RNA–Protein interactions for RNA: ENST00000350092.8

PTBP1-202, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-202ENST00000350092 UCNP55089 124 aa11.73□□□□□ -0.53
PTBP1-202ENST00000350092 ZNF56Q15929 161 aa11.73□□□□□ -0.53
PTBP1-202ENST00000350092 TMEM95Q3KNT9 176 aa11.73□□□□□ -0.53
PTBP1-202ENST00000350092 Q8N1Y9 231 aa11.73□□□□□ -0.53
PTBP1-202ENST00000350092 CITED1Q99966 193 aa11.73□□□□□ -0.53
PTBP1-202ENST00000350092 LITAFQ99732 161 aa11.73□□□□□ -0.53
PTBP1-202ENST00000350092 ZNF580Q9UK33 172 aa11.73□□□□□ -0.53
PTBP1-202ENST00000350092 SHISA2Q6UWI4 295 aa11.72□□□□□ -0.53
PTBP1-202ENST00000350092 RAX2Q96IS3 184 aa11.72□□□□□ -0.53
PTBP1-202ENST00000350092 ERG28Q9UKR5 140 aa11.72□□□□□ -0.53
PTBP1-202ENST00000350092 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
PTBP1-202ENST00000350092 TRAV12-2A0A075B6T6 113 aa11.71□□□□□ -0.53
PTBP1-202ENST00000350092 IGHV4-61A0A0C4DH41 118 aa11.71□□□□□ -0.53
PTBP1-202ENST00000350092 C19orf84I3L1E1 186 aa11.71□□□□□ -0.53
PTBP1-202ENST00000350092 SCGB1C2P0DMR2 95 aa11.71□□□□□ -0.53
PTBP1-202ENST00000350092 EDA2RQ9HAV5 297 aa11.71□□□□□ -0.53
PTBP1-202ENST00000350092 TRAV2A0A0B4J234 112 aa11.71□□□□□ -0.54
PTBP1-202ENST00000350092 A0A0J9YXV3 536 aa11.71□□□□□ -0.54
PTBP1-202ENST00000350092 A0A0J9YXY3 114 aa11.71□□□□□ -0.54
PTBP1-202ENST00000350092 RNF152Q8N8N0 203 aa11.71□□□□□ -0.54
PTBP1-202ENST00000350092 C9JAW5 83 aa11.7□□□□□ -0.54
PTBP1-202ENST00000350092 I3L3M4 83 aa11.7□□□□□ -0.54
PTBP1-202ENST00000350092 SS18L2Q9UHA2 77 aa11.7□□□□□ -0.54
PTBP1-202ENST00000350092 IGHV1OR15-1A0A075B7D0 117 aa11.7□□□□□ -0.54
PTBP1-202ENST00000350092 IGHV3-64A0A075B6Q5 118 aa11.69□□□□□ -0.54
PTBP1-202ENST00000350092 TMEM262E9PQX1 116 aa11.68□□□□□ -0.54
PTBP1-202ENST00000350092 K7EQG2 157 aa11.68□□□□□ -0.54
PTBP1-202ENST00000350092 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.68□□□□□ -0.54
PTBP1-202ENST00000350092 PSMB8P28062 276 aa11.68□□□□□ -0.54
PTBP1-202ENST00000350092 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
PTBP1-202ENST00000350092 TRBV30A0A0K0K1B3 111 aa11.67□□□□□ -0.54
PTBP1-202ENST00000350092 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
PTBP1-202ENST00000350092 RNF183Q96D59 192 aa11.67□□□□□ -0.54
PTBP1-202ENST00000350092 MRPS36P82909 103 aaKnown RBP11.67□□□□□ -0.54
PTBP1-202ENST00000350092 LINC01620Q4KN68 170 aa11.67□□□□□ -0.54
PTBP1-202ENST00000350092 RPL13AP40429 203 aaKnown RBP11.66□□□□□ -0.54
PTBP1-202ENST00000350092 ATXN8Q156A1 80 aa11.66□□□□□ -0.54
PTBP1-202ENST00000350092 C10orf105Q8TEF2 133 aa11.66□□□□□ -0.54
PTBP1-202ENST00000350092 TRIAP1O43715 76 aa11.66□□□□□ -0.54
PTBP1-202ENST00000350092 IGKV3-20P01619 116 aa11.66□□□□□ -0.54
PTBP1-202ENST00000350092 SPINK13Q1W4C9 94 aa11.66□□□□□ -0.54
PTBP1-202ENST00000350092 PIMREGQ9BSJ6 248 aa11.66□□□□□ -0.54
PTBP1-202ENST00000350092 RBMY1A1P0DJD3 496 aaKnown RBP11.65□□□□□ -0.54
PTBP1-202ENST00000350092 RBMY1CP0DJD4 496 aa11.65□□□□□ -0.54
PTBP1-202ENST00000350092 RBMY1FQ15415 496 aaKnown RBP11.65□□□□□ -0.54
PTBP1-202ENST00000350092 SPANXDQ9BXN6 97 aa11.65□□□□□ -0.54
PTBP1-202ENST00000350092 SPANXCQ9NY87 97 aa11.65□□□□□ -0.54
PTBP1-202ENST00000350092 SPTA1P02549 2419 aa11.65□□□□□ -0.54
PTBP1-202ENST00000350092 NACAE9PAV3 2078 aa11.64□□□□□ -0.55
PTBP1-202ENST00000350092 H7C2G1 150 aa11.64□□□□□ -0.55
PTBP1-202ENST00000350092 GATA3P23771 443 aa11.64□□□□□ -0.55
PTBP1-202ENST00000350092 NTN5Q8WTR8 489 aaPredicted RBP11.64□□□□□ -0.55
PTBP1-202ENST00000350092 ADAMTSL4-AS1Q5T5F5 129 aa11.63□□□□□ -0.55
PTBP1-202ENST00000350092 ZFAND6Q6FIF0 208 aa11.63□□□□□ -0.55
PTBP1-202ENST00000350092 TIMM21Q9BVV7 248 aa11.63□□□□□ -0.55
PTBP1-202ENST00000350092 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
PTBP1-202ENST00000350092 NHLRC4P0CG21 123 aaPredicted RBP11.63□□□□□ -0.55
PTBP1-202ENST00000350092 SNRPD3P62318 126 aaKnown RBP11.63□□□□□ -0.55
PTBP1-202ENST00000350092 C10orf99Q6UWK7 81 aa11.63□□□□□ -0.55
PTBP1-202ENST00000350092 HIVEP3Q5T1R4 2406 aa11.63□□□□□ -0.55
PTBP1-202ENST00000350092 ADARB2-AS1A8MUL3 147 aa11.62□□□□□ -0.55
PTBP1-202ENST00000350092 TRGV11A0A075B6L2 103 aa11.62□□□□□ -0.55
PTBP1-202ENST00000350092 TRAV8-3A0A0A6YYJ7 113 aa11.62□□□□□ -0.55
PTBP1-202ENST00000350092 CD28P10747 220 aa11.62□□□□□ -0.55
PTBP1-202ENST00000350092 SPXQ9BT56 116 aa11.62□□□□□ -0.55
PTBP1-202ENST00000350092 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
PTBP1-202ENST00000350092 CRLF1O75462 422 aa11.61□□□□□ -0.55
PTBP1-202ENST00000350092 AVPP01185 164 aa11.61□□□□□ -0.55
PTBP1-202ENST00000350092 HERV-K104P63124 156 aa11.61□□□□□ -0.55
PTBP1-202ENST00000350092 ATRXP46100 2492 aa11.61□□□□□ -0.55
PTBP1-202ENST00000350092 PROK1P58294 105 aa11.61□□□□□ -0.55
PTBP1-202ENST00000350092 CEMP1Q6PRD7 247 aaPredicted RBP11.61□□□□□ -0.55
PTBP1-202ENST00000350092 MIAQ16674 131 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 TEX29Q8N6K0 151 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 ANAPC13Q9BS18 74 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 ICOSQ9Y6W8 199 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 TEX49A0A1B0GTD5 131 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 TINCRA0A1B0GVN0 87 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 TMEM89A2RUT3 159 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 Q1RN00 199 aa11.6□□□□□ -0.55
PTBP1-202ENST00000350092 VSIG2Q96IQ7 327 aa11.59□□□□□ -0.55
PTBP1-202ENST00000350092 PRRC2AP48634 2157 aaKnown RBP11.59□□□□□ -0.55
PTBP1-202ENST00000350092 IGHV4-30-2A0A087WSY4 118 aa11.59□□□□□ -0.55
PTBP1-202ENST00000350092 TRAV4A0A0B4J268 109 aa11.59□□□□□ -0.55
PTBP1-202ENST00000350092 A8MTW9 85 aa11.59□□□□□ -0.55
PTBP1-202ENST00000350092 MSMBP08118 114 aa11.59□□□□□ -0.55
PTBP1-202ENST00000350092 H7C423 109 aa11.58□□□□□ -0.56
PTBP1-202ENST00000350092 UBE2D4Q9Y2X8 147 aa11.58□□□□□ -0.56
PTBP1-202ENST00000350092 Q6Q795 121 aa11.58□□□□□ -0.56
PTBP1-202ENST00000350092 Q9UF83 564 aa11.58□□□□□ -0.56
PTBP1-202ENST00000350092 NDUFA12Q9UI09 145 aa11.58□□□□□ -0.56
PTBP1-202ENST00000350092 NBASA2RRP1 2371 aa11.57□□□□□ -0.56
PTBP1-202ENST00000350092 RNASE13Q5GAN3 156 aaKnown RBP11.57□□□□□ -0.56
PTBP1-202ENST00000350092 A8MZ25 164 aa11.57□□□□□ -0.56
PTBP1-202ENST00000350092 H3BMM0 161 aa11.57□□□□□ -0.56
PTBP1-202ENST00000350092 Q6ZSN1 163 aa11.57□□□□□ -0.56
PTBP1-202ENST00000350092 Q6ZSV7 163 aa11.57□□□□□ -0.56
PTBP1-202ENST00000350092 UBE2WQ96B02 151 aa11.57□□□□□ -0.56
PTBP1-202ENST00000350092 BEX4Q9NWD9 120 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms