RNA–Protein interactions for RNA: ENST00000362402.1

RNU6-349P-201, Transcript of RNA, U6 small nuclear 349, pseudogene, humanhuman

BASIC

Gene RNU6-349P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-349P-201ENST00000362402 TRMT112Q9UI30 125 aaKnown RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 PCTPQ9UKL6 214 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 TRAPPC2LQ9UL33 140 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 SNX12Q9UMY4 172 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CCL26Q9Y258 94 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 LSM2Q9Y333 95 aaKnown RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 C22orf24Q9Y442 160 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 PHLDA3Q9Y5J5 127 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 SERP1Q9Y6X1 66 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 LY96Q9Y6Y9 160 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 V9GYS6 101 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CREBBPQ92793 2442 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 ANKRD36A6QL64 1941 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 DLG5Q8TDM6 1919 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CEP192Q8TEP8 1941 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 ABCA12Q86UK0 2595 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 SETD2Q9BYW2 2564 aaPredicted RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CHD8Q9HCK8 2581 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 PIK3C2AO00443 1686 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 TET3O43151 1660 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 KIF1AQ12756 1690 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CTTNBP2Q8WZ74 1663 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 ROBO1Q9Y6N7 1651 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 PTPRZ1P23471 2315 aaPredicted RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 ABCC5O15440 1437 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CRB1P82279 1406 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 RIC1Q4ADV7 1423 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 C10orf71Q711Q0 1435 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 SCAPERQ9BY12 1400 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 NSD3Q9BZ95 1437 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CEP350Q5VT06 3117 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 IGF2RP11717 2491 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 NAV2Q8IVL1 2488 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 ECM29Q5VYK3 1845 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 KIAA1549LQ6ZVL6 1849 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 TNCP24821 2201 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 SPEGQ15772 3267 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 FLNBO75369 2602 aaKnown RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 FLNAP21333 2647 aaKnown RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 USP24Q9UPU5 2620 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 EIF4G3O43432 1585 aaKnown RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 DNMBPQ6XZF7 1577 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 SPTBN2O15020 2390 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 TEX15Q9BXT5 2789 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 WDFY4Q6ZS81 3184 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 DSPPQ9NZW4 1301 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CHD1O14646 1710 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 COL4A2P08572 1712 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 WDR90Q96KV7 1748 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 ABCA3Q99758 1704 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 MARF1Q9Y4F3 1742 aaKnown RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 ZNF462Q96JM2 2506 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 LAMA1P25391 3075 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 PXDNLA1KZ92 1463 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 POLA1P09884 1462 aaPredicted RBP0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 PTPRMP28827 1452 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 ERVK-7P63135 1459 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 CAMSAP2Q08AD1 1489 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 GAPVD1Q14C86 1478 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 IQSEC2Q5JU85 1478 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 IFT140Q96RY7 1462 aa0.1□□□□□ -2.39
RNU6-349P-201ENST00000362402 SRCAPQ6ZRS2 3230 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 SPTA1P02549 2419 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 TMEM131LA2VDJ0 1609 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 KDM6BO15054 1643 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 PTPN23Q9H3S7 1636 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 USP9YO00507 2555 aaPredicted RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 ITPR2Q14571 2701 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 RGPD2P0DJD1 1756 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 AKAP12Q02952 1782 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 CACNA1BQ00975 2339 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 CACNA1EQ15878 2313 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 TCHHQ07283 1943 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 KTN1Q86UP2 1357 aaKnown RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 PLIN4Q96Q06 1357 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 MYH4Q9Y623 1939 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 FREM2Q5SZK8 3169 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 IGSF10Q6WRI0 2623 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 ABCC3O15438 1527 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 EPRSP07814 1512 aaKnown RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 HMGXB3Q12766 1538 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 ARHGAP5Q13017 1502 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 CDK13Q14004 1512 aaKnown RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 LMTK2Q8IWU2 1503 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 DLC1Q96QB1 1528 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 ZNF142P52746 1687 aaPredicted RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 CUL7Q14999 1698 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 USP54Q70EL1 1684 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 CACNA1HO95180 2353 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 TPRP12270 2363 aaKnown RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 SPTBN1Q01082 2364 aaKnown RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 LOC400499M0QZD8 3231 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 CENPFP49454 3210 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 SIP14410 1827 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 AFDNP55196 1824 aaKnown RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 DOCK2Q92608 1830 aa0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 TNRC6BQ9UPQ9 1833 aaKnown RBP0.09□□□□□ -2.39
RNU6-349P-201ENST00000362402 IGKV3-7A0A075B6H7 116 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms