RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 C20orf203Q8NBC4 194 aa15.68■□□□□ 0.1
UPF3A-202ENST00000375299 A0A0J9YX75 114 aa15.68■□□□□ 0.1
UPF3A-202ENST00000375299 C19orf84I3L1E1 186 aa15.67■□□□□ 0.1
UPF3A-202ENST00000375299 CITED1Q99966 193 aa15.67■□□□□ 0.1
UPF3A-202ENST00000375299 M0R2P5 195 aa15.67■□□□□ 0.1
UPF3A-202ENST00000375299 TEX29Q8N6K0 151 aa15.67■□□□□ 0.1
UPF3A-202ENST00000375299 ANAPC13Q9BS18 74 aa15.67■□□□□ 0.1
UPF3A-202ENST00000375299 ATXN8Q156A1 80 aa15.66■□□□□ 0.1
UPF3A-202ENST00000375299 Q1RN00 199 aa15.66■□□□□ 0.1
UPF3A-202ENST00000375299 ODF3Q96PU9 254 aa15.66■□□□□ 0.1
UPF3A-202ENST00000375299 A0A0J9YXV3 536 aa15.65■□□□□ 0.1
UPF3A-202ENST00000375299 K7EMT4 169 aa15.65■□□□□ 0.1
UPF3A-202ENST00000375299 IGLV4-3A0A075B6K6 122 aa15.65■□□□□ 0.1
UPF3A-202ENST00000375299 SVIPQ8NHG7 77 aa15.65■□□□□ 0.1
UPF3A-202ENST00000375299 SPTBN4Q9H254 2564 aa15.65■□□□□ 0.1
UPF3A-202ENST00000375299 AKAP6Q13023 2319 aa15.65■□□□□ 0.1
UPF3A-202ENST00000375299 A0A0J9YXY3 114 aa15.64■□□□□ 0.09
UPF3A-202ENST00000375299 I3L3M4 83 aa15.64■□□□□ 0.09
UPF3A-202ENST00000375299 IGLV1-40P01703 118 aa15.64■□□□□ 0.09
UPF3A-202ENST00000375299 TRAV12-2A0A075B6T6 113 aa15.64■□□□□ 0.09
UPF3A-202ENST00000375299 A6NDX4 124 aa15.64■□□□□ 0.09
UPF3A-202ENST00000375299 H3BUX3 64 aa15.64■□□□□ 0.09
UPF3A-202ENST00000375299 LINC01620Q4KN68 170 aa15.64■□□□□ 0.09
UPF3A-202ENST00000375299 Q8N1Y9 231 aa15.64■□□□□ 0.09
UPF3A-202ENST00000375299 NTN5Q8WTR8 489 aaPredicted RBP15.64■□□□□ 0.09
UPF3A-202ENST00000375299 ELANEP08246 267 aa15.63■□□□□ 0.09
UPF3A-202ENST00000375299 BLCAPP62952 87 aa15.63■□□□□ 0.09
UPF3A-202ENST00000375299 ZNF580Q9UK33 172 aa15.63■□□□□ 0.09
UPF3A-202ENST00000375299 ITPR1Q14643 2758 aa15.63■□□□□ 0.09
UPF3A-202ENST00000375299 IGHV4-39P01824 125 aa15.63■□□□□ 0.09
UPF3A-202ENST00000375299 LINC01600Q96MT4 127 aa15.63■□□□□ 0.09
UPF3A-202ENST00000375299 ABCA2Q9BZC7 2435 aa15.62■□□□□ 0.09
UPF3A-202ENST00000375299 IGHV1OR15-1A0A075B7D0 117 aa15.62■□□□□ 0.09
UPF3A-202ENST00000375299 GATA3P23771 443 aa15.62■□□□□ 0.09
UPF3A-202ENST00000375299 IGKV3-20P01619 116 aa15.61■□□□□ 0.09
UPF3A-202ENST00000375299 IGHV4-38-2P0DP08 117 aa15.61■□□□□ 0.09
UPF3A-202ENST00000375299 CELSR1Q9NYQ6 3014 aa15.61■□□□□ 0.09
UPF3A-202ENST00000375299 TRBV30A0A0K0K1B3 111 aa15.61■□□□□ 0.09
UPF3A-202ENST00000375299 CHD8Q9HCK8 2581 aa15.6■□□□□ 0.09
UPF3A-202ENST00000375299 IGHV3-30-3P0DP02 117 aa15.6■□□□□ 0.09
UPF3A-202ENST00000375299 NCOR2Q9Y618 2525 aa15.6■□□□□ 0.09
UPF3A-202ENST00000375299 TRBV10-2A0A0K0K1G8 114 aa15.59■□□□□ 0.09
UPF3A-202ENST00000375299 LITAFQ99732 161 aa15.59■□□□□ 0.09
UPF3A-202ENST00000375299 TRIAP1O43715 76 aa15.58■□□□□ 0.09
UPF3A-202ENST00000375299 SNCGO76070 127 aa15.58■□□□□ 0.09
UPF3A-202ENST00000375299 GNLYP22749 145 aa15.58■□□□□ 0.09
UPF3A-202ENST00000375299 RPL13AP40429 203 aaKnown RBP15.58■□□□□ 0.09
UPF3A-202ENST00000375299 CFHR3Q02985 330 aa15.58■□□□□ 0.09
UPF3A-202ENST00000375299 TIMM21Q9BVV7 248 aa15.58■□□□□ 0.09
UPF3A-202ENST00000375299 BEX4Q9NWD9 120 aaPredicted RBP15.58■□□□□ 0.09
UPF3A-202ENST00000375299 SPXQ9BT56 116 aa15.58■□□□□ 0.08
UPF3A-202ENST00000375299 GAGE2BQ13066 116 aa15.57■□□□□ 0.08
UPF3A-202ENST00000375299 SPINK13Q1W4C9 94 aa15.57■□□□□ 0.08
UPF3A-202ENST00000375299 GAGE2EQ4V326 116 aa15.57■□□□□ 0.08
UPF3A-202ENST00000375299 PRORYQ9H606 182 aa15.57■□□□□ 0.08
UPF3A-202ENST00000375299 GAGE2DQ9UEU5 116 aa15.57■□□□□ 0.08
UPF3A-202ENST00000375299 ADARB2-AS1A8MUL3 147 aa15.56■□□□□ 0.08
UPF3A-202ENST00000375299 CD28P10747 220 aa15.56■□□□□ 0.08
UPF3A-202ENST00000375299 PYGO1Q9Y3Y4 419 aa15.56■□□□□ 0.08
UPF3A-202ENST00000375299 IGHV4-61A0A0C4DH41 118 aa15.56■□□□□ 0.08
UPF3A-202ENST00000375299 SNRPD3P62318 126 aaKnown RBP15.56■□□□□ 0.08
UPF3A-202ENST00000375299 MRPS36P82909 103 aaKnown RBP15.56■□□□□ 0.08
UPF3A-202ENST00000375299 TRAV8-4A0A0B4J246 113 aa15.55■□□□□ 0.08
UPF3A-202ENST00000375299 TRAV4A0A0B4J268 109 aa15.55■□□□□ 0.08
UPF3A-202ENST00000375299 NHLRC4P0CG21 123 aaPredicted RBP15.55■□□□□ 0.08
UPF3A-202ENST00000375299 GAGE5Q13069 117 aa15.55■□□□□ 0.08
UPF3A-202ENST00000375299 GAGE6Q13070 117 aa15.55■□□□□ 0.08
UPF3A-202ENST00000375299 TEX49A0A1B0GTD5 131 aa15.55■□□□□ 0.08
UPF3A-202ENST00000375299 FAM104AQ969W3 186 aa15.55■□□□□ 0.08
UPF3A-202ENST00000375299 SPANXDQ9BXN6 97 aa15.55■□□□□ 0.08
UPF3A-202ENST00000375299 SPANXCQ9NY87 97 aa15.55■□□□□ 0.08
UPF3A-202ENST00000375299 VPS13CQ709C8 3753 aa15.54■□□□□ 0.08
UPF3A-202ENST00000375299 H3BMM0 161 aa15.54■□□□□ 0.08
UPF3A-202ENST00000375299 CRLF1O75462 422 aa15.54■□□□□ 0.08
UPF3A-202ENST00000375299 UBE2WQ96B02 151 aa15.54■□□□□ 0.08
UPF3A-202ENST00000375299 TRAV8-3A0A0A6YYJ7 113 aa15.54■□□□□ 0.08
UPF3A-202ENST00000375299 K7EQG2 157 aa15.54■□□□□ 0.08
UPF3A-202ENST00000375299 ICOSQ9Y6W8 199 aa15.54■□□□□ 0.08
UPF3A-202ENST00000375299 TRGV11A0A075B6L2 103 aa15.53■□□□□ 0.08
UPF3A-202ENST00000375299 IGHV1-58A0A0C4DH39 117 aa15.53■□□□□ 0.08
UPF3A-202ENST00000375299 PIMREGQ9BSJ6 248 aa15.53■□□□□ 0.08
UPF3A-202ENST00000375299 PRSS2P07478 247 aa15.53■□□□□ 0.08
UPF3A-202ENST00000375299 PRRC2AP48634 2157 aaKnown RBP15.52■□□□□ 0.08
UPF3A-202ENST00000375299 NDUFV3P56181 108 aaKnown RBP15.52■□□□□ 0.08
UPF3A-202ENST00000375299 Q6Q795 121 aa15.52■□□□□ 0.08
UPF3A-202ENST00000375299 EDA2RQ9HAV5 297 aa15.52■□□□□ 0.08
UPF3A-202ENST00000375299 ADAMTSL4-AS1Q5T5F5 129 aa15.51■□□□□ 0.07
UPF3A-202ENST00000375299 TMEM95Q3KNT9 176 aa15.51■□□□□ 0.07
UPF3A-202ENST00000375299 C2orf82Q6UX34 121 aa15.51■□□□□ 0.07
UPF3A-202ENST00000375299 NDUFA12Q9UI09 145 aa15.51■□□□□ 0.07
UPF3A-202ENST00000375299 MIAQ16674 131 aa15.5■□□□□ 0.07
UPF3A-202ENST00000375299 SS18L2Q9UHA2 77 aa15.5■□□□□ 0.07
UPF3A-202ENST00000375299 C10orf105Q8TEF2 133 aa15.5■□□□□ 0.07
UPF3A-202ENST00000375299 PSMB8P28062 276 aa15.49■□□□□ 0.07
UPF3A-202ENST00000375299 CEMP1Q6PRD7 247 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-202ENST00000375299 H3BT86 120 aa15.49■□□□□ 0.07
UPF3A-202ENST00000375299 H7C423 109 aa15.49■□□□□ 0.07
UPF3A-202ENST00000375299 COX6CP09669 75 aa15.48■□□□□ 0.07
UPF3A-202ENST00000375299 RNASE13Q5GAN3 156 aaKnown RBP15.48■□□□□ 0.07
UPF3A-202ENST00000375299 C15orf53Q8NAA6 179 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms