RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 C11orf71Q6IPW1 123 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 DNAH12Q6ZR08 3092 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 NXPH4O95158 308 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 TRBV12-3P01733 135 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 ELANEP08246 267 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 E9PLD3 99 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 PLA2G5P39877 138 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 BRD3OSQ6XYD6 125 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 NDUFA11Q86Y39 141 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 TRAV23DV6A0A075B6W5 121 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 CENPFP49454 3210 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 KLHL30-AS1Q8NEE0 82 aa4.13□□□□□ -1.75
CDC42BPA-204ENST00000366767 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 C20orf197Q8N268 126 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 VSIG2Q96IQ7 327 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 OVOL3O00110 214 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 RUSC1-AS1Q66K80 236 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 HRCT1Q6UXD1 115 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 ZFP2Q6ZN57 461 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 Q8N6K4 173 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 UPK3BQ9BT76 320 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 Q9H8V8 135 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 RHOHQ15669 191 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 FUSP35637 526 aaKnown RBP eCLIP4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 RNASE13Q5GAN3 156 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 COX8CQ7Z4L0 72 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 JMJD7-PLA2G4BH0Y9G9 81 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 PF4P02776 101 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 PIP4P2Q8N4L2 257 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 NDUFS5O43920 106 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 SDIM1Q6ZPB5 146 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 RETNQ9HD89 108 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 SPG11Q96JI7 2443 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 H3BQ85 93 aa4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 GRNP28799 593 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-204ENST00000366767 CSPG4Q6UVK1 2322 aa4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 IGHV3-38A0A0C4DH36 116 aa4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 GATA1P15976 413 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 TEX49A0A1B0GTD5 131 aa4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 IGF1P05019 195 aa4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 IGLV2-11P01706 119 aa4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 TOMM6Q96B49 74 aa4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 COX7B2Q8TF08 81 aa4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 C14orf132Q9NPU4 83 aa4.11□□□□□ -1.75
CDC42BPA-204ENST00000366767 NKAPP1Q8N9T2 125 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 CSDC2Q9Y534 153 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 C11orf86A6NJI1 115 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 ODF1Q14990 250 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 ODF3Q96PU9 254 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 KLK9Q9UKQ9 250 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 IGHV3-16A0A0C4DH30 117 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 COX7CP15954 63 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 ZFP36P26651 326 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 CRIP1P50238 77 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 GPHB5Q86YW7 130 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 TIMM17BO60830 172 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 Q8N976 141 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 MRPS12O15235 138 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 LINC00310P59036 64 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 NREPQ16612 68 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 A6NDX4 124 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 LINC01619G3V211 115 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 XGP55808 180 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 LMO4P61968 165 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 IMUPQ9GZP8 106 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 CREBBPQ92793 2442 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 NAV3Q8IVL0 2385 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 A0A1W2PRX2 142 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
CDC42BPA-204ENST00000366767 ZFAND3Q9H8U3 227 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 LOXL1Q08397 574 aaPredicted RBP4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 ZNRF2Q8NHG8 242 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 VPREB3Q9UKI3 123 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 DEFB105AQ8NG35 78 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 PRAC2D3DTV9 90 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 TM2D2Q9BX73 214 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 CNFNQ9BYD5 112 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 TP73-AS1Q9UF72 201 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 BRI3O95415 125 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 TIMM17AQ99595 171 aa4.09□□□□□ -1.75
CDC42BPA-204ENST00000366767 IGHV4-28A0A0C4DH34 117 aa4.09□□□□□ -1.76
CDC42BPA-204ENST00000366767 ZNF561-AS1K7EIQ3 104 aa4.09□□□□□ -1.76
CDC42BPA-204ENST00000366767 Q6Q795 121 aa4.09□□□□□ -1.76
CDC42BPA-204ENST00000366767 RPL39LQ96EH5 51 aaKnown RBP4.09□□□□□ -1.76
CDC42BPA-204ENST00000366767 MSRB1Q9NZV6 116 aa4.09□□□□□ -1.76
CDC42BPA-204ENST00000366767 SMAD5-AS1Q9Y6J3 95 aa4.09□□□□□ -1.76
CDC42BPA-204ENST00000366767 ZNF80P51504 273 aaPredicted RBP4.09□□□□□ -1.76
CDC42BPA-204ENST00000366767 LECT2O14960 151 aa4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 NDUFC1O43677 76 aa4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 RPL18AQ02543 176 aaKnown RBP4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 IGHV4-4A0A075B6R2 117 aa4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 ATP5EP2Q5VTU8 51 aa4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 IGHV4-61A0A0C4DH41 118 aa4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 CRIP2P52943 208 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 PTPN13Q12923 2485 aa4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 IGKV2-29A2NJV5 120 aaPredicted RBP4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 TMEM256-PLSCR3K7ERE1 68 aa4.08□□□□□ -1.76
CDC42BPA-204ENST00000366767 FAM19A5Q7Z5A7 132 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms