190 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 NTM-AS1Q6ZSK4 140 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 PLEKHB2Q96CS7 222 aa4.85□□□□□ -1.63
NFX1-202ENST00000379521 TRAV12-2A0A075B6T6 113 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 TRAV4A0A0B4J268 109 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 G3V4G9 280 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 CD28P10747 220 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 RPL39P62891 51 aaKnown RBP4.84□□□□□ -1.63
NFX1-202ENST00000379521 PRADC1Q9BSG0 188 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 TTTY13Q9BZ97 58 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 AGRNO00468 2067 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 A0A0B4J2C4 111 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.84□□□□□ -1.63
NFX1-202ENST00000379521 LINC00482Q8N8I6 264 aa4.84□□□□□ -1.63
NFX1-202ENST00000379521 TMEM263Q8WUH6 116 aaKnown RBP4.84□□□□□ -1.63
NFX1-202ENST00000379521 MED13LQ71F56 2210 aa4.84□□□□□ -1.64
NFX1-202ENST00000379521 SRD5A1P18405 259 aa4.84□□□□□ -1.64
NFX1-202ENST00000379521 NMUP48645 174 aa4.84□□□□□ -1.64
NFX1-202ENST00000379521 ZNF415Q09FC8 603 aa4.84□□□□□ -1.64
NFX1-202ENST00000379521 RRN3P1Q2M238 152 aa4.84□□□□□ -1.64
NFX1-202ENST00000379521 AMMECR1LQ6DCA0 310 aa4.84□□□□□ -1.64
NFX1-202ENST00000379521 C10orf126Q8N4M7 172 aa4.84□□□□□ -1.64
NFX1-202ENST00000379521 KIR2DL5BQ8NHK3 375 aa4.84□□□□□ -1.64
NFX1-202ENST00000379521 MAP1BP46821 2468 aaKnown RBP4.84□□□□□ -1.64
NFX1-202ENST00000379521 PRKDCP78527 4128 aaKnown RBP4.83□□□□□ -1.64
NFX1-202ENST00000379521 AZU1P20160 251 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 NDUFA11Q86Y39 141 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 LINC01561Q8N1V8 128 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 NIPBLQ6KC79 2804 aaeCLIP4.83□□□□□ -1.64
NFX1-202ENST00000379521 LOC100131303A0A0U1RQF7 123 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 KNCNA6PVL3 124 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 CCL24O00175 119 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 SMCPP49901 116 aaPredicted RBP4.83□□□□□ -1.64
NFX1-202ENST00000379521 MAPK1IP1LQ8NDC0 245 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 ATP6V0E2Q8NHE4 81 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 HUWE1Q7Z6Z7 4374 aaKnown RBP4.83□□□□□ -1.64
NFX1-202ENST00000379521 DEFB136Q30KP8 78 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 ZFAND6Q6FIF0 208 aa4.83□□□□□ -1.64
NFX1-202ENST00000379521 ZNF625Q96I27 306 aaPredicted RBP4.83□□□□□ -1.64
NFX1-202ENST00000379521 INSP01308 110 aa4.82□□□□□ -1.64
NFX1-202ENST00000379521 DEFB131AP59861 70 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms