RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 EREGO14944 169 aa13.69□□□□□ -0.22
SMNDC1-201ENST00000369592 SSTP61278 116 aa13.69□□□□□ -0.22
SMNDC1-201ENST00000369592 LYZL1Q6UWQ5 148 aa13.69□□□□□ -0.22
SMNDC1-201ENST00000369592 RNASE7Q9H1E1 156 aaKnown RBP13.69□□□□□ -0.22
SMNDC1-201ENST00000369592 M0QY20 66 aa13.68□□□□□ -0.22
SMNDC1-201ENST00000369592 FUSP35637 526 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMNDC1-201ENST00000369592 TRBV6-8A0A0A6YYG3 113 aa13.67□□□□□ -0.22
SMNDC1-201ENST00000369592 MAPKAPK5-AS1Q8N8E1 139 aa13.67□□□□□ -0.22
SMNDC1-201ENST00000369592 FAM210AQ96ND0 272 aa13.67□□□□□ -0.22
SMNDC1-201ENST00000369592 CHCHD7Q9BUK0 85 aa13.67□□□□□ -0.22
SMNDC1-201ENST00000369592 TPPP3Q9BW30 176 aa13.67□□□□□ -0.22
SMNDC1-201ENST00000369592 RPP21Q9H633 154 aaKnown RBP13.67□□□□□ -0.22
SMNDC1-201ENST00000369592 Q9HAA7 133 aa13.67□□□□□ -0.22
SMNDC1-201ENST00000369592 TOR2AQ5JU69 321 aa13.66□□□□□ -0.22
SMNDC1-201ENST00000369592 FAM231DQ6ZW35 169 aa13.66□□□□□ -0.22
SMNDC1-201ENST00000369592 F5H697 171 aa13.65□□□□□ -0.22
SMNDC1-201ENST00000369592 SMIM17P0DL12 118 aa13.65□□□□□ -0.22
SMNDC1-201ENST00000369592 NTF3P20783 257 aa13.65□□□□□ -0.22
SMNDC1-201ENST00000369592 NTM-AS1Q6ZSK4 140 aa13.65□□□□□ -0.22
SMNDC1-201ENST00000369592 GTSF1Q8WW33 167 aa13.65□□□□□ -0.22
SMNDC1-201ENST00000369592 TRAV8-3A0A0A6YYJ7 113 aa13.64□□□□□ -0.23
SMNDC1-201ENST00000369592 SUMO4Q6EEV6 95 aa13.64□□□□□ -0.23
SMNDC1-201ENST00000369592 SRP19P09132 144 aaKnown RBP13.63□□□□□ -0.23
SMNDC1-201ENST00000369592 DNAJC30Q96LL9 226 aa13.63□□□□□ -0.23
SMNDC1-201ENST00000369592 TM2D2Q9BX73 214 aa13.63□□□□□ -0.23
SMNDC1-201ENST00000369592 PSCAO43653 123 aa13.62□□□□□ -0.23
SMNDC1-201ENST00000369592 TRGC1P0CF51 173 aa13.62□□□□□ -0.23
SMNDC1-201ENST00000369592 ATRAIDQ6UW56 229 aa13.62□□□□□ -0.23
SMNDC1-201ENST00000369592 FOXA3P55318 350 aaPredicted RBP13.61□□□□□ -0.23
SMNDC1-201ENST00000369592 KRTAP10-1P60331 282 aa13.61□□□□□ -0.23
SMNDC1-201ENST00000369592 WFDC2Q14508 124 aa13.61□□□□□ -0.23
SMNDC1-201ENST00000369592 LINC01551Q86U37 167 aa13.61□□□□□ -0.23
SMNDC1-201ENST00000369592 EIF5A2Q9GZV4 153 aaKnown RBP13.61□□□□□ -0.23
SMNDC1-201ENST00000369592 DPH3P1Q9H4G8 78 aa13.61□□□□□ -0.23
SMNDC1-201ENST00000369592 MGPP08493 103 aa13.6□□□□□ -0.23
SMNDC1-201ENST00000369592 TMEM97Q5BJF2 176 aa13.6□□□□□ -0.23
SMNDC1-201ENST00000369592 CT83Q5H943 113 aa13.6□□□□□ -0.23
SMNDC1-201ENST00000369592 Q8N814 137 aa13.6□□□□□ -0.23
SMNDC1-201ENST00000369592 SMIM7Q9BQ49 75 aa13.6□□□□□ -0.23
SMNDC1-201ENST00000369592 KLK12Q9UKR0 248 aa13.6□□□□□ -0.23
SMNDC1-201ENST00000369592 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
SMNDC1-201ENST00000369592 H7C1H1 209 aa13.59□□□□□ -0.23
SMNDC1-201ENST00000369592 GATCO43716 136 aaKnown RBP13.59□□□□□ -0.23
SMNDC1-201ENST00000369592 TEX261Q6UWH6 196 aa13.59□□□□□ -0.23
SMNDC1-201ENST00000369592 NTN5Q8WTR8 489 aaPredicted RBP13.59□□□□□ -0.23
SMNDC1-201ENST00000369592 DNAH8Q96JB1 4490 aa13.58□□□□□ -0.23
SMNDC1-201ENST00000369592 A0A087WX48 190 aa13.58□□□□□ -0.24
SMNDC1-201ENST00000369592 IQCJQ1A5X6 159 aa13.58□□□□□ -0.24
SMNDC1-201ENST00000369592 MPV17L2Q567V2 206 aa13.58□□□□□ -0.24
SMNDC1-201ENST00000369592 RASL11AQ6T310 242 aa13.58□□□□□ -0.24
SMNDC1-201ENST00000369592 A8MWL6 223 aa13.57□□□□□ -0.24
SMNDC1-201ENST00000369592 C9JQL5 133 aa13.57□□□□□ -0.24
SMNDC1-201ENST00000369592 XGP55808 180 aa13.57□□□□□ -0.24
SMNDC1-201ENST00000369592 ELOBQ15370 118 aa13.57□□□□□ -0.24
SMNDC1-201ENST00000369592 TWIST1Q15672 202 aa13.57□□□□□ -0.24
SMNDC1-201ENST00000369592 NIT2Q9NQR4 276 aa13.57□□□□□ -0.24
SMNDC1-201ENST00000369592 COX11Q9Y6N1 276 aa13.57□□□□□ -0.24
SMNDC1-201ENST00000369592 ZNF727A8MUV8 499 aa13.56□□□□□ -0.24
SMNDC1-201ENST00000369592 CEBPGP53567 150 aa13.56□□□□□ -0.24
SMNDC1-201ENST00000369592 ENHOQ6UWT2 76 aa13.56□□□□□ -0.24
SMNDC1-201ENST00000369592 Q8N1X5 172 aa13.56□□□□□ -0.24
SMNDC1-201ENST00000369592 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.56□□□□□ -0.24
SMNDC1-201ENST00000369592 OSTCQ9NRP0 149 aa13.56□□□□□ -0.24
SMNDC1-201ENST00000369592 GCSHP23434 173 aa13.55□□□□□ -0.24
SMNDC1-201ENST00000369592 GATD1Q8NB37 220 aa13.55□□□□□ -0.24
SMNDC1-201ENST00000369592 FRZBQ92765 325 aa13.55□□□□□ -0.24
SMNDC1-201ENST00000369592 PKIAP61925 76 aa13.54□□□□□ -0.24
SMNDC1-201ENST00000369592 UBE2WQ96B02 151 aa13.54□□□□□ -0.24
SMNDC1-201ENST00000369592 RMI2Q96E14 147 aa13.54□□□□□ -0.24
SMNDC1-201ENST00000369592 PGLYRP4Q96LB8 373 aa13.54□□□□□ -0.24
SMNDC1-201ENST00000369592 CHCHD5Q9BSY4 110 aa13.54□□□□□ -0.24
SMNDC1-201ENST00000369592 TRBV25-1A0A075B6N4 114 aa13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 FAM231BA6NCW3 169 aa13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 TMEM262E9PQX1 116 aa13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 SRSF3P84103 164 aaKnown RBP13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 Q0VG73 95 aa13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 Q8N976 141 aa13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 TSKUQ8WUA8 353 aa13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 GFRA4Q9GZZ7 299 aa13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 PRR34Q9NV39 138 aa13.53□□□□□ -0.24
SMNDC1-201ENST00000369592 IGLV5-52A0A0A0MRZ9 124 aa13.52□□□□□ -0.25
SMNDC1-201ENST00000369592 RBX1P62877 108 aa13.52□□□□□ -0.25
SMNDC1-201ENST00000369592 FAM74A3Q4VXF1 159 aa13.52□□□□□ -0.25
SMNDC1-201ENST00000369592 KCNIP4Q6PIL6 250 aa13.52□□□□□ -0.25
SMNDC1-201ENST00000369592 FAT1Q14517 4588 aa13.51□□□□□ -0.25
SMNDC1-201ENST00000369592 IGKV2D-24A0A075B6R9 120 aa13.51□□□□□ -0.25
SMNDC1-201ENST00000369592 IGHV1-24A0A0C4DH33 117 aa13.51□□□□□ -0.25
SMNDC1-201ENST00000369592 C15orf54Q8N8G6 183 aa13.51□□□□□ -0.25
SMNDC1-201ENST00000369592 BAALCQ8WXS3 180 aa13.51□□□□□ -0.25
SMNDC1-201ENST00000369592 ISOC2Q96AB3 205 aa13.51□□□□□ -0.25
SMNDC1-201ENST00000369592 SMDT1Q9H4I9 107 aa13.51□□□□□ -0.25
SMNDC1-201ENST00000369592 V9GYV3 84 aa13.51□□□□□ -0.25
SMNDC1-201ENST00000369592 DMBT1Q9UGM3 2413 aaPredicted RBP13.5□□□□□ -0.25
SMNDC1-201ENST00000369592 TRAV26-2A0A0B4J265 109 aa13.5□□□□□ -0.25
SMNDC1-201ENST00000369592 RPL23P62829 140 aaKnown RBP13.5□□□□□ -0.25
SMNDC1-201ENST00000369592 GAGE6Q13070 117 aa13.5□□□□□ -0.25
SMNDC1-201ENST00000369592 TMEM241Q24JQ0 296 aa13.5□□□□□ -0.25
SMNDC1-201ENST00000369592 KRTAP26-1Q6PEX3 210 aa13.5□□□□□ -0.25
SMNDC1-201ENST00000369592 HIGD1CA8MV81 97 aa13.49□□□□□ -0.25
SMNDC1-201ENST00000369592 LECT2O14960 151 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms