RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 RPL36ALQ969Q0 106 aaKnown RBP9.61□□□□□ -0.87
HMGN3-202ENST00000344726 DAZAP1Q96EP5 407 aaKnown RBP9.6□□□□□ -0.87
HMGN3-202ENST00000344726 DNAJC30Q96LL9 226 aa9.6□□□□□ -0.87
HMGN3-202ENST00000344726 TPPP3Q9BW30 176 aa9.6□□□□□ -0.87
HMGN3-202ENST00000344726 K7EN84 100 aa9.59□□□□□ -0.87
HMGN3-202ENST00000344726 P01737 135 aa9.59□□□□□ -0.87
HMGN3-202ENST00000344726 TAGLN2P37802 199 aaKnown RBP9.59□□□□□ -0.87
HMGN3-202ENST00000344726 RPS20P60866 119 aaKnown RBP9.59□□□□□ -0.87
HMGN3-202ENST00000344726 WFDC2Q14508 124 aa9.59□□□□□ -0.87
HMGN3-202ENST00000344726 LYPD6BQ8NI32 183 aa9.59□□□□□ -0.87
HMGN3-202ENST00000344726 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
HMGN3-202ENST00000344726 F5H697 171 aa9.58□□□□□ -0.88
HMGN3-202ENST00000344726 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
HMGN3-202ENST00000344726 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
HMGN3-202ENST00000344726 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
HMGN3-202ENST00000344726 VPS13BQ7Z7G8 4022 aa9.57□□□□□ -0.88
HMGN3-202ENST00000344726 TRBV6-8A0A0A6YYG3 113 aa9.57□□□□□ -0.88
HMGN3-202ENST00000344726 BLOC1S1P78537 153 aa9.57□□□□□ -0.88
HMGN3-202ENST00000344726 LYZL1Q6UWQ5 148 aa9.57□□□□□ -0.88
HMGN3-202ENST00000344726 Q8N814 137 aa9.57□□□□□ -0.88
HMGN3-202ENST00000344726 RNASE7Q9H1E1 156 aaKnown RBP9.57□□□□□ -0.88
HMGN3-202ENST00000344726 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
HMGN3-202ENST00000344726 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
HMGN3-202ENST00000344726 CACNG7P62955 275 aa9.56□□□□□ -0.88
HMGN3-202ENST00000344726 HAMPP81172 84 aa9.56□□□□□ -0.88
HMGN3-202ENST00000344726 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
HMGN3-202ENST00000344726 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
HMGN3-202ENST00000344726 KLK12Q9UKR0 248 aa9.56□□□□□ -0.88
HMGN3-202ENST00000344726 URGCP-MRPS24S4R325 110 aa9.56□□□□□ -0.88
HMGN3-202ENST00000344726 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
HMGN3-202ENST00000344726 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
HMGN3-202ENST00000344726 M0QY20 66 aa9.55□□□□□ -0.88
HMGN3-202ENST00000344726 MGPP08493 103 aa9.55□□□□□ -0.88
HMGN3-202ENST00000344726 GCSHP23434 173 aa9.55□□□□□ -0.88
HMGN3-202ENST00000344726 SUMO4Q6EEV6 95 aa9.55□□□□□ -0.88
HMGN3-202ENST00000344726 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
HMGN3-202ENST00000344726 A0A087WX48 190 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 IGLV5-52A0A0A0MRZ9 124 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 F2Z2F3 143 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 LECT2O14960 151 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 NTF3P20783 257 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 CTRLP40313 264 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 TOR2AQ5JU69 321 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 MRPL18Q9H0U6 180 aaKnown RBP9.54□□□□□ -0.88
HMGN3-202ENST00000344726 RPP21Q9H633 154 aaKnown RBP9.54□□□□□ -0.88
HMGN3-202ENST00000344726 HERC1Q15751 4861 aa9.54□□□□□ -0.88
HMGN3-202ENST00000344726 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
HMGN3-202ENST00000344726 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
HMGN3-202ENST00000344726 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
HMGN3-202ENST00000344726 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
HMGN3-202ENST00000344726 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
HMGN3-202ENST00000344726 GTSF1Q8WW33 167 aa9.52□□□□□ -0.89
HMGN3-202ENST00000344726 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
HMGN3-202ENST00000344726 IGKV2D-24A0A075B6R9 120 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 TRGC1P0CF51 173 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 CEBPGP53567 150 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 ATRAIDQ6UW56 229 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 ENHOQ6UWT2 76 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 DPH3P1Q9H4G8 78 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 FAM30AQ9NZY2 134 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
HMGN3-202ENST00000344726 SMR3BP02814 79 aaPredicted RBP9.5□□□□□ -0.89
HMGN3-202ENST00000344726 ELOBQ15370 118 aa9.5□□□□□ -0.89
HMGN3-202ENST00000344726 TWIST1Q15672 202 aa9.5□□□□□ -0.89
HMGN3-202ENST00000344726 Q5VSD8 79 aa9.5□□□□□ -0.89
HMGN3-202ENST00000344726 KCNIP4Q6PIL6 250 aa9.5□□□□□ -0.89
HMGN3-202ENST00000344726 C15orf54Q8N8G6 183 aa9.5□□□□□ -0.89
HMGN3-202ENST00000344726 Q8N976 141 aa9.5□□□□□ -0.89
HMGN3-202ENST00000344726 FAM210AQ96ND0 272 aa9.5□□□□□ -0.89
HMGN3-202ENST00000344726 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
HMGN3-202ENST00000344726 COX11Q9Y6N1 276 aa9.5□□□□□ -0.89
HMGN3-202ENST00000344726 H7C1H1 209 aa9.49□□□□□ -0.89
HMGN3-202ENST00000344726 GATCO43716 136 aaKnown RBP9.49□□□□□ -0.89
HMGN3-202ENST00000344726 TMEM97Q5BJF2 176 aa9.49□□□□□ -0.89
HMGN3-202ENST00000344726 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
HMGN3-202ENST00000344726 FAM231DQ6ZW35 169 aa9.49□□□□□ -0.89
HMGN3-202ENST00000344726 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
HMGN3-202ENST00000344726 RMI2Q96E14 147 aa9.49□□□□□ -0.89
HMGN3-202ENST00000344726 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
HMGN3-202ENST00000344726 ANGP03950 147 aaKnown RBP9.48□□□□□ -0.89
HMGN3-202ENST00000344726 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
HMGN3-202ENST00000344726 FOXA3P55318 350 aaPredicted RBP9.48□□□□□ -0.89
HMGN3-202ENST00000344726 GAGE6Q13070 117 aa9.48□□□□□ -0.89
HMGN3-202ENST00000344726 IQCJQ1A5X6 159 aa9.48□□□□□ -0.89
HMGN3-202ENST00000344726 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
HMGN3-202ENST00000344726 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
HMGN3-202ENST00000344726 NIT2Q9NQR4 276 aa9.48□□□□□ -0.89
HMGN3-202ENST00000344726 SRRM2Q9UQ35 2752 aaKnown RBP9.48□□□□□ -0.89
HMGN3-202ENST00000344726 TRBV25-1A0A075B6N4 114 aa9.47□□□□□ -0.89
HMGN3-202ENST00000344726 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
HMGN3-202ENST00000344726 NDUFS6O75380 124 aaKnown RBP9.47□□□□□ -0.89
HMGN3-202ENST00000344726 RBX1P62877 108 aa9.47□□□□□ -0.89
HMGN3-202ENST00000344726 Q0VG73 95 aa9.47□□□□□ -0.89
HMGN3-202ENST00000344726 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
HMGN3-202ENST00000344726 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
HMGN3-202ENST00000344726 TMEM70Q9BUB7 260 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms