RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 PLCE1Q9P212 2302 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 IGHV4-59P01825 116 aa10.26□□□□□ -0.77
CCDC144A-203ENST00000360495 H0Y9J4 135 aa10.25□□□□□ -0.77
CCDC144A-203ENST00000360495 SCXQ7RTU7 201 aa10.25□□□□□ -0.77
CCDC144A-203ENST00000360495 ODF3L1Q8IXM7 274 aa10.25□□□□□ -0.77
CCDC144A-203ENST00000360495 TNRC6BQ9UPQ9 1833 aaKnown RBP10.25□□□□□ -0.77
CCDC144A-203ENST00000360495 ZNF80P51504 273 aaPredicted RBP10.25□□□□□ -0.77
CCDC144A-203ENST00000360495 LY6G6EA0A0G2JKS1 128 aa10.25□□□□□ -0.77
CCDC144A-203ENST00000360495 XGP55808 180 aa10.25□□□□□ -0.77
CCDC144A-203ENST00000360495 U3KQA8 63 aa10.25□□□□□ -0.77
CCDC144A-203ENST00000360495 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 TRBV30A0A0K0K1B3 111 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 IGFL3Q6UXB1 125 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 DKK4Q9UBT3 224 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 DEFB112Q30KQ8 113 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 C1orf195Q5TG92 126 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 PCNX2A6NKB5 2137 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 PLXND1Q9Y4D7 1925 aa10.24□□□□□ -0.77
CCDC144A-203ENST00000360495 VPREB3Q9UKI3 123 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 IGHV4OR15-8A0A075B7B6 117 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 A0A087WW49 117 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 CCL24O00175 119 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 HELZP42694 1942 aaKnown RBP10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 MBD6Q96DN6 1003 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 Q96MF0 132 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 IGKV1D-37A0A075B6S9 117 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 ATP5EP56381 51 aaPredicted RBP10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 LRRC75A-AS1Q8N1F1 130 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 ARHGAP21Q5T5U3 1957 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 VWA8A3KMH1 1905 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 M0QXV9 152 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 SLPIP03973 132 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 Q8N9W7 124 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
CCDC144A-203ENST00000360495 USP17L23D6RBM5 183 aa10.22□□□□□ -0.77
CCDC144A-203ENST00000360495 COX7CP15954 63 aa10.22□□□□□ -0.77
CCDC144A-203ENST00000360495 CFAP126Q5VTH2 177 aa10.22□□□□□ -0.77
CCDC144A-203ENST00000360495 IGKV4-1P06312 121 aa10.22□□□□□ -0.77
CCDC144A-203ENST00000360495 C2orf91Q6ZV80 131 aa10.22□□□□□ -0.77
CCDC144A-203ENST00000360495 PIK3CD-AS1Q5SR53 167 aa10.22□□□□□ -0.77
CCDC144A-203ENST00000360495 HHLA3Q9XRX5 114 aa10.22□□□□□ -0.77
CCDC144A-203ENST00000360495 UBE2AP49459 152 aa10.21□□□□□ -0.77
CCDC144A-203ENST00000360495 TMEM223A0PJW6 202 aa10.21□□□□□ -0.77
CCDC144A-203ENST00000360495 P0C879 139 aa10.21□□□□□ -0.77
CCDC144A-203ENST00000360495 TIMM17BO60830 172 aa10.21□□□□□ -0.78
CCDC144A-203ENST00000360495 BLCAPP62952 87 aa10.21□□□□□ -0.78
CCDC144A-203ENST00000360495 SNURFQ9Y675 71 aa10.21□□□□□ -0.78
CCDC144A-203ENST00000360495 NDUFC1O43677 76 aa10.2□□□□□ -0.78
CCDC144A-203ENST00000360495 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
CCDC144A-203ENST00000360495 LINC00694P0DN24 101 aa10.2□□□□□ -0.78
CCDC144A-203ENST00000360495 NBASA2RRP1 2371 aa10.2□□□□□ -0.78
CCDC144A-203ENST00000360495 RLFQ13129 1914 aa10.2□□□□□ -0.78
CCDC144A-203ENST00000360495 INSL3P51460 131 aa10.2□□□□□ -0.78
CCDC144A-203ENST00000360495 MED13Q9UHV7 2174 aa10.2□□□□□ -0.78
CCDC144A-203ENST00000360495 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
CCDC144A-203ENST00000360495 SP5Q6BEB4 398 aaPredicted RBP10.19□□□□□ -0.78
CCDC144A-203ENST00000360495 K7EMT4 169 aa10.19□□□□□ -0.78
CCDC144A-203ENST00000360495 SPART-AS1P0CW21 52 aa10.19□□□□□ -0.78
CCDC144A-203ENST00000360495 ZNF295-AS1Q8N0V1 137 aa10.19□□□□□ -0.78
CCDC144A-203ENST00000360495 C5orf56Q8N8D9 126 aa10.19□□□□□ -0.78
CCDC144A-203ENST00000360495 ZSWIM8A7E2V4 1837 aa10.19□□□□□ -0.78
CCDC144A-203ENST00000360495 CDKN2A-AS1Q9UH64 79 aa10.18□□□□□ -0.78
CCDC144A-203ENST00000360495 TSC2P49815 1807 aa10.18□□□□□ -0.78
CCDC144A-203ENST00000360495 DSCAML1Q8TD84 2053 aa10.18□□□□□ -0.78
CCDC144A-203ENST00000360495 HRCT1Q6UXD1 115 aa10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 RNF138Q8WVD3 245 aa10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 MED13LQ71F56 2210 aa10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 ZGRF1Q86YA3 2104 aa10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 K7ENP7 123 aa10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 TMEM263Q8WUH6 116 aaKnown RBP10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 IGHV4-38-2P0DP08 117 aa10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 WT1P19544 449 aaPredicted RBP10.17□□□□□ -0.78
CCDC144A-203ENST00000360495 TRBV10-1A0A0K0K1A3 114 aa10.16□□□□□ -0.78
CCDC144A-203ENST00000360495 IGLV1-47P01700 117 aa10.16□□□□□ -0.78
CCDC144A-203ENST00000360495 PLXNA2O75051 1894 aa10.16□□□□□ -0.78
CCDC144A-203ENST00000360495 A0A0J9YX75 114 aa10.16□□□□□ -0.78
CCDC144A-203ENST00000360495 COL4A6Q14031 1691 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 NLRC5Q86WI3 1866 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 IGLV4-3A0A075B6K6 122 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 ZFAND2AQ8N6M9 145 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 C20orf173Q96LM9 149 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 UNQ9165/PRO28630Q6UXU0 137 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 U3KQK5 164 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 A6NED7 52 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 SPRY4Q9C004 299 aa10.15□□□□□ -0.78
CCDC144A-203ENST00000360495 SMIM9A6NGZ8 99 aa10.14□□□□□ -0.79
CCDC144A-203ENST00000360495 GPHB5Q86YW7 130 aa10.14□□□□□ -0.79
CCDC144A-203ENST00000360495 LINC00467Q9BRT7 94 aa10.14□□□□□ -0.79
CCDC144A-203ENST00000360495 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
CCDC144A-203ENST00000360495 FAM19A3Q7Z5A8 133 aa10.13□□□□□ -0.79
CCDC144A-203ENST00000360495 LST1O00453 97 aa10.13□□□□□ -0.79
CCDC144A-203ENST00000360495 BRWD1-AS2P59051 145 aa10.13□□□□□ -0.79
CCDC144A-203ENST00000360495 CCL18P55774 89 aa10.13□□□□□ -0.79
CCDC144A-203ENST00000360495 PCNX1Q96RV3 2341 aa10.13□□□□□ -0.79
CCDC144A-203ENST00000360495 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
CCDC144A-203ENST00000360495 Q6Q795 121 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms