RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 PRB2P02812 416 aaPredicted RBP7.96□□□□□ -1.14
PRDM1-201ENST00000369089 PIK3CD-AS1Q5SR53 167 aa7.96□□□□□ -1.14
PRDM1-201ENST00000369089 RNF5Q99942 180 aa7.96□□□□□ -1.14
PRDM1-201ENST00000369089 LINC01548A6NM66 108 aa7.96□□□□□ -1.14
PRDM1-201ENST00000369089 BRWD1-AS2P59051 145 aa7.96□□□□□ -1.14
PRDM1-201ENST00000369089 MRPL36Q9P0J6 103 aaKnown RBP7.96□□□□□ -1.14
PRDM1-201ENST00000369089 DPM3Q9P2X0 92 aa7.96□□□□□ -1.14
PRDM1-201ENST00000369089 LTBP2Q14767 1821 aa7.95□□□□□ -1.14
PRDM1-201ENST00000369089 IGHV1-46P01743 117 aa7.95□□□□□ -1.14
PRDM1-201ENST00000369089 ZNF833PQ6ZTB9 187 aa7.95□□□□□ -1.14
PRDM1-201ENST00000369089 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
PRDM1-201ENST00000369089 GATA4P43694 442 aa7.95□□□□□ -1.14
PRDM1-201ENST00000369089 KIAA1671Q9BY89 1806 aa7.95□□□□□ -1.14
PRDM1-201ENST00000369089 TMEM256-PLSCR3K7ERE1 68 aa7.94□□□□□ -1.14
PRDM1-201ENST00000369089 FAM222AQ5U5X8 452 aa7.94□□□□□ -1.14
PRDM1-201ENST00000369089 PLAC8L1A1L4L8 177 aa7.94□□□□□ -1.14
PRDM1-201ENST00000369089 COX6B1P14854 86 aa7.94□□□□□ -1.14
PRDM1-201ENST00000369089 UBE2AP49459 152 aa7.94□□□□□ -1.14
PRDM1-201ENST00000369089 COL4A3Q01955 1670 aa7.94□□□□□ -1.14
PRDM1-201ENST00000369089 PCNX3Q9H6A9 2034 aa7.94□□□□□ -1.14
PRDM1-201ENST00000369089 FAM223BA6NKX1 122 aa7.94□□□□□ -1.14
PRDM1-201ENST00000369089 LYNX1G3V0Z9 82 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 PROP1O75360 226 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 LYNX1P0DP58 116 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 NDUFS5O43920 106 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 C17orf58Q2M2W7 97 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 KRTAP27-1Q3LI81 207 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 AGRNO00468 2067 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 TNFRSF13BO14836 293 aaPredicted RBP7.93□□□□□ -1.14
PRDM1-201ENST00000369089 CRIP1P50238 77 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 RNASE13Q5GAN3 156 aaKnown RBP7.93□□□□□ -1.14
PRDM1-201ENST00000369089 OTOGLQ3ZCN5 2332 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 IGHV3-73A0A0B4J1V6 119 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 CHKB-CPT1BH3BT56 60 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 PDE6GP18545 87 aa7.93□□□□□ -1.14
PRDM1-201ENST00000369089 PTPRQQ9UMZ3 2332 aa7.92□□□□□ -1.14
PRDM1-201ENST00000369089 IGKV1D-37A0A075B6S9 117 aa7.92□□□□□ -1.14
PRDM1-201ENST00000369089 BUB1B-PAK6H3BSN5 160 aa7.92□□□□□ -1.14
PRDM1-201ENST00000369089 LINC01561Q8N1V8 128 aa7.92□□□□□ -1.14
PRDM1-201ENST00000369089 ZNRD1Q9P1U0 126 aa7.92□□□□□ -1.14
PRDM1-201ENST00000369089 LENEPQ9Y5L5 61 aa7.92□□□□□ -1.14
PRDM1-201ENST00000369089 A8MZ25 164 aa7.92□□□□□ -1.14
PRDM1-201ENST00000369089 TEX22C9J3V5 150 aa7.92□□□□□ -1.14
PRDM1-201ENST00000369089 MRPL53Q96EL3 112 aaKnown RBP7.92□□□□□ -1.14
PRDM1-201ENST00000369089 NCOA6Q14686 2063 aaPredicted RBP7.92□□□□□ -1.14
PRDM1-201ENST00000369089 NCR3O14931 201 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 ESRGQ1W209 222 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 SUMO4Q6EEV6 95 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 MALRD1Q5VYJ5 2156 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 MED13Q9UHV7 2174 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 IGHV1-3A0A0C4DH29 117 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 WDR87Q6ZQQ6 2873 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 A6NED7 52 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 EIF4EBP1Q13541 118 aaPredicted RBP7.91□□□□□ -1.14
PRDM1-201ENST00000369089 EML6Q6ZMW3 1958 aa7.91□□□□□ -1.14
PRDM1-201ENST00000369089 A0A0J9YX75 114 aa7.9□□□□□ -1.14
PRDM1-201ENST00000369089 IGLV2-11P01706 119 aa7.9□□□□□ -1.14
PRDM1-201ENST00000369089 IGHV3OR16-10A0A075B7F0 116 aa7.9□□□□□ -1.14
PRDM1-201ENST00000369089 SAA4P35542 130 aa7.9□□□□□ -1.14
PRDM1-201ENST00000369089 C15orf32Q32M92 178 aa7.9□□□□□ -1.14
PRDM1-201ENST00000369089 FREM1Q5H8C1 2179 aa7.9□□□□□ -1.14
PRDM1-201ENST00000369089 IGKV1-17P01599 117 aa7.9□□□□□ -1.15
PRDM1-201ENST00000369089 TPSG1Q9NRR2 321 aa7.9□□□□□ -1.15
PRDM1-201ENST00000369089 PIEZO1Q92508 2521 aa7.9□□□□□ -1.15
PRDM1-201ENST00000369089 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.15
PRDM1-201ENST00000369089 ZNF80P51504 273 aaPredicted RBP7.9□□□□□ -1.15
PRDM1-201ENST00000369089 MP68P56378 58 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 GAFA1Q96PS6 74 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 PAX8Q06710 450 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 LY6EQ16553 131 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 POM121L12Q8N7R1 296 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 NRACQ8N912 160 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 LINC00308Q8TCZ7 52 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 NOTCH2Q04721 2471 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 C4orf48Q5BLP8 95 aa7.89□□□□□ -1.15
PRDM1-201ENST00000369089 H3BQ85 93 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 CCL19Q99731 98 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 OPRPNQ99935 248 aaPredicted RBP7.88□□□□□ -1.15
PRDM1-201ENST00000369089 TNRC6BQ9UPQ9 1833 aaKnown RBP7.88□□□□□ -1.15
PRDM1-201ENST00000369089 EXPH5Q8NEV8 1989 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 DKK1O94907 266 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 C11orf44Q8N8P7 122 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 CCKP06307 115 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 COX7B2Q8TF08 81 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 RMI2Q96E14 147 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 ZNF503-AS2A6NEH8 195 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 IGHV1-8P0DP01 117 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 COL8A2P25067 703 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 ZNF672Q499Z4 452 aaPredicted RBP7.88□□□□□ -1.15
PRDM1-201ENST00000369089 C20orf203Q8NBC4 194 aa7.88□□□□□ -1.15
PRDM1-201ENST00000369089 NACAE9PAV3 2078 aa7.87□□□□□ -1.15
PRDM1-201ENST00000369089 COL4A4P53420 1690 aaPredicted RBP7.87□□□□□ -1.15
PRDM1-201ENST00000369089 GNLYP22749 145 aa7.87□□□□□ -1.15
PRDM1-201ENST00000369089 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
PRDM1-201ENST00000369089 APRG1Q8IVJ8 170 aa7.87□□□□□ -1.15
PRDM1-201ENST00000369089 ANKHD1Q8IWZ3 2542 aaKnown RBP7.87□□□□□ -1.15
PRDM1-201ENST00000369089 TMEM178BH3BS89 294 aa7.87□□□□□ -1.15
PRDM1-201ENST00000369089 PSPHP1O15172 72 aa7.87□□□□□ -1.15
PRDM1-201ENST00000369089 NREPQ16612 68 aa7.87□□□□□ -1.15
PRDM1-201ENST00000369089 IGFL3Q6UXB1 125 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms