RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 TMEM183BQ1AE95 376 aa7.19□□□□□ -1.26
TPM3-207ENST00000341372 SFRP2Q96HF1 295 aa7.19□□□□□ -1.26
TPM3-207ENST00000341372 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
TPM3-207ENST00000341372 SPINK4O60575 86 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 MUC4Q99102 2169 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 TRBV6-1A0A0K0K1D8 114 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 PHOX2AO14813 284 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 HTN3P15516 51 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 GNG4P50150 75 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 Q6ZTI0 123 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 Q86TA4 180 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 V9GYV3 84 aa7.18□□□□□ -1.26
TPM3-207ENST00000341372 TRBV24-1A0A075B6N3 115 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 OXTP01178 125 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 LGALS9BQ3B8N2 356 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 MUC21Q5SSG8 566 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 PRNTQ86SH4 94 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 RNASE7Q9H1E1 156 aaKnown RBP7.17□□□□□ -1.26
TPM3-207ENST00000341372 LTAP01374 205 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 ZNF80P51504 273 aaPredicted RBP7.17□□□□□ -1.26
TPM3-207ENST00000341372 BAGE2Q86Y30 109 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 C15orf53Q8NAA6 179 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 OR10G8Q8NGN5 311 aa7.17□□□□□ -1.26
TPM3-207ENST00000341372 F5H768 121 aa7.16□□□□□ -1.26
TPM3-207ENST00000341372 ZFP82Q8N141 532 aa7.16□□□□□ -1.26
TPM3-207ENST00000341372 FMC1Q96HJ9 113 aa7.16□□□□□ -1.26
TPM3-207ENST00000341372 MDFICQ9P1T7 246 aa7.16□□□□□ -1.26
TPM3-207ENST00000341372 IGHV3-16A0A0C4DH30 117 aa7.15□□□□□ -1.26
TPM3-207ENST00000341372 TYMSP04818 313 aa7.15□□□□□ -1.26
TPM3-207ENST00000341372 P0DMU3 169 aa7.15□□□□□ -1.26
TPM3-207ENST00000341372 FAM231AP0DMU4 169 aa7.15□□□□□ -1.26
TPM3-207ENST00000341372 FAM231CP0DMU5 169 aa7.15□□□□□ -1.26
TPM3-207ENST00000341372 TMEM183AQ8IXX5 376 aa7.15□□□□□ -1.26
TPM3-207ENST00000341372 KCNS1Q96KK3 526 aa7.15□□□□□ -1.26
TPM3-207ENST00000341372 OSTCQ9NRP0 149 aa7.15□□□□□ -1.26
TPM3-207ENST00000341372 TRGV1A0A0A0MS02 117 aa7.15□□□□□ -1.27
TPM3-207ENST00000341372 HOXA5P20719 270 aa7.15□□□□□ -1.27
TPM3-207ENST00000341372 PRSS3P2Q8NHM4 247 aa7.15□□□□□ -1.27
TPM3-207ENST00000341372 RASL10AQ92737 203 aa7.15□□□□□ -1.27
TPM3-207ENST00000341372 IMMP2LQ96T52 175 aa7.15□□□□□ -1.27
TPM3-207ENST00000341372 ZFP30Q9Y2G7 519 aa7.15□□□□□ -1.27
TPM3-207ENST00000341372 C19orf71A6NCJ1 209 aa7.14□□□□□ -1.27
TPM3-207ENST00000341372 H3BNG1 76 aa7.14□□□□□ -1.27
TPM3-207ENST00000341372 RPS10P46783 165 aaKnown RBP7.14□□□□□ -1.27
TPM3-207ENST00000341372 MRPL16Q9NX20 251 aaKnown RBP7.14□□□□□ -1.27
TPM3-207ENST00000341372 IL36BQ9NZH7 164 aa7.14□□□□□ -1.27
TPM3-207ENST00000341372 NACAE9PAV3 2078 aa7.14□□□□□ -1.27
TPM3-207ENST00000341372 DNAH10Q8IVF4 4471 aa7.14□□□□□ -1.27
TPM3-207ENST00000341372 TRGV2A0A075B6R0 118 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 GNRH2O43555 120 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 TRGC2P03986 189 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 MGST1P10620 155 aaKnown RBP7.13□□□□□ -1.27
TPM3-207ENST00000341372 CRIP1P50238 77 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 ERVFC1-1P60608 527 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 UBE2G1P62253 170 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 POM121L12Q8N7R1 296 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 SMIM12Q96EX1 92 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 ZC2HC1AQ96GY0 325 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 C9orf85Q96MD7 179 aa7.13□□□□□ -1.27
TPM3-207ENST00000341372 IGKV3D-20A0A0C4DH25 116 aa7.12□□□□□ -1.27
TPM3-207ENST00000341372 SMIM27A0A1W2PRY6 76 aa7.12□□□□□ -1.27
TPM3-207ENST00000341372 FABP5P3A8MUU1 101 aa7.12□□□□□ -1.27
TPM3-207ENST00000341372 M0R2P5 195 aa7.12□□□□□ -1.27
TPM3-207ENST00000341372 ZNF575Q86XF7 245 aa7.12□□□□□ -1.27
TPM3-207ENST00000341372 C1orf196B1AJZ1 125 aa7.11□□□□□ -1.27
TPM3-207ENST00000341372 FRZBQ92765 325 aa7.11□□□□□ -1.27
TPM3-207ENST00000341372 PTH2Q96A98 100 aa7.11□□□□□ -1.27
TPM3-207ENST00000341372 RNASE3P12724 160 aaKnown RBP7.11□□□□□ -1.27
TPM3-207ENST00000341372 DNLZQ5SXM8 178 aa7.11□□□□□ -1.27
TPM3-207ENST00000341372 VSIG2Q96IQ7 327 aa7.11□□□□□ -1.27
TPM3-207ENST00000341372 PPDPFQ9H3Y8 114 aa7.11□□□□□ -1.27
TPM3-207ENST00000341372 SH2D1AO60880 128 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 S100PP25815 95 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 FHL2Q14192 279 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 MTURNQ8N3F0 131 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 TRAV4A0A0B4J268 109 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BKO60814 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BJP06899 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BOP23527 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BBP33778 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BDP58876 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 RAB5BP61020 215 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BCP62807 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST2H2BEQ16778 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.1□□□□□ -1.27
TPM3-207ENST00000341372 FAM162BQ5T6X4 162 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 GTSF1Q8WW33 167 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BHQ93079 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BNQ99877 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 HIST1H2BMQ99879 126 aa7.1□□□□□ -1.27
TPM3-207ENST00000341372 A0A0J9YY99 117 aa7.09□□□□□ -1.27
TPM3-207ENST00000341372 GATCO43716 136 aaKnown RBP7.09□□□□□ -1.27
TPM3-207ENST00000341372 NUDT3O95989 172 aa7.09□□□□□ -1.27
TPM3-207ENST00000341372 TRGC1P0CF51 173 aa7.09□□□□□ -1.27
TPM3-207ENST00000341372 UBE2DNLQ8IWF7 75 aa7.09□□□□□ -1.27
TPM3-207ENST00000341372 PRO0255Q9UI72 69 aa7.09□□□□□ -1.27
TPM3-207ENST00000341372 A0A096LPF7 62 aa7.08□□□□□ -1.28
TPM3-207ENST00000341372 IGHV3-53P01767 116 aa7.08□□□□□ -1.28
TPM3-207ENST00000341372 CRYBA4P53673 196 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms