RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 PRR27Q6MZM9 219 aa9.75□□□□□ -0.85
CTSD-202ENST00000367196 NEXN-AS1Q8NBZ9 246 aa9.75□□□□□ -0.85
CTSD-202ENST00000367196 AP1S3Q96PC3 154 aa9.75□□□□□ -0.85
CTSD-202ENST00000367196 MANBALQ9NQG1 85 aa9.75□□□□□ -0.85
CTSD-202ENST00000367196 TMUB2Q71RG4 321 aa9.74□□□□□ -0.85
CTSD-202ENST00000367196 DEFB104AQ8WTQ1 72 aa9.74□□□□□ -0.85
CTSD-202ENST00000367196 CHCHD5Q9BSY4 110 aa9.74□□□□□ -0.85
CTSD-202ENST00000367196 SSBP4Q9BWG4 385 aaPredicted RBP9.74□□□□□ -0.85
CTSD-202ENST00000367196 DNAH8Q96JB1 4490 aa9.74□□□□□ -0.85
CTSD-202ENST00000367196 TEX46H3BTG2 121 aa9.73□□□□□ -0.85
CTSD-202ENST00000367196 ANGP03950 147 aaKnown RBP9.73□□□□□ -0.85
CTSD-202ENST00000367196 MIAQ16674 131 aa9.73□□□□□ -0.85
CTSD-202ENST00000367196 H7C1H1 209 aa9.72□□□□□ -0.85
CTSD-202ENST00000367196 RPL35P42766 123 aaKnown RBP9.72□□□□□ -0.85
CTSD-202ENST00000367196 NKX2-5P52952 324 aaPredicted RBP9.72□□□□□ -0.85
CTSD-202ENST00000367196 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
CTSD-202ENST00000367196 SCXQ7RTU7 201 aa9.72□□□□□ -0.85
CTSD-202ENST00000367196 C15orf54Q8N8G6 183 aa9.72□□□□□ -0.85
CTSD-202ENST00000367196 CHAC1Q9BUX1 264 aa9.72□□□□□ -0.85
CTSD-202ENST00000367196 TRBV25-1A0A075B6N4 114 aa9.71□□□□□ -0.86
CTSD-202ENST00000367196 RAB5CP51148 216 aa9.71□□□□□ -0.86
CTSD-202ENST00000367196 RPS20P60866 119 aaKnown RBP9.71□□□□□ -0.86
CTSD-202ENST00000367196 EIF5AL1Q6IS14 154 aaKnown RBP9.71□□□□□ -0.86
CTSD-202ENST00000367196 C11orf52Q96A22 123 aa9.71□□□□□ -0.86
CTSD-202ENST00000367196 DAZAP1Q96EP5 407 aaKnown RBP9.71□□□□□ -0.86
CTSD-202ENST00000367196 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
CTSD-202ENST00000367196 DNAJC30Q96LL9 226 aa9.71□□□□□ -0.86
CTSD-202ENST00000367196 VAX2Q9UIW0 290 aa9.71□□□□□ -0.86
CTSD-202ENST00000367196 XKRY2A2RUG3 117 aa9.7□□□□□ -0.86
CTSD-202ENST00000367196 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
CTSD-202ENST00000367196 C9orf62Q8N4C0 152 aa9.7□□□□□ -0.86
CTSD-202ENST00000367196 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
CTSD-202ENST00000367196 GNG13Q9P2W3 67 aa9.7□□□□□ -0.86
CTSD-202ENST00000367196 MUC21A0A0G2JKD1 596 aa9.69□□□□□ -0.86
CTSD-202ENST00000367196 MUC21A0A140T8X8 626 aa9.69□□□□□ -0.86
CTSD-202ENST00000367196 HLA-DQA1P01909 254 aa9.69□□□□□ -0.86
CTSD-202ENST00000367196 CACNG7P62955 275 aa9.69□□□□□ -0.86
CTSD-202ENST00000367196 CENPWQ5EE01 88 aa9.69□□□□□ -0.86
CTSD-202ENST00000367196 ENHOQ6UWT2 76 aa9.69□□□□□ -0.86
CTSD-202ENST00000367196 TPPP3Q9BW30 176 aa9.69□□□□□ -0.86
CTSD-202ENST00000367196 BIN3Q9NQY0 253 aa9.69□□□□□ -0.86
CTSD-202ENST00000367196 TRAV1-1A0A0B4J248 108 aa9.68□□□□□ -0.86
CTSD-202ENST00000367196 IFNA1P01562 189 aa9.68□□□□□ -0.86
CTSD-202ENST00000367196 SSTP61278 116 aa9.68□□□□□ -0.86
CTSD-202ENST00000367196 FER1L6-AS1Q8NA97 138 aa9.68□□□□□ -0.86
CTSD-202ENST00000367196 IGHV1-24A0A0C4DH33 117 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 F2Z2F3 143 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 PDE6DO43924 150 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 IGLV2-8P01709 118 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 MGPP08493 103 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 GNG4P50150 75 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 OR2D3Q8NGH3 330 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 CIRBP-AS1Q8TBR5 109 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
CTSD-202ENST00000367196 KRTAP29-1A8MX34 341 aaPredicted RBP9.66□□□□□ -0.86
CTSD-202ENST00000367196 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 P01737 135 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 TRGC1P0CF51 173 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 IGLC6P0CF74 106 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 RBX1P62877 108 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 CCL20P78556 96 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 IQCJQ1A5X6 159 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 DGAT2L7PQ6IED9 249 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 PRR34Q9NV39 138 aa9.66□□□□□ -0.86
CTSD-202ENST00000367196 MEF2BQ02080 365 aaPredicted RBP9.65□□□□□ -0.86
CTSD-202ENST00000367196 GAGE6Q13070 117 aa9.65□□□□□ -0.86
CTSD-202ENST00000367196 NTM-AS1Q6ZSK4 140 aa9.65□□□□□ -0.86
CTSD-202ENST00000367196 M0QY20 66 aa9.64□□□□□ -0.87
CTSD-202ENST00000367196 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
CTSD-202ENST00000367196 CLRN3Q8NCR9 226 aa9.64□□□□□ -0.87
CTSD-202ENST00000367196 C19orf71A6NCJ1 209 aa9.63□□□□□ -0.87
CTSD-202ENST00000367196 GZMBP10144 247 aa9.63□□□□□ -0.87
CTSD-202ENST00000367196 TAGLN2P37802 199 aaKnown RBP9.63□□□□□ -0.87
CTSD-202ENST00000367196 SULT1A2P50226 295 aa9.63□□□□□ -0.87
CTSD-202ENST00000367196 SUMO4Q6EEV6 95 aa9.63□□□□□ -0.87
CTSD-202ENST00000367196 RASL11AQ6T310 242 aa9.63□□□□□ -0.87
CTSD-202ENST00000367196 CLPSL2Q6UWE3 100 aa9.63□□□□□ -0.87
CTSD-202ENST00000367196 SLC51BQ86UW2 128 aa9.63□□□□□ -0.87
CTSD-202ENST00000367196 DPH3P1Q9H4G8 78 aa9.63□□□□□ -0.87
CTSD-202ENST00000367196 TRAV8-4A0A0B4J246 113 aa9.62□□□□□ -0.87
CTSD-202ENST00000367196 UBE2L6O14933 153 aa9.62□□□□□ -0.87
CTSD-202ENST00000367196 REG3AQ06141 175 aa9.62□□□□□ -0.87
CTSD-202ENST00000367196 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
CTSD-202ENST00000367196 TMEM243Q9BU79 118 aa9.62□□□□□ -0.87
CTSD-202ENST00000367196 MED9Q9NWA0 146 aa9.62□□□□□ -0.87
CTSD-202ENST00000367196 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
CTSD-202ENST00000367196 PRSS1P07477 247 aa9.61□□□□□ -0.87
CTSD-202ENST00000367196 BCL2P10415 239 aa9.61□□□□□ -0.87
CTSD-202ENST00000367196 C9orf163Q8N9P6 203 aa9.61□□□□□ -0.87
CTSD-202ENST00000367196 NIT2Q9NQR4 276 aa9.61□□□□□ -0.87
CTSD-202ENST00000367196 RAB19A4D1S5 217 aa9.6□□□□□ -0.87
CTSD-202ENST00000367196 OXTP01178 125 aa9.6□□□□□ -0.87
CTSD-202ENST00000367196 WDR73Q6P4I2 378 aa9.6□□□□□ -0.87
CTSD-202ENST00000367196 NTF3P20783 257 aa9.59□□□□□ -0.87
CTSD-202ENST00000367196 RPL37AP61513 92 aaKnown RBP9.59□□□□□ -0.87
CTSD-202ENST00000367196 COTL1Q14019 142 aa9.59□□□□□ -0.87
CTSD-202ENST00000367196 LYZL1Q6UWQ5 148 aa9.59□□□□□ -0.87
CTSD-202ENST00000367196 AP5S1Q9NUS5 200 aa9.59□□□□□ -0.87
CTSD-202ENST00000367196 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.58□□□□□ -0.88
CTSD-202ENST00000367196 CTRLP40313 264 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms