RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 UFSP1Q6NVU6 142 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 Q6ZSN1 163 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 SLC25A29Q8N8R3 303 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 NXPH4O95158 308 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 CCL18P55774 89 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 MSRB1Q9NZV6 116 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 IGLV2-18A0A075B6J9 118 aa10.41□□□□□ -0.74
SMPDL3A-201ENST00000368440 A0A087WWL8 130 aa10.41□□□□□ -0.74
SMPDL3A-201ENST00000368440 MT-ND6P03923 174 aa10.41□□□□□ -0.74
SMPDL3A-201ENST00000368440 NTF3P20783 257 aa10.41□□□□□ -0.74
SMPDL3A-201ENST00000368440 CTRLP40313 264 aa10.41□□□□□ -0.74
SMPDL3A-201ENST00000368440 COX19Q49B96 90 aa10.41□□□□□ -0.74
SMPDL3A-201ENST00000368440 RASL11AQ6T310 242 aa10.41□□□□□ -0.74
SMPDL3A-201ENST00000368440 CIDEAO60543 219 aa10.4□□□□□ -0.74
SMPDL3A-201ENST00000368440 MRPL23Q16540 153 aaKnown RBP10.4□□□□□ -0.74
SMPDL3A-201ENST00000368440 FAM74A4Q5TZK3 123 aa10.4□□□□□ -0.74
SMPDL3A-201ENST00000368440 ZFP2Q6ZN57 461 aa10.4□□□□□ -0.74
SMPDL3A-201ENST00000368440 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
SMPDL3A-201ENST00000368440 M0R2N4 97 aa10.4□□□□□ -0.75
SMPDL3A-201ENST00000368440 CRYGDP07320 174 aa10.4□□□□□ -0.75
SMPDL3A-201ENST00000368440 LOC105371267A0A1B0GV96 52 aa10.39□□□□□ -0.75
SMPDL3A-201ENST00000368440 TRBV6-4A0A1B0GX49 114 aa10.39□□□□□ -0.75
SMPDL3A-201ENST00000368440 SPANXN1Q5VSR9 72 aa10.39□□□□□ -0.75
SMPDL3A-201ENST00000368440 Q9UF83 564 aa10.39□□□□□ -0.75
SMPDL3A-201ENST00000368440 F2Z2F3 143 aa10.38□□□□□ -0.75
SMPDL3A-201ENST00000368440 SRIP30626 198 aa10.38□□□□□ -0.75
SMPDL3A-201ENST00000368440 RHOHQ15669 191 aa10.38□□□□□ -0.75
SMPDL3A-201ENST00000368440 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
SMPDL3A-201ENST00000368440 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
SMPDL3A-201ENST00000368440 S100A8P05109 93 aa10.38□□□□□ -0.75
SMPDL3A-201ENST00000368440 NEGR1Q7Z3B1 354 aa10.38□□□□□ -0.75
SMPDL3A-201ENST00000368440 MRPS16Q9Y3D3 137 aaKnown RBP10.38□□□□□ -0.75
SMPDL3A-201ENST00000368440 RHODO00212 210 aa10.37□□□□□ -0.75
SMPDL3A-201ENST00000368440 LYPD5Q6UWN5 251 aa10.37□□□□□ -0.75
SMPDL3A-201ENST00000368440 A0A1B0GW15 77 aa10.36□□□□□ -0.75
SMPDL3A-201ENST00000368440 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
SMPDL3A-201ENST00000368440 PRADC1Q9BSG0 188 aa10.36□□□□□ -0.75
SMPDL3A-201ENST00000368440 C5orf52A6NGY3 159 aa10.36□□□□□ -0.75
SMPDL3A-201ENST00000368440 Q6ZR54 194 aa10.36□□□□□ -0.75
SMPDL3A-201ENST00000368440 UPK3BQ9BT76 320 aa10.36□□□□□ -0.75
SMPDL3A-201ENST00000368440 IQCJQ1A5X6 159 aa10.35□□□□□ -0.75
SMPDL3A-201ENST00000368440 CNFNQ9BYD5 112 aa10.35□□□□□ -0.75
SMPDL3A-201ENST00000368440 EVI2AP22794 236 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 Q9H8V8 135 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 DNAH2Q9P225 4427 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 GAGE12JA6NER3 117 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 CACNG7P62955 275 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 GAGE1Q13065 139 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 GAGE4Q13068 117 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 GAGE5Q13069 117 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 GAGE13Q4V321 117 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 AP1S3Q96PC3 154 aa10.34□□□□□ -0.75
SMPDL3A-201ENST00000368440 DNAH10Q8IVF4 4471 aa10.33□□□□□ -0.76
SMPDL3A-201ENST00000368440 SMKR1H3BMG3 65 aa10.33□□□□□ -0.76
SMPDL3A-201ENST00000368440 ZNF56Q15929 161 aa10.33□□□□□ -0.76
SMPDL3A-201ENST00000368440 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
SMPDL3A-201ENST00000368440 ALKBH7Q9BT30 221 aaPredicted RBP10.33□□□□□ -0.76
SMPDL3A-201ENST00000368440 NBDYA0A0U1RRE5 68 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 NCR2O95944 276 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 AKR1D1P51857 326 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 LINC00315P59091 139 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 SMIM15Q7Z3B0 74 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 KRTAP1-5Q9BYS1 174 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 FRAS1Q86XX4 4008 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 D6R8Y8 96 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 MRPL51Q4U2R6 128 aaKnown RBP10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 GATD1Q8NB37 220 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 TMEM191AQ9H0A3 160 aa10.32□□□□□ -0.76
SMPDL3A-201ENST00000368440 SH2D6Q7Z4S9 175 aa10.31□□□□□ -0.76
SMPDL3A-201ENST00000368440 WFDC10BQ8IUB3 73 aa10.31□□□□□ -0.76
SMPDL3A-201ENST00000368440 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
SMPDL3A-201ENST00000368440 SIVA1O15304 175 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 NUPR1O60356 82 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 SERF1AO75920 110 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 SMIM17P0DL12 118 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 C18orf32Q8TCD1 76 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 TRAV26-2A0A0B4J265 109 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 F5H697 171 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 MGPP08493 103 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 RAB4AP20338 218 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 S100A2P29034 98 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 CKS2P33552 79 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
SMPDL3A-201ENST00000368440 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
SMPDL3A-201ENST00000368440 TIRAPP58753 221 aa10.29□□□□□ -0.76
SMPDL3A-201ENST00000368440 NEXN-AS1Q8NBZ9 246 aa10.29□□□□□ -0.76
SMPDL3A-201ENST00000368440 TRBV10-1A0A0K0K1A3 114 aa10.28□□□□□ -0.76
SMPDL3A-201ENST00000368440 IFITM10A6NMD0 228 aa10.28□□□□□ -0.76
SMPDL3A-201ENST00000368440 RTL8CO15255 209 aa10.28□□□□□ -0.76
SMPDL3A-201ENST00000368440 LINC00310P59036 64 aa10.28□□□□□ -0.76
SMPDL3A-201ENST00000368440 Q0VG73 95 aa10.28□□□□□ -0.76
SMPDL3A-201ENST00000368440 OR10J3Q5JRS4 329 aa10.28□□□□□ -0.76
SMPDL3A-201ENST00000368440 PRELID3AQ96N28 172 aa10.28□□□□□ -0.76
SMPDL3A-201ENST00000368440 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
SMPDL3A-201ENST00000368440 EPPK1P58107 5090 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms