RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 LEPP41159 167 aa10.34□□□□□ -0.75
CSNK1E-201ENST00000359867 DPF1Q92782 380 aa10.34□□□□□ -0.75
CSNK1E-201ENST00000359867 LINC01619G3V211 115 aa10.34□□□□□ -0.75
CSNK1E-201ENST00000359867 PHLDA1Q8WV24 401 aaPredicted RBP10.34□□□□□ -0.75
CSNK1E-201ENST00000359867 RNF185Q96GF1 192 aa10.34□□□□□ -0.75
CSNK1E-201ENST00000359867 CYSLTR1Q9Y271 337 aa10.34□□□□□ -0.75
CSNK1E-201ENST00000359867 K7EQG2 157 aa10.33□□□□□ -0.76
CSNK1E-201ENST00000359867 PRR9Q5T870 116 aa10.33□□□□□ -0.76
CSNK1E-201ENST00000359867 C1QTNF4Q9BXJ3 329 aa10.33□□□□□ -0.76
CSNK1E-201ENST00000359867 CCL24O00175 119 aa10.33□□□□□ -0.76
CSNK1E-201ENST00000359867 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
CSNK1E-201ENST00000359867 PRSS1P07477 247 aa10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 Q6ZUT4 128 aa10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 CITED1Q99966 193 aa10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 MAP1LC3AQ9H492 121 aa10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 F6UB75 175 aa10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 OR9G4Q8NGQ1 327 aa10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 ODF3Q96PU9 254 aa10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 PEMTQ9UBM1 199 aa10.32□□□□□ -0.76
CSNK1E-201ENST00000359867 IGHV4-4A0A075B6R2 117 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 Q6ZQT7 251 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 GTSCR1Q86UQ5 136 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 NDUFA11Q86Y39 141 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 PRO0461Q9UI25 63 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 TRRAPQ9Y4A5 3859 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 NHLRC4P0CG21 123 aaPredicted RBP10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 DEFB1P60022 68 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 TMEM158Q8WZ71 300 aa10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 NHP2Q9NX24 153 aaKnown RBP10.31□□□□□ -0.76
CSNK1E-201ENST00000359867 TRAV26-2A0A0B4J265 109 aa10.3□□□□□ -0.76
CSNK1E-201ENST00000359867 KLLNB2CW77 178 aa10.3□□□□□ -0.76
CSNK1E-201ENST00000359867 E9PLD3 99 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 APOMO95445 188 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 MED14OSP0DP75 135 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 FOXI1Q12951 378 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 GAGE13Q4V321 117 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 PSMG4Q5JS54 123 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 TRAV2A0A0B4J234 112 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 A0A1B0GWB2 263 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 PRSS29PA6NIE9 313 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 ZNF688P0C7X2 276 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 RNASE4P34096 147 aaKnown RBP10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 C3orf56Q8N813 242 aa10.29□□□□□ -0.76
CSNK1E-201ENST00000359867 A0A0J9YX75 114 aa10.28□□□□□ -0.76
CSNK1E-201ENST00000359867 IGLL5B9A064 214 aa10.28□□□□□ -0.76
CSNK1E-201ENST00000359867 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
CSNK1E-201ENST00000359867 CCDC179H3BU77 68 aa10.28□□□□□ -0.76
CSNK1E-201ENST00000359867 SPRY2O43597 315 aa10.28□□□□□ -0.76
CSNK1E-201ENST00000359867 DUSP14O95147 198 aaKnown RBP10.28□□□□□ -0.76
CSNK1E-201ENST00000359867 FCER1GP30273 86 aa10.28□□□□□ -0.76
CSNK1E-201ENST00000359867 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
CSNK1E-201ENST00000359867 ASIPP42127 132 aa10.27□□□□□ -0.76
CSNK1E-201ENST00000359867 PF4P02776 101 aa10.27□□□□□ -0.77
CSNK1E-201ENST00000359867 ZC2HC1BQ5TFG8 222 aa10.27□□□□□ -0.77
CSNK1E-201ENST00000359867 SPATA3Q8NHX4 192 aa10.27□□□□□ -0.77
CSNK1E-201ENST00000359867 CHAC1Q9BUX1 264 aa10.27□□□□□ -0.77
CSNK1E-201ENST00000359867 AGRNO00468 2067 aa10.27□□□□□ -0.77
CSNK1E-201ENST00000359867 IGKCP01834 107 aa10.26□□□□□ -0.77
CSNK1E-201ENST00000359867 SPANXN1Q5VSR9 72 aa10.26□□□□□ -0.77
CSNK1E-201ENST00000359867 MDFIQ99750 246 aa10.26□□□□□ -0.77
CSNK1E-201ENST00000359867 NOTCH3Q9UM47 2321 aa10.25□□□□□ -0.77
CSNK1E-201ENST00000359867 H3BVH4 76 aa10.25□□□□□ -0.77
CSNK1E-201ENST00000359867 S100A4P26447 101 aaKnown RBP10.25□□□□□ -0.77
CSNK1E-201ENST00000359867 TRBV25-1A0A075B6N4 114 aa10.25□□□□□ -0.77
CSNK1E-201ENST00000359867 NXT2Q9NPJ8 142 aaKnown RBP10.25□□□□□ -0.77
CSNK1E-201ENST00000359867 MRPL35Q9NZE8 188 aaKnown RBP10.24□□□□□ -0.77
CSNK1E-201ENST00000359867 SMCPP49901 116 aaPredicted RBP10.24□□□□□ -0.77
CSNK1E-201ENST00000359867 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
CSNK1E-201ENST00000359867 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
CSNK1E-201ENST00000359867 ZMAT4Q9H898 229 aa10.24□□□□□ -0.77
CSNK1E-201ENST00000359867 FAM159AQ6UWV7 190 aa10.23□□□□□ -0.77
CSNK1E-201ENST00000359867 TRBV20-1A0A075B6N2 111 aa10.23□□□□□ -0.77
CSNK1E-201ENST00000359867 A0A087WX48 190 aa10.23□□□□□ -0.77
CSNK1E-201ENST00000359867 DPM2O94777 84 aa10.23□□□□□ -0.77
CSNK1E-201ENST00000359867 LINC00482Q8N8I6 264 aa10.23□□□□□ -0.77
CSNK1E-201ENST00000359867 Q8N8P6 123 aa10.23□□□□□ -0.77
CSNK1E-201ENST00000359867 PPDPFQ9H3Y8 114 aa10.23□□□□□ -0.77
CSNK1E-201ENST00000359867 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
CSNK1E-201ENST00000359867 DYNLRB2Q8TF09 96 aa10.22□□□□□ -0.77
CSNK1E-201ENST00000359867 PTH2Q96A98 100 aa10.22□□□□□ -0.77
CSNK1E-201ENST00000359867 PHLDA3Q9Y5J5 127 aa10.22□□□□□ -0.77
CSNK1E-201ENST00000359867 GNRH2O43555 120 aa10.22□□□□□ -0.77
CSNK1E-201ENST00000359867 RNASE3P12724 160 aaKnown RBP10.22□□□□□ -0.77
CSNK1E-201ENST00000359867 DEFB114Q30KQ6 69 aa10.22□□□□□ -0.77
CSNK1E-201ENST00000359867 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
CSNK1E-201ENST00000359867 LINC01546A6NGU7 62 aa10.21□□□□□ -0.77
CSNK1E-201ENST00000359867 A8MTW9 85 aa10.21□□□□□ -0.77
CSNK1E-201ENST00000359867 M0QXV9 152 aa10.21□□□□□ -0.78
CSNK1E-201ENST00000359867 TMEM61Q8N0U2 210 aa10.21□□□□□ -0.78
CSNK1E-201ENST00000359867 TRAV12-3A0A0B4J271 114 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 TRAV25A0A0B4J276 109 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 NXPH4O95158 308 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 CEND1Q8N111 149 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 NRACQ8N912 160 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 PKD1L1Q8TDX9 2849 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 LAGE3Q14657 143 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
CSNK1E-201ENST00000359867 SORL1Q92673 2214 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms