RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 RASL11AQ6T310 242 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 ATRAIDQ6UW56 229 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 GATD1Q8NB37 220 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 RNF185Q96GF1 192 aa9.6□□□□□ -0.87
TPM3-211ENST00000368531 TRBV7-3A0A075B6L6 115 aa9.59□□□□□ -0.87
TPM3-211ENST00000368531 IGHV3-38A0A0C4DH36 116 aa9.59□□□□□ -0.87
TPM3-211ENST00000368531 S100A8P05109 93 aa9.59□□□□□ -0.87
TPM3-211ENST00000368531 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
TPM3-211ENST00000368531 ATP5L2Q7Z4Y8 100 aa9.59□□□□□ -0.87
TPM3-211ENST00000368531 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
TPM3-211ENST00000368531 TMEM242Q9NWH2 141 aa9.59□□□□□ -0.87
TPM3-211ENST00000368531 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
TPM3-211ENST00000368531 CSMD3Q7Z407 3707 aa9.59□□□□□ -0.87
TPM3-211ENST00000368531 SMKR1H3BMG3 65 aa9.58□□□□□ -0.88
TPM3-211ENST00000368531 GAS8-AS1O95177 125 aa9.58□□□□□ -0.88
TPM3-211ENST00000368531 LINC00694P0DN24 101 aa9.58□□□□□ -0.88
TPM3-211ENST00000368531 FAM104BQ5XKR9 115 aa9.58□□□□□ -0.88
TPM3-211ENST00000368531 STARD9Q9P2P6 4700 aa9.57□□□□□ -0.88
TPM3-211ENST00000368531 NCR2O95944 276 aa9.57□□□□□ -0.88
TPM3-211ENST00000368531 UBE2D3P61077 147 aa9.57□□□□□ -0.88
TPM3-211ENST00000368531 UBE2D2P62837 147 aa9.57□□□□□ -0.88
TPM3-211ENST00000368531 MRPL51Q4U2R6 128 aaKnown RBP9.57□□□□□ -0.88
TPM3-211ENST00000368531 DEFB104AQ8WTQ1 72 aa9.57□□□□□ -0.88
TPM3-211ENST00000368531 GTSF1LQ9H1H1 148 aa9.57□□□□□ -0.88
TPM3-211ENST00000368531 NIT2Q9NQR4 276 aa9.57□□□□□ -0.88
TPM3-211ENST00000368531 TENM2Q9NT68 2774 aa9.56□□□□□ -0.88
TPM3-211ENST00000368531 IGLV2-18A0A075B6J9 118 aa9.56□□□□□ -0.88
TPM3-211ENST00000368531 OR10J3Q5JRS4 329 aa9.56□□□□□ -0.88
TPM3-211ENST00000368531 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
TPM3-211ENST00000368531 DNAJC30Q96LL9 226 aa9.56□□□□□ -0.88
TPM3-211ENST00000368531 MRPS16Q9Y3D3 137 aaKnown RBP9.56□□□□□ -0.88
TPM3-211ENST00000368531 TRAV9-1A0A075B6T8 112 aa9.55□□□□□ -0.88
TPM3-211ENST00000368531 RPS10P46783 165 aaKnown RBP9.55□□□□□ -0.88
TPM3-211ENST00000368531 TGIF2-C20orf24A0A0A6YYL0 155 aa9.54□□□□□ -0.88
TPM3-211ENST00000368531 CKS2P33552 79 aa9.54□□□□□ -0.88
TPM3-211ENST00000368531 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.54□□□□□ -0.88
TPM3-211ENST00000368531 D6R8Y8 96 aa9.53□□□□□ -0.88
TPM3-211ENST00000368531 M0R2N4 97 aa9.53□□□□□ -0.88
TPM3-211ENST00000368531 TMEM136Q6ZRR5 245 aa9.53□□□□□ -0.88
TPM3-211ENST00000368531 WFDC10BQ8IUB3 73 aa9.53□□□□□ -0.88
TPM3-211ENST00000368531 Q9H8V8 135 aa9.53□□□□□ -0.88
TPM3-211ENST00000368531 ST20Q9HBF5 79 aa9.53□□□□□ -0.88
TPM3-211ENST00000368531 TRAV8-6A0A0B4J262 113 aa9.52□□□□□ -0.89
TPM3-211ENST00000368531 TIRAPP58753 221 aa9.52□□□□□ -0.89
TPM3-211ENST00000368531 ELOBQ15370 118 aa9.52□□□□□ -0.89
TPM3-211ENST00000368531 LELP1Q5T871 98 aa9.52□□□□□ -0.89
TPM3-211ENST00000368531 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.89
TPM3-211ENST00000368531 CBLN2Q8IUK8 224 aa9.52□□□□□ -0.89
TPM3-211ENST00000368531 FRZBQ92765 325 aa9.52□□□□□ -0.89
TPM3-211ENST00000368531 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.89
TPM3-211ENST00000368531 DYNC2H1Q8NCM8 4307 aaKnown RBP9.51□□□□□ -0.89
TPM3-211ENST00000368531 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
TPM3-211ENST00000368531 SIVA1O15304 175 aa9.51□□□□□ -0.89
TPM3-211ENST00000368531 KIAA1644Q3SXP7 199 aa9.51□□□□□ -0.89
TPM3-211ENST00000368531 NRACQ8N912 160 aa9.51□□□□□ -0.89
TPM3-211ENST00000368531 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
TPM3-211ENST00000368531 SMCO4Q9NRQ5 59 aa9.51□□□□□ -0.89
TPM3-211ENST00000368531 PMCHP20382 165 aa9.5□□□□□ -0.89
TPM3-211ENST00000368531 NTM-AS1Q6ZSK4 140 aa9.5□□□□□ -0.89
TPM3-211ENST00000368531 ORMDL3Q8N138 153 aa9.5□□□□□ -0.89
TPM3-211ENST00000368531 TRBV6-8A0A0A6YYG3 113 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 TRBV6-5A0A0K0K1A5 114 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 TNFRSF6BO95407 300 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 PPP1R17O96001 155 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 NPYP01303 97 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 HLA-DQA1P01909 254 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 APCSP02743 223 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 COTL1Q14019 142 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 PRELID3AQ96N28 172 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 GNB1LQ9BYB4 327 aa9.49□□□□□ -0.89
TPM3-211ENST00000368531 SCO1O75880 301 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 IGHV3-30P01768 117 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 IGHV3-33P01772 117 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 PPBPP02775 128 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 IGHV3-30-3P0DP02 117 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 IGHV3-30-5P0DP03 117 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
TPM3-211ENST00000368531 COX19Q49B96 90 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 TMEM97Q5BJF2 176 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 Q8N3U1 123 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 CHCHD5Q9BSY4 110 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 TMEM70Q9BUB7 260 aa9.48□□□□□ -0.89
TPM3-211ENST00000368531 TRBV24-1A0A075B6N3 115 aa9.47□□□□□ -0.89
TPM3-211ENST00000368531 TRBV25-1A0A075B6N4 114 aa9.47□□□□□ -0.89
TPM3-211ENST00000368531 IGHV1-24A0A0C4DH33 117 aa9.47□□□□□ -0.89
TPM3-211ENST00000368531 TMEM262E9PQX1 116 aa9.47□□□□□ -0.89
TPM3-211ENST00000368531 I3L3M4 83 aa9.47□□□□□ -0.89
TPM3-211ENST00000368531 POLR2KP53803 58 aaKnown RBP9.47□□□□□ -0.89
TPM3-211ENST00000368531 FABP9Q0Z7S8 132 aa9.47□□□□□ -0.89
TPM3-211ENST00000368531 YPEL4Q96NS1 127 aa9.47□□□□□ -0.89
TPM3-211ENST00000368531 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
TPM3-211ENST00000368531 PLECQ15149 4684 aaKnown RBP9.46□□□□□ -0.89
TPM3-211ENST00000368531 NBDYA0A0U1RRE5 68 aa9.46□□□□□ -0.9
TPM3-211ENST00000368531 LOC389332A0A1B0GUA5 103 aa9.46□□□□□ -0.9
TPM3-211ENST00000368531 VCYO14598 125 aa9.46□□□□□ -0.9
TPM3-211ENST00000368531 AMTP48728 403 aa9.46□□□□□ -0.9
TPM3-211ENST00000368531 GAGE6Q13070 117 aa9.46□□□□□ -0.9
TPM3-211ENST00000368531 TRAPPC1Q9Y5R8 145 aa9.46□□□□□ -0.9
TPM3-211ENST00000368531 ATP6V1G1O75348 118 aa9.45□□□□□ -0.9
TPM3-211ENST00000368531 DNAH10OSP0CZ25 163 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms