RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 DKK2Q9UBU2 259 aa6.39□□□□□ -1.39
SNRNP40-202ENST00000373720 APCP25054 2843 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 FBN2P35556 2912 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 TMEM238LA0A1B0GVL6 79 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 C11orf86A6NJI1 115 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 GAS8-AS1O95177 125 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 CD28P10747 220 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 ZNF25P17030 456 aaPredicted RBP6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 EDN2P20800 178 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 NMUP48645 174 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 BATFQ16520 125 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 DEFB136Q30KP8 78 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 ANKRD39Q53RE8 183 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 UFSP1Q6NVU6 142 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 Q6ZQT7 251 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 C2orf91Q6ZV80 131 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 NFE4Q86UQ8 179 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 BAALCQ8WXS3 180 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 C16orf74Q96GX8 76 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 MCRIP2Q9BUT9 160 aaKnown RBP6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 TM2D2Q9BX73 214 aa6.38□□□□□ -1.39
SNRNP40-202ENST00000373720 SMIM9A6NGZ8 99 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 PRSS29PA6NIE9 313 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 KNCNA6PVL3 124 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 H7C423 109 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 IGKV3-20P01619 116 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 PRB4P10163 310 aaPredicted RBP6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 DEFB1P60022 68 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 UBE2V1Q13404 147 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 ODF3L2Q3SX64 289 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 FAM74A4Q5TZK3 123 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 DAZ4Q86SG3 579 aaKnown RBP6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 C11orf72Q8NBR9 251 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 CITED2Q99967 270 aaPredicted RBP6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 CST9LQ9H4G1 147 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 DAZ3Q9NR90 486 aaKnown RBP6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 TP53TG1Q9Y2A0 90 aa6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 CSDC2Q9Y534 153 aaKnown RBP6.37□□□□□ -1.39
SNRNP40-202ENST00000373720 A0A087WWL8 130 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 MYMXA0A1B0GTQ4 84 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 SAP30O75446 220 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 GCSHP23434 173 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 MRPS36P82909 103 aaKnown RBP6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 PRR31Q5SQ13 230 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 CFAP126Q5VTH2 177 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 GTF2H5Q6ZYL4 71 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 IL17DQ8TAD2 202 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 VCX2Q9H322 139 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 CENPEQ02224 2701 aa6.36□□□□□ -1.39
SNRNP40-202ENST00000373720 TRBV25-1A0A075B6N4 114 aa6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 TRAV4A0A0B4J268 109 aa6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 RPL36AP83881 106 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 COTL1Q14019 142 aa6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 C18orf65Q6ZTR6 163 aa6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 Q6ZVH6 145 aa6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 RPL36ALQ969Q0 106 aaKnown RBP6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 OVOL2Q9BRP0 275 aa6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 CELSR2Q9HCU4 2923 aa6.35□□□□□ -1.39
SNRNP40-202ENST00000373720 ABCA12Q86UK0 2595 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 RBMY1BA6NDE4 496 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 RBMY1EA6NEQ0 496 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 C9orf118A6NHY6 69 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 TSHBP01222 138 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 RBMY1DP0C7P1 496 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 FXYD7P58549 80 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 C9orf66Q5T8R8 295 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 OR4C5Q8NGB2 326 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 RNASE8Q8TDE3 154 aaKnown RBP6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 PLEKHB2Q96CS7 222 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 CHAC1Q9BUX1 264 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 GTSF1LQ9H1H1 148 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 SPANXB1Q9NS25 103 aaPredicted RBP6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
SNRNP40-202ENST00000373720 TEX15Q9BXT5 2789 aa6.34□□□□□ -1.4
SNRNP40-202ENST00000373720 CRYBG3Q68DQ2 2970 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 TRBV7-3A0A075B6L6 115 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 TAX1BP3O14907 124 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 PF4P02776 101 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 AZU1P20160 251 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 GTSCR1Q86UQ5 136 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 CEND1Q8N111 149 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 KIR2DL5BQ8NHK3 375 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 COPS9Q8WXC6 57 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 AMELXQ99217 191 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 POLQO75417 2590 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 MXRA5Q9NR99 2828 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 MUC4Q99102 2169 aa6.33□□□□□ -1.4
SNRNP40-202ENST00000373720 ITPR3Q14573 2671 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 TINCRA0A1B0GVN0 87 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 RBMY1A1P0DJD3 496 aaKnown RBP6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 RBMY1CP0DJD4 496 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 PTTG1IPP53801 180 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 RBMY1FQ15415 496 aaKnown RBP6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 VAMP3Q15836 100 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 RRN3P1Q2M238 152 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 LYRM7Q5U5X0 104 aa6.32□□□□□ -1.4
SNRNP40-202ENST00000373720 FAM19A3Q7Z5A8 133 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms