RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CITED2Q99967 270 aaPredicted RBP9.46□□□□□ -0.89
GGPS1-202ENST00000358966 K7EMT4 169 aa9.46□□□□□ -0.9
GGPS1-202ENST00000358966 CACNG7P62955 275 aa9.46□□□□□ -0.9
GGPS1-202ENST00000358966 C9orf47Q6ZRZ4 202 aa9.46□□□□□ -0.9
GGPS1-202ENST00000358966 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.9
GGPS1-202ENST00000358966 TMEM86BQ8N661 226 aa9.46□□□□□ -0.9
GGPS1-202ENST00000358966 TRAV4A0A0B4J268 109 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 A0A1B0GUT8 65 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 CEND1Q8N111 149 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 PPDPFLQ8WWR9 84 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 GFRA4Q9GZZ7 299 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 AP5S1Q9NUS5 200 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 RBAKDNA6NC62 111 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 EVI2AP22794 236 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 C12orf74Q32Q52 190 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 OR10J6PQ8NGY7 276 aa9.45□□□□□ -0.9
GGPS1-202ENST00000358966 LINC01619G3V211 115 aa9.44□□□□□ -0.9
GGPS1-202ENST00000358966 ZFAND2AQ8N6M9 145 aa9.44□□□□□ -0.9
GGPS1-202ENST00000358966 LINC00694P0DN24 101 aa9.44□□□□□ -0.9
GGPS1-202ENST00000358966 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
GGPS1-202ENST00000358966 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
GGPS1-202ENST00000358966 C4orf3Q8WVX3 66 aa9.44□□□□□ -0.9
GGPS1-202ENST00000358966 TMEM126AQ9H061 195 aa9.44□□□□□ -0.9
GGPS1-202ENST00000358966 RNASE4P34096 147 aaKnown RBP9.43□□□□□ -0.9
GGPS1-202ENST00000358966 LGALS9BQ3B8N2 356 aa9.43□□□□□ -0.9
GGPS1-202ENST00000358966 LGALS9CQ6DKI2 356 aa9.43□□□□□ -0.9
GGPS1-202ENST00000358966 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
GGPS1-202ENST00000358966 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
GGPS1-202ENST00000358966 HIGD1BQ9P298 99 aa9.43□□□□□ -0.9
GGPS1-202ENST00000358966 TRAV12-2A0A075B6T6 113 aa9.43□□□□□ -0.9
GGPS1-202ENST00000358966 CRLF1O75462 422 aa9.43□□□□□ -0.9
GGPS1-202ENST00000358966 SNCGO76070 127 aa9.43□□□□□ -0.9
GGPS1-202ENST00000358966 RNASE1P07998 156 aaKnown RBP9.43□□□□□ -0.9
GGPS1-202ENST00000358966 AMN1Q8IY45 258 aa9.43□□□□□ -0.9
GGPS1-202ENST00000358966 IGKV2D-26A0A0A0MRZ7 120 aa9.42□□□□□ -0.9
GGPS1-202ENST00000358966 TMEM61Q8N0U2 210 aa9.42□□□□□ -0.9
GGPS1-202ENST00000358966 HILS1P60008 231 aa9.42□□□□□ -0.9
GGPS1-202ENST00000358966 TWIST1Q15672 202 aa9.42□□□□□ -0.9
GGPS1-202ENST00000358966 MRPL23Q16540 153 aaKnown RBP9.42□□□□□ -0.9
GGPS1-202ENST00000358966 RASL10AQ92737 203 aa9.42□□□□□ -0.9
GGPS1-202ENST00000358966 SPANXA1Q9NS26 97 aa9.42□□□□□ -0.9
GGPS1-202ENST00000358966 SMKR1H3BMG3 65 aa9.41□□□□□ -0.9
GGPS1-202ENST00000358966 GAS8-AS1O95177 125 aa9.41□□□□□ -0.9
GGPS1-202ENST00000358966 TRBV25-1A0A075B6N4 114 aa9.41□□□□□ -0.9
GGPS1-202ENST00000358966 TMEM262E9PQX1 116 aa9.41□□□□□ -0.9
GGPS1-202ENST00000358966 LGALS9O00182 355 aa9.41□□□□□ -0.9
GGPS1-202ENST00000358966 IGLC6P0CF74 106 aa9.41□□□□□ -0.9
GGPS1-202ENST00000358966 FXYD7P58549 80 aa9.41□□□□□ -0.9
GGPS1-202ENST00000358966 TEN1Q86WV5 123 aa9.41□□□□□ -0.9
GGPS1-202ENST00000358966 H3BVH4 76 aa9.4□□□□□ -0.9
GGPS1-202ENST00000358966 K7EQG2 157 aa9.4□□□□□ -0.9
GGPS1-202ENST00000358966 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
GGPS1-202ENST00000358966 KNCNA6PVL3 124 aa9.4□□□□□ -0.9
GGPS1-202ENST00000358966 OVOL1O14753 267 aa9.4□□□□□ -0.9
GGPS1-202ENST00000358966 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
GGPS1-202ENST00000358966 MUC4Q99102 2169 aa9.4□□□□□ -0.9
GGPS1-202ENST00000358966 A0A096LNJ9 63 aa9.4□□□□□ -0.91
GGPS1-202ENST00000358966 RIGQ13278 110 aa9.4□□□□□ -0.91
GGPS1-202ENST00000358966 NSUN5P1Q3KNT7 163 aa9.4□□□□□ -0.91
GGPS1-202ENST00000358966 PRSS3P2Q8NHM4 247 aa9.4□□□□□ -0.91
GGPS1-202ENST00000358966 GNRH2O43555 120 aa9.39□□□□□ -0.91
GGPS1-202ENST00000358966 SPINK13Q1W4C9 94 aa9.39□□□□□ -0.91
GGPS1-202ENST00000358966 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
GGPS1-202ENST00000358966 DKK2Q9UBU2 259 aa9.39□□□□□ -0.91
GGPS1-202ENST00000358966 NBEAL2Q6ZNJ1 2754 aa9.39□□□□□ -0.91
GGPS1-202ENST00000358966 TRAV12-3A0A0B4J271 114 aa9.39□□□□□ -0.91
GGPS1-202ENST00000358966 CCL24O00175 119 aa9.39□□□□□ -0.91
GGPS1-202ENST00000358966 LINC01587Q99440 93 aa9.39□□□□□ -0.91
GGPS1-202ENST00000358966 PRM2P04554 102 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 DEFB131AP59861 70 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 SNRPD3P62318 126 aaKnown RBP9.38□□□□□ -0.91
GGPS1-202ENST00000358966 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 D6R8Y8 96 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 PSMB2P49721 201 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 KRTAP10-3P60369 221 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 SFTA2Q6UW10 78 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 DYNLRB2Q8TF09 96 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 FAM19A4Q96LR4 140 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 MDFICQ9P1T7 246 aa9.38□□□□□ -0.91
GGPS1-202ENST00000358966 GATA1P15976 413 aaPredicted RBP9.37□□□□□ -0.91
GGPS1-202ENST00000358966 FCER1GP30273 86 aa9.37□□□□□ -0.91
GGPS1-202ENST00000358966 A0A0J9YX75 114 aa9.37□□□□□ -0.91
GGPS1-202ENST00000358966 LOC389332A0A1B0GUA5 103 aa9.37□□□□□ -0.91
GGPS1-202ENST00000358966 TRAV26-2A0A0B4J265 109 aa9.36□□□□□ -0.91
GGPS1-202ENST00000358966 M0R381 172 aa9.36□□□□□ -0.91
GGPS1-202ENST00000358966 STAB1Q9NY15 2570 aa9.36□□□□□ -0.91
GGPS1-202ENST00000358966 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
GGPS1-202ENST00000358966 MORN3Q6PF18 240 aaPredicted RBP9.36□□□□□ -0.91
GGPS1-202ENST00000358966 FBN1P35555 2871 aaKnown RBP9.36□□□□□ -0.91
GGPS1-202ENST00000358966 F5H768 121 aa9.35□□□□□ -0.91
GGPS1-202ENST00000358966 MRPL51Q4U2R6 128 aaKnown RBP9.35□□□□□ -0.91
GGPS1-202ENST00000358966 Q6Q795 121 aa9.35□□□□□ -0.91
GGPS1-202ENST00000358966 PEMTQ9UBM1 199 aa9.35□□□□□ -0.91
GGPS1-202ENST00000358966 TRAV21A0A0B4J279 112 aa9.35□□□□□ -0.91
GGPS1-202ENST00000358966 C9JAW5 83 aa9.35□□□□□ -0.91
GGPS1-202ENST00000358966 HTN1P15515 57 aa9.35□□□□□ -0.91
GGPS1-202ENST00000358966 DEFB114Q30KQ6 69 aa9.35□□□□□ -0.91
GGPS1-202ENST00000358966 FAM104BQ5XKR9 115 aa9.35□□□□□ -0.91
GGPS1-202ENST00000358966 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
GGPS1-202ENST00000358966 PROK1P58294 105 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms