RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 NTF3P20783 257 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 KRTAP10-1P60331 282 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 CACNG7P62955 275 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 WFDC2Q14508 124 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 LAGE3Q14657 143 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 TOR2AQ5JU69 321 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 NTM-AS1Q6ZSK4 140 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 MAPKAPK5-AS1Q8N8E1 139 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 BIN3Q9NQY0 253 aa10.23□□□□□ -0.77
RAB4B-202ENST00000378307 TRBV6-8A0A0A6YYG3 113 aa10.22□□□□□ -0.77
RAB4B-202ENST00000378307 M0QY20 66 aa10.22□□□□□ -0.77
RAB4B-202ENST00000378307 RPP21Q9H633 154 aaKnown RBP10.22□□□□□ -0.77
RAB4B-202ENST00000378307 XKRY2A2RUG3 117 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 F2Z2F3 143 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 MGPP08493 103 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 CTRLP40313 264 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 CEBPGP53567 150 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 SUMO4Q6EEV6 95 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 GTSF1Q8WW33 167 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 FAM210AQ96ND0 272 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 KLK12Q9UKR0 248 aa10.21□□□□□ -0.77
RAB4B-202ENST00000378307 CDPF1Q6NVV7 123 aa10.2□□□□□ -0.78
RAB4B-202ENST00000378307 EIF5A2Q9GZV4 153 aaKnown RBP10.2□□□□□ -0.78
RAB4B-202ENST00000378307 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
RAB4B-202ENST00000378307 SRP19P09132 144 aaKnown RBP10.19□□□□□ -0.78
RAB4B-202ENST00000378307 XGP55808 180 aa10.19□□□□□ -0.78
RAB4B-202ENST00000378307 Q8N814 137 aa10.19□□□□□ -0.78
RAB4B-202ENST00000378307 CNFNQ9BYD5 112 aa10.19□□□□□ -0.78
RAB4B-202ENST00000378307 URGCP-MRPS24S4R325 110 aa10.19□□□□□ -0.78
RAB4B-202ENST00000378307 A0A087WX48 190 aa10.18□□□□□ -0.78
RAB4B-202ENST00000378307 TMEM262E9PQX1 116 aa10.18□□□□□ -0.78
RAB4B-202ENST00000378307 LECT2O14960 151 aa10.18□□□□□ -0.78
RAB4B-202ENST00000378307 FOXA3P55318 350 aaPredicted RBP10.18□□□□□ -0.78
RAB4B-202ENST00000378307 MPV17L2Q567V2 206 aa10.18□□□□□ -0.78
RAB4B-202ENST00000378307 WDR73Q6P4I2 378 aa10.18□□□□□ -0.78
RAB4B-202ENST00000378307 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
RAB4B-202ENST00000378307 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
RAB4B-202ENST00000378307 GATCO43716 136 aaKnown RBP10.17□□□□□ -0.78
RAB4B-202ENST00000378307 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
RAB4B-202ENST00000378307 TWIST1Q15672 202 aa10.17□□□□□ -0.78
RAB4B-202ENST00000378307 FAM231DQ6ZW35 169 aa10.17□□□□□ -0.78
RAB4B-202ENST00000378307 UBE2WQ96B02 151 aa10.17□□□□□ -0.78
RAB4B-202ENST00000378307 CHCHD7Q9BUK0 85 aa10.17□□□□□ -0.78
RAB4B-202ENST00000378307 DPH3P1Q9H4G8 78 aa10.17□□□□□ -0.78
RAB4B-202ENST00000378307 C9JQL5 133 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 GCSHP23434 173 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 ATRAIDQ6UW56 229 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 ENHOQ6UWT2 76 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 LINC01551Q86U37 167 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 Q8N976 141 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 SMIM7Q9BQ49 75 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 CHCHD5Q9BSY4 110 aa10.16□□□□□ -0.78
RAB4B-202ENST00000378307 IGKV2D-24A0A075B6R9 120 aa10.15□□□□□ -0.78
RAB4B-202ENST00000378307 IGLV5-52A0A0A0MRZ9 124 aa10.15□□□□□ -0.78
RAB4B-202ENST00000378307 TRAV26-2A0A0B4J265 109 aa10.15□□□□□ -0.78
RAB4B-202ENST00000378307 NDUFS6O75380 124 aaKnown RBP10.15□□□□□ -0.78
RAB4B-202ENST00000378307 SRSF3P84103 164 aaKnown RBP10.15□□□□□ -0.78
RAB4B-202ENST00000378307 RASL11AQ6T310 242 aa10.15□□□□□ -0.78
RAB4B-202ENST00000378307 Q8N1X5 172 aa10.15□□□□□ -0.78
RAB4B-202ENST00000378307 PGLYRP4Q96LB8 373 aa10.15□□□□□ -0.78
RAB4B-202ENST00000378307 H7C1H1 209 aa10.14□□□□□ -0.79
RAB4B-202ENST00000378307 GAGE6Q13070 117 aa10.14□□□□□ -0.79
RAB4B-202ENST00000378307 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
RAB4B-202ENST00000378307 C15orf54Q8N8G6 183 aa10.14□□□□□ -0.79
RAB4B-202ENST00000378307 GATD1Q8NB37 220 aa10.14□□□□□ -0.79
RAB4B-202ENST00000378307 NIT2Q9NQR4 276 aa10.14□□□□□ -0.79
RAB4B-202ENST00000378307 ZNF727A8MUV8 499 aa10.13□□□□□ -0.79
RAB4B-202ENST00000378307 HAMPP81172 84 aa10.13□□□□□ -0.79
RAB4B-202ENST00000378307 ELOBQ15370 118 aa10.13□□□□□ -0.79
RAB4B-202ENST00000378307 IQCJQ1A5X6 159 aa10.13□□□□□ -0.79
RAB4B-202ENST00000378307 KCNIP4Q6PIL6 250 aa10.13□□□□□ -0.79
RAB4B-202ENST00000378307 NTN5Q8WTR8 489 aaPredicted RBP10.13□□□□□ -0.79
RAB4B-202ENST00000378307 TRBV25-1A0A075B6N4 114 aa10.12□□□□□ -0.79
RAB4B-202ENST00000378307 A8MWL6 223 aa10.12□□□□□ -0.79
RAB4B-202ENST00000378307 ANGP03950 147 aaKnown RBP10.12□□□□□ -0.79
RAB4B-202ENST00000378307 RBX1P62877 108 aa10.12□□□□□ -0.79
RAB4B-202ENST00000378307 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
RAB4B-202ENST00000378307 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.12□□□□□ -0.79
RAB4B-202ENST00000378307 RPL39LQ96EH5 51 aaKnown RBP10.12□□□□□ -0.79
RAB4B-202ENST00000378307 FAM30AQ9NZY2 134 aa10.12□□□□□ -0.79
RAB4B-202ENST00000378307 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
RAB4B-202ENST00000378307 IGHV1-24A0A0C4DH33 117 aa10.11□□□□□ -0.79
RAB4B-202ENST00000378307 CT83Q5H943 113 aa10.11□□□□□ -0.79
RAB4B-202ENST00000378307 RMI2Q96E14 147 aa10.11□□□□□ -0.79
RAB4B-202ENST00000378307 COX11Q9Y6N1 276 aa10.11□□□□□ -0.79
RAB4B-202ENST00000378307 GAS8-AS1O95177 125 aa10.1□□□□□ -0.79
RAB4B-202ENST00000378307 Q0VG73 95 aa10.1□□□□□ -0.79
RAB4B-202ENST00000378307 CLPSL2Q6UWE3 100 aa10.1□□□□□ -0.79
RAB4B-202ENST00000378307 OSTCQ9NRP0 149 aa10.1□□□□□ -0.79
RAB4B-202ENST00000378307 V9GYV3 84 aa10.1□□□□□ -0.79
RAB4B-202ENST00000378307 VPS13BQ7Z7G8 4022 aa10.09□□□□□ -0.79
RAB4B-202ENST00000378307 HIGD1CA8MV81 97 aa10.09□□□□□ -0.79
RAB4B-202ENST00000378307 RPL23P62829 140 aaKnown RBP10.09□□□□□ -0.79
RAB4B-202ENST00000378307 LINC01620Q4KN68 170 aa10.09□□□□□ -0.79
RAB4B-202ENST00000378307 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
RAB4B-202ENST00000378307 LINC00269Q8N2A0 174 aa10.09□□□□□ -0.79
RAB4B-202ENST00000378307 C20orf203Q8NBC4 194 aa10.09□□□□□ -0.79
RAB4B-202ENST00000378307 TSKUQ8WUA8 353 aa10.09□□□□□ -0.79
RAB4B-202ENST00000378307 ISOC2Q96AB3 205 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms