RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 JMJD7-PLA2G4BH0Y9G9 81 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 LENEPQ9Y5L5 61 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 TNRC6BQ9UPQ9 1833 aaKnown RBP10.98□□□□□ -0.65
TRAF1-201ENST00000373887 I3L2K1 104 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 B9D2Q9BPU9 175 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 KIR2DL5BA0A0G2JN68 375 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 KIR2DL5BA0A0G2JPC4 375 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 K7EIM0 57 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 KIR2DL5AQ8N109 375 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 TRBV10-2A0A0K0K1G8 114 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 H3BQ85 93 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 KRTAP27-1Q3LI81 207 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 UPK3BQ9BT76 320 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 TRAV26-1A0A087WT03 109 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 PTH2Q96A98 100 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 TOMM6Q96B49 74 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 SMAD5-AS1Q9Y6J3 95 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 IGLV11-55A0A075B6I3 123 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 CTSGP08311 255 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 RNF152Q8N8N0 203 aa10.97□□□□□ -0.65
TRAF1-201ENST00000373887 NFE4Q86UQ8 179 aa10.96□□□□□ -0.65
TRAF1-201ENST00000373887 LYPD6Q86Y78 171 aa10.96□□□□□ -0.65
TRAF1-201ENST00000373887 C4orf3Q8WVX3 66 aa10.96□□□□□ -0.65
TRAF1-201ENST00000373887 SCXQ7RTU7 201 aa10.96□□□□□ -0.65
TRAF1-201ENST00000373887 SIRPDQ9H106 197 aa10.96□□□□□ -0.65
TRAF1-201ENST00000373887 TMEM256-PLSCR3K7ERE1 68 aa10.96□□□□□ -0.66
TRAF1-201ENST00000373887 COX7BP24311 80 aa10.96□□□□□ -0.66
TRAF1-201ENST00000373887 C22orf34Q6ZV56 151 aa10.96□□□□□ -0.66
TRAF1-201ENST00000373887 RNASE8Q8TDE3 154 aaKnown RBP10.96□□□□□ -0.66
TRAF1-201ENST00000373887 GTSF1Q8WW33 167 aa10.96□□□□□ -0.66
TRAF1-201ENST00000373887 TEX22C9J3V5 150 aa10.95□□□□□ -0.66
TRAF1-201ENST00000373887 IGHV4-31P0DP07 118 aa10.95□□□□□ -0.66
TRAF1-201ENST00000373887 A0A0U1RQV1 116 aa10.95□□□□□ -0.66
TRAF1-201ENST00000373887 POU2AF1Q16633 256 aa10.95□□□□□ -0.66
TRAF1-201ENST00000373887 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
TRAF1-201ENST00000373887 GPHB5Q86YW7 130 aa10.95□□□□□ -0.66
TRAF1-201ENST00000373887 HIGD2AQ9BW72 106 aa10.95□□□□□ -0.66
TRAF1-201ENST00000373887 C11orf86A6NJI1 115 aa10.94□□□□□ -0.66
TRAF1-201ENST00000373887 A0A0J9YWU9 116 aa10.94□□□□□ -0.66
TRAF1-201ENST00000373887 IL15RAQ13261 267 aa10.94□□□□□ -0.66
TRAF1-201ENST00000373887 EML6Q6ZMW3 1958 aa10.94□□□□□ -0.66
TRAF1-201ENST00000373887 E7EUB6 86 aa10.94□□□□□ -0.66
TRAF1-201ENST00000373887 MYCNOSP40205 109 aa10.94□□□□□ -0.66
TRAF1-201ENST00000373887 TAX1BP3O14907 124 aa10.93□□□□□ -0.66
TRAF1-201ENST00000373887 PATE2Q6UY27 113 aa10.93□□□□□ -0.66
TRAF1-201ENST00000373887 LINC01548A6NM66 108 aa10.93□□□□□ -0.66
TRAF1-201ENST00000373887 TMEM131Q92545 1883 aa10.93□□□□□ -0.66
TRAF1-201ENST00000373887 BPY2O14599 106 aa10.93□□□□□ -0.66
TRAF1-201ENST00000373887 UNQ9165/PRO28630Q6UXU0 137 aa10.92□□□□□ -0.66
TRAF1-201ENST00000373887 TTC28Q96AY4 2481 aa10.92□□□□□ -0.66
TRAF1-201ENST00000373887 E9PLD3 99 aa10.92□□□□□ -0.66
TRAF1-201ENST00000373887 KLK5Q9Y337 293 aaPredicted RBP10.92□□□□□ -0.66
TRAF1-201ENST00000373887 USP17L23D6RBM5 183 aa10.92□□□□□ -0.66
TRAF1-201ENST00000373887 CXCL5P42830 114 aa10.92□□□□□ -0.66
TRAF1-201ENST00000373887 C3orf22Q8N5N4 141 aa10.92□□□□□ -0.66
TRAF1-201ENST00000373887 ZNF106Q9H2Y7 1883 aaKnown RBP10.92□□□□□ -0.66
TRAF1-201ENST00000373887 SDIM1Q6ZPB5 146 aa10.91□□□□□ -0.66
TRAF1-201ENST00000373887 CREBBPQ92793 2442 aa10.91□□□□□ -0.66
TRAF1-201ENST00000373887 OTOGLQ3ZCN5 2332 aa10.91□□□□□ -0.66
TRAF1-201ENST00000373887 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
TRAF1-201ENST00000373887 OBSL1O75147 1896 aa10.91□□□□□ -0.66
TRAF1-201ENST00000373887 LY6G6DO95868 133 aa10.91□□□□□ -0.66
TRAF1-201ENST00000373887 LOXL1Q08397 574 aaPredicted RBP10.91□□□□□ -0.66
TRAF1-201ENST00000373887 WFDC10BQ8IUB3 73 aa10.91□□□□□ -0.66
TRAF1-201ENST00000373887 IGHV1-58A0A0C4DH39 117 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 IGKV1-17P01599 117 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 P0DMU3 169 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 FAM231AP0DMU4 169 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 FAM231CP0DMU5 169 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 FBXL19-AS1Q494R0 122 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 Q6ZUT4 128 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 ODF3L1Q8IXM7 274 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 A6NDX4 124 aa10.9□□□□□ -0.66
TRAF1-201ENST00000373887 MRPL55Q7Z7F7 128 aaKnown RBP10.9□□□□□ -0.66
TRAF1-201ENST00000373887 Q8NFD4 153 aa10.9□□□□□ -0.67
TRAF1-201ENST00000373887 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
TRAF1-201ENST00000373887 TCL1BO95988 128 aa10.89□□□□□ -0.67
TRAF1-201ENST00000373887 CHD3Q12873 2000 aaKnown RBP10.89□□□□□ -0.67
TRAF1-201ENST00000373887 LMO4P61968 165 aa10.89□□□□□ -0.67
TRAF1-201ENST00000373887 G3V4G9 280 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 C20orf197Q8N268 126 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 TNRC6AQ8NDV7 1962 aaKnown RBP10.88□□□□□ -0.67
TRAF1-201ENST00000373887 NACAE9PAV3 2078 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 IGLV1-47P01700 117 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 SLPIP03973 132 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 SHANK1Q9Y566 2161 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 FAM19A1Q7Z5A9 133 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 K7ERS5 55 aa10.88□□□□□ -0.67
TRAF1-201ENST00000373887 H3BT86 120 aa10.87□□□□□ -0.67
TRAF1-201ENST00000373887 LYPD6BQ8NI32 183 aa10.87□□□□□ -0.67
TRAF1-201ENST00000373887 LINC00269Q8N2A0 174 aa10.87□□□□□ -0.67
TRAF1-201ENST00000373887 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
TRAF1-201ENST00000373887 ODF1Q14990 250 aa10.86□□□□□ -0.67
TRAF1-201ENST00000373887 KIAA1549LQ6ZVL6 1849 aa10.86□□□□□ -0.67
TRAF1-201ENST00000373887 NDUFA11Q86Y39 141 aa10.86□□□□□ -0.67
TRAF1-201ENST00000373887 PLCE1Q9P212 2302 aa10.85□□□□□ -0.67
TRAF1-201ENST00000373887 A0A087WZ39 114 aa10.85□□□□□ -0.67
TRAF1-201ENST00000373887 ENHOQ6UWT2 76 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms