RNA–Protein interactions for RNA: ENST00000363192.1

RNU4-58P-201, Transcript of RNA, U4 small nuclear 58, pseudogene, humanhuman

BASIC

Gene RNU4-58P, Length 141 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-58P-201ENST00000363192 TNFP01375 233 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 PPP1R2P41236 205 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 DEFB123Q8N688 67 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 DEFB105AQ8NG35 78 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 BRK1Q8WUW1 75 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 TAS2R8Q9NYW2 309 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 SS18L2Q9UHA2 77 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 PLB1Q6P1J6 1458 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 DNAH2Q9P225 4427 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 SBF2Q86WG5 1849 aa-1.33□□□□□ -2.62
RNU4-58P-201ENST00000363192 RNF213Q63HN8 5207 aa-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 TRBV7-6A0A0J9YX20 115 aa-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 PPP5D1E7EU14 171 aa-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 SRP9P49458 86 aaKnown RBP-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 BASP1P80723 227 aaKnown RBP-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 MRPS15P82914 257 aaKnown RBP-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 SPCS2Q15005 226 aa-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 CBLN4Q9NTU7 201 aa-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 MED11Q9P086 117 aa-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 ERG28Q9UKR5 140 aa-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 CASKIN1Q8WXD9 1431 aa-1.34□□□□□ -2.62
RNU4-58P-201ENST00000363192 RYR2Q92736 4967 aa-1.35□□□□□ -2.62
RNU4-58P-201ENST00000363192 DMXL1Q9Y485 3027 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 ZCCHC11Q5TAX3 1644 aaKnown RBP-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 LAMA3Q16787 3333 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 PNMA8CA0A1B0GUJ8 204 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 ATG12O94817 140 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 SLC25A5P05141 298 aaKnown RBP-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 S100A6P06703 90 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 S100A11P31949 105 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 S100A3P33764 101 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 CEBPGP53567 150 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 PCBD1P61457 104 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 LSM3P62310 102 aaKnown RBP-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 TPM4P67936 248 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 PLGLB1Q02325 96 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 HSD17B12Q53GQ0 312 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 CROCCP2Q86T23 111 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 DYNLRB2Q8TF09 96 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 GINS3Q9BRX5 216 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 NPVFQ9HCQ7 196 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 METTL1Q9UBP6 276 aaKnown RBP-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 DNAH9Q9NYC9 4486 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 ADCY9O60503 1353 aa-1.35□□□□□ -2.63
RNU4-58P-201ENST00000363192 M0QZK8 103 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 UQCRQO14949 82 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 KDM5CP41229 1560 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 SPA17Q15506 151 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 BAGE3Q86Y29 109 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 NSD3Q9BZ95 1437 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 AGPAT4-IT1Q9H0P7 198 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 VPS13BQ7Z7G8 4022 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 ANKRD11Q6UB99 2663 aaPredicted RBP-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 A0A0C4DFX4 3053 aa-1.36□□□□□ -2.63
RNU4-58P-201ENST00000363192 LRRC37A3O60309 1634 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 UHRF1BP1LA0JNW5 1464 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 LYSTQ99698 3801 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 ADGRB1O14514 1584 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 RPL22P35268 128 aaKnown RBP-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 COTL1Q14019 142 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 TMED2Q15363 201 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 TMEM91Q6ZNR0 172 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 STX19Q8N4C7 294 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 COL4A6Q14031 1691 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 KNL1Q8NG31 2342 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 KALRNO60229 2985 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 TEX15Q9BXT5 2789 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 GAPVD1Q14C86 1478 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 FMN2Q9NZ56 1722 aa-1.37□□□□□ -2.63
RNU4-58P-201ENST00000363192 PAPPA2Q9BXP8 1791 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 CCDC179H3BU77 68 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 UBE2D1P51668 147 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 DHRS4L2Q6PKH6 230 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 HRCT1Q6UXD1 115 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 PHB2Q99623 299 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 SLC35B3Q9H1N7 401 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 ARL2BPQ9Y2Y0 163 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 UFC1Q9Y3C8 167 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 A2MP01023 1474 aa-1.38□□□□□ -2.63
RNU4-58P-201ENST00000363192 AKAP13Q12802 2813 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 FAM92AA1XBS5 289 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 H0YJX3 145 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 IFNA1P01562 189 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 TCRAP04437 139 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 CTXN2P0C2S0 81 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 CDKN2CP42773 168 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 C9orf116Q5BN46 136 aaPredicted RBP-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 SNX29P2Q8IUI4 249 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 OR13C6PQ8NH95 151 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 ATP6V0E2Q8NHE4 81 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 LAMTOR2Q9Y2Q5 125 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 DNAJC15Q9Y5T4 150 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 MYH6P13533 1939 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 ADAMTS12P58397 1594 aa-1.39□□□□□ -2.63
RNU4-58P-201ENST00000363192 ANK3Q12955 4377 aaKnown RBP-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 KIAA0556O60303 1618 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 PTPN23Q9H3S7 1636 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 NWD2Q9ULI1 1742 aa-1.4□□□□□ -2.63
RNU4-58P-201ENST00000363192 PITX3O75364 302 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms