RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 CT83Q5H943 113 aa12.66□□□□□ -0.38
VPS72-201ENST00000354473 SUMO4Q6EEV6 95 aa12.66□□□□□ -0.38
VPS72-201ENST00000354473 SPATA12Q7Z6I5 190 aa12.66□□□□□ -0.38
VPS72-201ENST00000354473 Q9HAA7 133 aa12.66□□□□□ -0.38
VPS72-201ENST00000354473 PKD1P98161 4303 aa12.66□□□□□ -0.38
VPS72-201ENST00000354473 FAM74A3Q4VXF1 159 aa12.65□□□□□ -0.38
VPS72-201ENST00000354473 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.65□□□□□ -0.38
VPS72-201ENST00000354473 C16orf90A8MZG2 172 aa12.64□□□□□ -0.39
VPS72-201ENST00000354473 H7C1H1 209 aa12.64□□□□□ -0.39
VPS72-201ENST00000354473 TMEM241Q24JQ0 296 aa12.64□□□□□ -0.39
VPS72-201ENST00000354473 NIT1Q86X76 327 aa12.64□□□□□ -0.39
VPS72-201ENST00000354473 PGLYRP4Q96LB8 373 aa12.64□□□□□ -0.39
VPS72-201ENST00000354473 URGCP-MRPS24S4R325 110 aa12.64□□□□□ -0.39
VPS72-201ENST00000354473 LAGE3Q14657 143 aa12.63□□□□□ -0.39
VPS72-201ENST00000354473 DAZ4Q86SG3 579 aaKnown RBP12.63□□□□□ -0.39
VPS72-201ENST00000354473 DAZ3Q9NR90 486 aaKnown RBP12.63□□□□□ -0.39
VPS72-201ENST00000354473 OSTCQ9NRP0 149 aa12.63□□□□□ -0.39
VPS72-201ENST00000354473 TRBV6-8A0A0A6YYG3 113 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 KRTAP10-2P60368 255 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 C15orf54Q8N8G6 183 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 DNAJC30Q96LL9 226 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 SMDT1Q9H4I9 107 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 EREGO14944 169 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 PSCAO43653 123 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 RPL23P62829 140 aaKnown RBP12.62□□□□□ -0.39
VPS72-201ENST00000354473 ADIRFQ15847 76 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 RASL11AQ6T310 242 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 TSKUQ8WUA8 353 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 ISOC2Q96AB3 205 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 NAT8Q9UHE5 227 aa12.62□□□□□ -0.39
VPS72-201ENST00000354473 A0A087WTM6 91 aa12.61□□□□□ -0.39
VPS72-201ENST00000354473 A0A087WX48 190 aa12.61□□□□□ -0.39
VPS72-201ENST00000354473 HIGD1CA8MV81 97 aa12.61□□□□□ -0.39
VPS72-201ENST00000354473 SMIM15Q7Z3B0 74 aa12.61□□□□□ -0.39
VPS72-201ENST00000354473 BORCS7Q96B45 105 aa12.61□□□□□ -0.39
VPS72-201ENST00000354473 GFRA4Q9GZZ7 299 aa12.61□□□□□ -0.39
VPS72-201ENST00000354473 FOXA3P55318 350 aaPredicted RBP12.6□□□□□ -0.39
VPS72-201ENST00000354473 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
VPS72-201ENST00000354473 V9GYV3 84 aa12.6□□□□□ -0.39
VPS72-201ENST00000354473 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
VPS72-201ENST00000354473 RAB14P61106 215 aa12.59□□□□□ -0.39
VPS72-201ENST00000354473 TMEM97Q5BJF2 176 aa12.59□□□□□ -0.39
VPS72-201ENST00000354473 NTM-AS1Q6ZSK4 140 aa12.59□□□□□ -0.39
VPS72-201ENST00000354473 CHCHD5Q9BSY4 110 aa12.59□□□□□ -0.39
VPS72-201ENST00000354473 CHCHD7Q9BUK0 85 aa12.59□□□□□ -0.39
VPS72-201ENST00000354473 NIT2Q9NQR4 276 aa12.59□□□□□ -0.39
VPS72-201ENST00000354473 TRAV8-3A0A0A6YYJ7 113 aa12.58□□□□□ -0.4
VPS72-201ENST00000354473 FAM231BA6NCW3 169 aa12.58□□□□□ -0.4
VPS72-201ENST00000354473 TMEM262E9PQX1 116 aa12.58□□□□□ -0.4
VPS72-201ENST00000354473 KLK12Q9UKR0 248 aa12.58□□□□□ -0.4
VPS72-201ENST00000354473 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
VPS72-201ENST00000354473 GATD1Q8NB37 220 aa12.57□□□□□ -0.4
VPS72-201ENST00000354473 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
VPS72-201ENST00000354473 TRBV25-1A0A075B6N4 114 aa12.56□□□□□ -0.4
VPS72-201ENST00000354473 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS72-201ENST00000354473 MPV17L2Q567V2 206 aa12.56□□□□□ -0.4
VPS72-201ENST00000354473 IGHV1-24A0A0C4DH33 117 aa12.55□□□□□ -0.4
VPS72-201ENST00000354473 PKIAP61925 76 aa12.55□□□□□ -0.4
VPS72-201ENST00000354473 ELOBQ15370 118 aa12.55□□□□□ -0.4
VPS72-201ENST00000354473 LRCOL1A6NCL2 159 aa12.54□□□□□ -0.4
VPS72-201ENST00000354473 IQCJQ1A5X6 159 aa12.54□□□□□ -0.4
VPS72-201ENST00000354473 NUP35Q8NFH5 326 aa12.54□□□□□ -0.4
VPS72-201ENST00000354473 FRZBQ92765 325 aa12.54□□□□□ -0.4
VPS72-201ENST00000354473 UBE2WQ96B02 151 aa12.54□□□□□ -0.4
VPS72-201ENST00000354473 PGPEP1Q9NXJ5 209 aa12.54□□□□□ -0.4
VPS72-201ENST00000354473 GAGE6Q13070 117 aa12.53□□□□□ -0.4
VPS72-201ENST00000354473 DEFB104AQ8WTQ1 72 aa12.53□□□□□ -0.4
VPS72-201ENST00000354473 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
VPS72-201ENST00000354473 NAT8BQ9UHF3 227 aa12.53□□□□□ -0.4
VPS72-201ENST00000354473 KIAA1109Q2LD37 5005 aa12.53□□□□□ -0.4
VPS72-201ENST00000354473 ANGP03950 147 aaKnown RBP12.52□□□□□ -0.41
VPS72-201ENST00000354473 RIGQ13278 110 aa12.52□□□□□ -0.41
VPS72-201ENST00000354473 CDPF1Q6NVV7 123 aa12.52□□□□□ -0.41
VPS72-201ENST00000354473 Q8N976 141 aa12.52□□□□□ -0.41
VPS72-201ENST00000354473 RMI2Q96E14 147 aa12.52□□□□□ -0.41
VPS72-201ENST00000354473 TMEM191AQ9H0A3 160 aa12.52□□□□□ -0.41
VPS72-201ENST00000354473 DNAH11Q96DT5 4516 aa12.52□□□□□ -0.41
VPS72-201ENST00000354473 IGKV2D-24A0A075B6R9 120 aa12.51□□□□□ -0.41
VPS72-201ENST00000354473 ATRAIDQ6UW56 229 aa12.51□□□□□ -0.41
VPS72-201ENST00000354473 TMEM243Q9BU79 118 aa12.51□□□□□ -0.41
VPS72-201ENST00000354473 SMIM27A0A1W2PRY6 76 aa12.5□□□□□ -0.41
VPS72-201ENST00000354473 CRPP02741 224 aa12.5□□□□□ -0.41
VPS72-201ENST00000354473 RBX1P62877 108 aa12.5□□□□□ -0.41
VPS72-201ENST00000354473 COTL1Q14019 142 aa12.5□□□□□ -0.41
VPS72-201ENST00000354473 CLLU1Q5K131 121 aa12.5□□□□□ -0.41
VPS72-201ENST00000354473 COX11Q9Y6N1 276 aa12.5□□□□□ -0.41
VPS72-201ENST00000354473 Q0VG73 95 aa12.49□□□□□ -0.41
VPS72-201ENST00000354473 ENHOQ6UWT2 76 aa12.49□□□□□ -0.41
VPS72-201ENST00000354473 DYNC1H1Q14204 4646 aaKnown RBP12.49□□□□□ -0.41
VPS72-201ENST00000354473 CDK2AP2O75956 126 aa12.48□□□□□ -0.41
VPS72-201ENST00000354473 AMTP48728 403 aa12.48□□□□□ -0.41
VPS72-201ENST00000354473 IFITM2Q01629 132 aa12.48□□□□□ -0.41
VPS72-201ENST00000354473 WFDC2Q14508 124 aa12.48□□□□□ -0.41
VPS72-201ENST00000354473 AMN1Q8IY45 258 aa12.48□□□□□ -0.41
VPS72-201ENST00000354473 Q8N814 137 aa12.48□□□□□ -0.41
VPS72-201ENST00000354473 MAPKAPK5-AS1Q8N8E1 139 aa12.48□□□□□ -0.41
VPS72-201ENST00000354473 RNF185Q96GF1 192 aa12.48□□□□□ -0.41
VPS72-201ENST00000354473 SDHAF1A6NFY7 115 aa12.47□□□□□ -0.41
VPS72-201ENST00000354473 LECT2O14960 151 aa12.47□□□□□ -0.41
VPS72-201ENST00000354473 GAS8-AS1O95177 125 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms