RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 RYR3Q15413 4870 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 IGLV2-18A0A075B6J9 118 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 A0A087WWC5 75 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 NBDYA0A0U1RRE5 68 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 M0QY20 66 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 UBE2D3P61077 147 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 UBE2D2P62837 147 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 TTC32Q5I0X7 151 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 LELP1Q5T871 98 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 SUMO4Q6EEV6 95 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 FRZBQ92765 325 aa9.08□□□□□ -0.96
CKAP2-202ENST00000378034 TRAV8-6A0A0B4J262 113 aa9.07□□□□□ -0.96
CKAP2-202ENST00000378034 A0A1B0GW15 77 aa9.07□□□□□ -0.96
CKAP2-202ENST00000378034 C10orf91Q5T1B1 145 aa9.07□□□□□ -0.96
CKAP2-202ENST00000378034 RASL11AQ6T310 242 aa9.07□□□□□ -0.96
CKAP2-202ENST00000378034 ATRAIDQ6UW56 229 aa9.07□□□□□ -0.96
CKAP2-202ENST00000378034 TMEM191AQ9H0A3 160 aa9.07□□□□□ -0.96
CKAP2-202ENST00000378034 K7EP13 123 aa9.06□□□□□ -0.96
CKAP2-202ENST00000378034 CARHSP1Q9Y2V2 147 aaKnown RBP9.06□□□□□ -0.96
CKAP2-202ENST00000378034 M0R2N4 97 aa9.06□□□□□ -0.96
CKAP2-202ENST00000378034 SVBPQ8N300 66 aa9.06□□□□□ -0.96
CKAP2-202ENST00000378034 TNFRSF18Q9Y5U5 241 aa9.06□□□□□ -0.96
CKAP2-202ENST00000378034 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
CKAP2-202ENST00000378034 S100A8P05109 93 aa9.05□□□□□ -0.96
CKAP2-202ENST00000378034 OR10J3Q5JRS4 329 aa9.05□□□□□ -0.96
CKAP2-202ENST00000378034 DAZ4Q86SG3 579 aaKnown RBP9.05□□□□□ -0.96
CKAP2-202ENST00000378034 NIT2Q9NQR4 276 aa9.05□□□□□ -0.96
CKAP2-202ENST00000378034 DAZ3Q9NR90 486 aaKnown RBP9.05□□□□□ -0.96
CKAP2-202ENST00000378034 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
CKAP2-202ENST00000378034 TRAV9-2A0A087WT02 112 aa9.04□□□□□ -0.96
CKAP2-202ENST00000378034 DNAH10OSP0CZ25 163 aa9.04□□□□□ -0.96
CKAP2-202ENST00000378034 BTF3P20290 206 aaKnown RBP9.04□□□□□ -0.96
CKAP2-202ENST00000378034 TMEM97Q5BJF2 176 aa9.04□□□□□ -0.96
CKAP2-202ENST00000378034 CTDSP1Q9GZU7 261 aa9.04□□□□□ -0.96
CKAP2-202ENST00000378034 DNAH6Q9C0G6 4158 aa9.04□□□□□ -0.96
CKAP2-202ENST00000378034 WFDC10BQ8IUB3 73 aa9.04□□□□□ -0.96
CKAP2-202ENST00000378034 GATD1Q8NB37 220 aa9.04□□□□□ -0.96
CKAP2-202ENST00000378034 IGHV3-38A0A0C4DH36 116 aa9.03□□□□□ -0.96
CKAP2-202ENST00000378034 ATP5L2Q7Z4Y8 100 aa9.03□□□□□ -0.96
CKAP2-202ENST00000378034 IMMP2LQ96T52 175 aa9.03□□□□□ -0.96
CKAP2-202ENST00000378034 MRAP2Q96G30 205 aa9.03□□□□□ -0.96
CKAP2-202ENST00000378034 RAB4AP20338 218 aa9.02□□□□□ -0.97
CKAP2-202ENST00000378034 HBBP68871 147 aa9.02□□□□□ -0.97
CKAP2-202ENST00000378034 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.97
CKAP2-202ENST00000378034 C1orf134Q5TEV5 83 aa9.02□□□□□ -0.97
CKAP2-202ENST00000378034 TRAV26-2A0A0B4J265 109 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 SNAPINO95295 136 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 CAMPP49913 170 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 C10orf126Q8N4M7 172 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 RNF185Q96GF1 192 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 TRBV6-8A0A0A6YYG3 113 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 MRPL54Q6P161 138 aaKnown RBP9.01□□□□□ -0.97
CKAP2-202ENST00000378034 KCNIP4Q6PIL6 250 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 AMN1Q8IY45 258 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 CLRN3Q8NCR9 226 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 TMEM242Q9NWH2 141 aa9.01□□□□□ -0.97
CKAP2-202ENST00000378034 PPP1R17O96001 155 aa9□□□□□ -0.97
CKAP2-202ENST00000378034 RHEBQ15382 184 aa9□□□□□ -0.97
CKAP2-202ENST00000378034 FAM104BQ5XKR9 115 aa9□□□□□ -0.97
CKAP2-202ENST00000378034 LINC00336Q6ZUF6 198 aa9□□□□□ -0.97
CKAP2-202ENST00000378034 C6orf223Q8N319 242 aa9□□□□□ -0.97
CKAP2-202ENST00000378034 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
CKAP2-202ENST00000378034 TRBV6-5A0A0K0K1A5 114 aa8.99□□□□□ -0.97
CKAP2-202ENST00000378034 PKIAP61925 76 aa8.99□□□□□ -0.97
CKAP2-202ENST00000378034 BTF3L4Q96K17 158 aa8.99□□□□□ -0.97
CKAP2-202ENST00000378034 CHCHD7Q9BUK0 85 aa8.99□□□□□ -0.97
CKAP2-202ENST00000378034 TRAV9-1A0A075B6T8 112 aa8.98□□□□□ -0.97
CKAP2-202ENST00000378034 C7orf77A4D0Y5 90 aa8.98□□□□□ -0.97
CKAP2-202ENST00000378034 RPL39LQ96EH5 51 aaKnown RBP8.98□□□□□ -0.97
CKAP2-202ENST00000378034 TRBV25-1A0A075B6N4 114 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 RTL8CO15255 209 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 IQCJQ1A5X6 159 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 MRPL51Q4U2R6 128 aaKnown RBP8.97□□□□□ -0.97
CKAP2-202ENST00000378034 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 NIT1Q86X76 327 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 URGCP-MRPS24S4R325 110 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 IGHV1-24A0A0C4DH33 117 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 S100PP25815 95 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 COTL1Q14019 142 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 NFE4Q86UQ8 179 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 ST20Q9HBF5 79 aa8.97□□□□□ -0.97
CKAP2-202ENST00000378034 SDHAF1A6NFY7 115 aa8.96□□□□□ -0.98
CKAP2-202ENST00000378034 NCR2O95944 276 aa8.96□□□□□ -0.98
CKAP2-202ENST00000378034 A0A087WX48 190 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 IBA57-AS1B1ANH7 110 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 IGHV3-30P01768 117 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 IGHV3-33P01772 117 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 PPBPP02775 128 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 IGHV3-30-3P0DP02 117 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 IGHV3-30-5P0DP03 117 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 LAGE3Q14657 143 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 CHCHD5Q9BSY4 110 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 RPS10P5Q9NQ39 176 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 I3L3M4 83 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 GAS8-AS1O95177 125 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 CKS2P33552 79 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
CKAP2-202ENST00000378034 ELOBQ15370 118 aa8.95□□□□□ -0.98
CKAP2-202ENST00000378034 CBLN2Q8IUK8 224 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms