RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 IGLV4-3A0A075B6K6 122 aa13.33□□□□□ -0.28
CHTOP-201ENST00000368686 CDX4O14627 284 aaPredicted RBP13.33□□□□□ -0.28
CHTOP-201ENST00000368686 PEMTQ9UBM1 199 aa13.33□□□□□ -0.28
CHTOP-201ENST00000368686 NDUFA12Q9UI09 145 aa13.33□□□□□ -0.28
CHTOP-201ENST00000368686 TECTAO75443 2155 aa13.33□□□□□ -0.28
CHTOP-201ENST00000368686 M0R1W7 72 aa13.33□□□□□ -0.28
CHTOP-201ENST00000368686 Q8N9W7 124 aa13.33□□□□□ -0.28
CHTOP-201ENST00000368686 C2orf48Q96LS8 159 aa13.33□□□□□ -0.28
CHTOP-201ENST00000368686 DMDP11532 3685 aa13.33□□□□□ -0.28
CHTOP-201ENST00000368686 IGHV1-58A0A0C4DH39 117 aa13.32□□□□□ -0.28
CHTOP-201ENST00000368686 B9A039 149 aa13.32□□□□□ -0.28
CHTOP-201ENST00000368686 ATOX1O00244 68 aa13.32□□□□□ -0.28
CHTOP-201ENST00000368686 EDA2RQ9HAV5 297 aa13.32□□□□□ -0.28
CHTOP-201ENST00000368686 WNK2Q9Y3S1 2297 aa13.31□□□□□ -0.28
CHTOP-201ENST00000368686 ZFHX4Q86UP3 3567 aa13.31□□□□□ -0.28
CHTOP-201ENST00000368686 SOCS3O14543 225 aa13.3□□□□□ -0.28
CHTOP-201ENST00000368686 TIMM17BO60830 172 aa13.3□□□□□ -0.28
CHTOP-201ENST00000368686 HIST1H4AP62805 103 aaKnown RBP13.3□□□□□ -0.28
CHTOP-201ENST00000368686 MRPS36P82909 103 aaKnown RBP13.3□□□□□ -0.28
CHTOP-201ENST00000368686 DEFB109BQ30KR1 87 aa13.3□□□□□ -0.28
CHTOP-201ENST00000368686 DUX5Q96PT3 197 aa13.3□□□□□ -0.28
CHTOP-201ENST00000368686 ATP6V0E1O15342 81 aa13.29□□□□□ -0.28
CHTOP-201ENST00000368686 PLA2G2CQ5R387 149 aa13.29□□□□□ -0.28
CHTOP-201ENST00000368686 PRRC2AP48634 2157 aaKnown RBP13.29□□□□□ -0.28
CHTOP-201ENST00000368686 M0QY20 66 aa13.29□□□□□ -0.28
CHTOP-201ENST00000368686 NPC2P61916 151 aa13.29□□□□□ -0.28
CHTOP-201ENST00000368686 DAND5Q8N907 189 aa13.28□□□□□ -0.28
CHTOP-201ENST00000368686 SPENQ96T58 3664 aaKnown RBP13.28□□□□□ -0.28
CHTOP-201ENST00000368686 COX7A2LO14548 114 aa13.28□□□□□ -0.28
CHTOP-201ENST00000368686 TRACP01848 142 aa13.28□□□□□ -0.28
CHTOP-201ENST00000368686 FAM74A4Q5TZK3 123 aa13.28□□□□□ -0.28
CHTOP-201ENST00000368686 DEFB1P60022 68 aa13.27□□□□□ -0.28
CHTOP-201ENST00000368686 RPL11P62913 178 aaKnown RBP13.27□□□□□ -0.28
CHTOP-201ENST00000368686 MINOS1Q5TGZ0 78 aa13.27□□□□□ -0.28
CHTOP-201ENST00000368686 MINOS1-NBL1R4GNA1 71 aa13.27□□□□□ -0.28
CHTOP-201ENST00000368686 SMG1Q96Q15 3661 aaKnown RBP13.27□□□□□ -0.29
CHTOP-201ENST00000368686 VSIG2Q96IQ7 327 aa13.27□□□□□ -0.29
CHTOP-201ENST00000368686 TRAV41A0A0B4J266 112 aa13.26□□□□□ -0.29
CHTOP-201ENST00000368686 TMEM258P61165 79 aa13.26□□□□□ -0.29
CHTOP-201ENST00000368686 DAZ2Q13117 558 aaKnown RBP13.26□□□□□ -0.29
CHTOP-201ENST00000368686 DAZ4Q86SG3 579 aaKnown RBP13.26□□□□□ -0.29
CHTOP-201ENST00000368686 DEFB123Q8N688 67 aa13.26□□□□□ -0.29
CHTOP-201ENST00000368686 DAZ1Q9NQZ3 744 aaKnown RBP13.26□□□□□ -0.29
CHTOP-201ENST00000368686 DAZ3Q9NR90 486 aaKnown RBP13.26□□□□□ -0.29
CHTOP-201ENST00000368686 PYGO1Q9Y3Y4 419 aa13.26□□□□□ -0.29
CHTOP-201ENST00000368686 CD28P10747 220 aa13.25□□□□□ -0.29
CHTOP-201ENST00000368686 IGFL3Q6UXB1 125 aa13.25□□□□□ -0.29
CHTOP-201ENST00000368686 hADV29S1A0JD25 119 aa13.25□□□□□ -0.29
CHTOP-201ENST00000368686 KLLNB2CW77 178 aa13.25□□□□□ -0.29
CHTOP-201ENST00000368686 F6UB75 175 aa13.24□□□□□ -0.29
CHTOP-201ENST00000368686 INAFM2P0DMQ5 153 aa13.24□□□□□ -0.29
CHTOP-201ENST00000368686 CITED2Q99967 270 aaPredicted RBP13.24□□□□□ -0.29
CHTOP-201ENST00000368686 POLEQ07864 2286 aa13.24□□□□□ -0.29
CHTOP-201ENST00000368686 CUL9Q8IWT3 2517 aa13.24□□□□□ -0.29
CHTOP-201ENST00000368686 G3V318 75 aa13.23□□□□□ -0.29
CHTOP-201ENST00000368686 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
CHTOP-201ENST00000368686 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
CHTOP-201ENST00000368686 DPH3Q96FX2 82 aa13.22□□□□□ -0.29
CHTOP-201ENST00000368686 DMXL2Q8TDJ6 3036 aa13.22□□□□□ -0.29
CHTOP-201ENST00000368686 TINCRA0A1B0GVN0 87 aa13.22□□□□□ -0.29
CHTOP-201ENST00000368686 C9orf85Q96MD7 179 aa13.22□□□□□ -0.29
CHTOP-201ENST00000368686 ABCA4P78363 2273 aa13.21□□□□□ -0.29
CHTOP-201ENST00000368686 LOC400499M0QZD8 3231 aa13.21□□□□□ -0.29
CHTOP-201ENST00000368686 TIRAPP58753 221 aa13.21□□□□□ -0.29
CHTOP-201ENST00000368686 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
CHTOP-201ENST00000368686 BAALC-AS2P0C853 105 aa13.2□□□□□ -0.3
CHTOP-201ENST00000368686 RPL18AQ02543 176 aaKnown RBP13.2□□□□□ -0.3
CHTOP-201ENST00000368686 BEAN1Q3B7T3 259 aa13.2□□□□□ -0.3
CHTOP-201ENST00000368686 CIRBPQ14011 172 aaKnown RBP13.19□□□□□ -0.3
CHTOP-201ENST00000368686 FAM104AQ969W3 186 aa13.19□□□□□ -0.3
CHTOP-201ENST00000368686 IGHV3-16A0A0C4DH30 117 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 FAM223BA6NKX1 122 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 NDUFA4O00483 81 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 PF4V1P10720 104 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 FAM223AQ8IWN6 122 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 CEP250Q9BV73 2442 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 A8MZ25 164 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 NDUFA1O15239 70 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 UNQ9165/PRO28630Q6UXU0 137 aa13.18□□□□□ -0.3
CHTOP-201ENST00000368686 SERP2Q8N6R1 65 aa13.17□□□□□ -0.3
CHTOP-201ENST00000368686 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
CHTOP-201ENST00000368686 CYSTM1Q9H1C7 97 aa13.17□□□□□ -0.3
CHTOP-201ENST00000368686 IGHV3OR16-10A0A075B7F0 116 aa13.16□□□□□ -0.3
CHTOP-201ENST00000368686 LINC00308Q8TCZ7 52 aa13.16□□□□□ -0.3
CHTOP-201ENST00000368686 C22orf24Q9Y442 160 aa13.16□□□□□ -0.3
CHTOP-201ENST00000368686 RP1L1Q8IWN7 2480 aaPredicted RBP13.16□□□□□ -0.3
CHTOP-201ENST00000368686 KIR2DL5BQ8NHK3 375 aa13.15□□□□□ -0.3
CHTOP-201ENST00000368686 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.15□□□□□ -0.3
CHTOP-201ENST00000368686 UPK3BQ9BT76 320 aa13.14□□□□□ -0.31
CHTOP-201ENST00000368686 ZDBF2Q9HCK1 2354 aa13.14□□□□□ -0.31
CHTOP-201ENST00000368686 IGF2-ASQ6U949 168 aa13.14□□□□□ -0.31
CHTOP-201ENST00000368686 KLRB1Q12918 225 aa13.13□□□□□ -0.31
CHTOP-201ENST00000368686 IGKV3-7A0A075B6H7 116 aa13.12□□□□□ -0.31
CHTOP-201ENST00000368686 TRAV13-1A0A0B4J241 112 aa13.12□□□□□ -0.31
CHTOP-201ENST00000368686 F5H768 121 aa13.12□□□□□ -0.31
CHTOP-201ENST00000368686 ZNF415Q09FC8 603 aa13.12□□□□□ -0.31
CHTOP-201ENST00000368686 RNASE13Q5GAN3 156 aaKnown RBP13.12□□□□□ -0.31
CHTOP-201ENST00000368686 Q6JHZ5 121 aa13.11□□□□□ -0.31
CHTOP-201ENST00000368686 DNAL4O96015 105 aa13.1□□□□□ -0.31
CHTOP-201ENST00000368686 OXTP01178 125 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms