RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 MAPK1IP1LQ8NDC0 245 aa8.73□□□□□ -1.01
ZNF648-201ENST00000339948 IGKV3OR2-268A0A0C4DH90 116 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 C10orf99Q6UWK7 81 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 C2orf82Q6UX34 121 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 CLEC2BQ92478 149 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 PRRC2AP48634 2157 aaKnown RBP8.72□□□□□ -1.01
ZNF648-201ENST00000339948 MTORP42345 2549 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 PROK1P58294 105 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 DGAT2L7PQ6IED9 249 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 Q8N6K4 173 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 MOB4Q9Y3A3 225 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 TRAV4A0A0B4J268 109 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 IGHV4-38-2P0DP08 117 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 C5orf56Q8N8D9 126 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 ITPR1Q14643 2758 aa8.72□□□□□ -1.01
ZNF648-201ENST00000339948 NOTCH2Q04721 2471 aa8.71□□□□□ -1.01
ZNF648-201ENST00000339948 BSNQ9UPA5 3926 aa8.71□□□□□ -1.01
ZNF648-201ENST00000339948 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.01
ZNF648-201ENST00000339948 ELANEP08246 267 aa8.71□□□□□ -1.01
ZNF648-201ENST00000339948 COX8CQ7Z4L0 72 aa8.71□□□□□ -1.01
ZNF648-201ENST00000339948 ZANQ9Y493 2812 aa8.71□□□□□ -1.01
ZNF648-201ENST00000339948 IGLV4-69A0A075B6H9 119 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 AJUBAQ96IF1 538 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 SIRPDQ9H106 197 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 RS1O15537 224 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 CRLF1O75462 422 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 IGHV3-30P01768 117 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 ID1P41134 155 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 ADORA2A-AS1P86434 159 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 CITED1Q99966 193 aa8.71□□□□□ -1.02
ZNF648-201ENST00000339948 UBE2D1P51668 147 aa8.7□□□□□ -1.02
ZNF648-201ENST00000339948 IGF2-ASQ6U949 168 aa8.7□□□□□ -1.02
ZNF648-201ENST00000339948 GPHB5Q86YW7 130 aa8.7□□□□□ -1.02
ZNF648-201ENST00000339948 SYNJ2BPP57105 145 aa8.7□□□□□ -1.02
ZNF648-201ENST00000339948 SRSF2Q01130 221 aaKnown RBP8.7□□□□□ -1.02
ZNF648-201ENST00000339948 PAPPA-AS1Q5QFB9 102 aa8.7□□□□□ -1.02
ZNF648-201ENST00000339948 Q8N1Y9 231 aa8.7□□□□□ -1.02
ZNF648-201ENST00000339948 C15orf53Q8NAA6 179 aa8.7□□□□□ -1.02
ZNF648-201ENST00000339948 PSMG3-AS1Q96PY0 264 aa8.7□□□□□ -1.02
ZNF648-201ENST00000339948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.69□□□□□ -1.02
ZNF648-201ENST00000339948 IGKV2-29A2NJV5 120 aaPredicted RBP8.69□□□□□ -1.02
ZNF648-201ENST00000339948 OOSP1A8MZH6 123 aa8.69□□□□□ -1.02
ZNF648-201ENST00000339948 PPP1R17O96001 155 aa8.69□□□□□ -1.02
ZNF648-201ENST00000339948 TIMM21Q9BVV7 248 aa8.69□□□□□ -1.02
ZNF648-201ENST00000339948 PKD1L2Q7Z442 2459 aa8.69□□□□□ -1.02
ZNF648-201ENST00000339948 TCTEX1D4Q5JR98 221 aa8.69□□□□□ -1.02
ZNF648-201ENST00000339948 HERV-K104P63124 156 aa8.68□□□□□ -1.02
ZNF648-201ENST00000339948 SMIM20Q8N5G0 67 aa8.68□□□□□ -1.02
ZNF648-201ENST00000339948 SLC25A29Q8N8R3 303 aa8.68□□□□□ -1.02
ZNF648-201ENST00000339948 DAZ1Q9NQZ3 744 aaKnown RBP8.68□□□□□ -1.02
ZNF648-201ENST00000339948 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
ZNF648-201ENST00000339948 TMEM190Q8WZ59 177 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 TMEM262E9PQX1 116 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 CCDC179H3BU77 68 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 COX6CP09669 75 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 COX6B1P14854 86 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 ATXN8Q156A1 80 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 IGIPA6NJ69 53 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 M0R2P5 195 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
ZNF648-201ENST00000339948 IGHV3-53P01767 116 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 IGHV3-33P01772 117 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 UBE2D3P61077 147 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 UBE2D2P62837 147 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 C11orf44Q8N8P7 122 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 Q9UF83 564 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 NDUFA4O00483 81 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 SNRPD3P62318 126 aaKnown RBP8.66□□□□□ -1.02
ZNF648-201ENST00000339948 CSMD2Q7Z408 3487 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 LINC01546A6NGU7 62 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 H3BMM0 161 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 EBI3Q14213 229 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 ITLN2Q8WWU7 325 aaPredicted RBP8.66□□□□□ -1.02
ZNF648-201ENST00000339948 UBE2WQ96B02 151 aa8.66□□□□□ -1.02
ZNF648-201ENST00000339948 FLNCQ14315 2725 aa8.65□□□□□ -1.02
ZNF648-201ENST00000339948 TRIAP1O43715 76 aa8.65□□□□□ -1.02
ZNF648-201ENST00000339948 GAGE5Q13069 117 aa8.65□□□□□ -1.02
ZNF648-201ENST00000339948 GAGE6Q13070 117 aa8.65□□□□□ -1.02
ZNF648-201ENST00000339948 DEFB136Q30KP8 78 aa8.65□□□□□ -1.02
ZNF648-201ENST00000339948 K7ENP7 123 aa8.65□□□□□ -1.02
ZNF648-201ENST00000339948 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.02
ZNF648-201ENST00000339948 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
ZNF648-201ENST00000339948 MRPL53Q96EL3 112 aaKnown RBP8.65□□□□□ -1.02
ZNF648-201ENST00000339948 TMEM141Q96I45 108 aa8.65□□□□□ -1.02
ZNF648-201ENST00000339948 IGHV4-4A0A075B6R2 117 aa8.65□□□□□ -1.03
ZNF648-201ENST00000339948 IGHV4-61A0A0C4DH41 118 aa8.65□□□□□ -1.03
ZNF648-201ENST00000339948 FAM223BA6NKX1 122 aa8.65□□□□□ -1.03
ZNF648-201ENST00000339948 RNF223E7ERA6 249 aa8.65□□□□□ -1.03
ZNF648-201ENST00000339948 IGHV3-30-3P0DP02 117 aa8.65□□□□□ -1.03
ZNF648-201ENST00000339948 RPL13AP40429 203 aaKnown RBP8.65□□□□□ -1.03
ZNF648-201ENST00000339948 FAM223AQ8IWN6 122 aa8.65□□□□□ -1.03
ZNF648-201ENST00000339948 NRGNQ92686 78 aa8.65□□□□□ -1.03
ZNF648-201ENST00000339948 HIVEP2P31629 2446 aa8.64□□□□□ -1.03
ZNF648-201ENST00000339948 TRAV13-1A0A0B4J241 112 aa8.64□□□□□ -1.03
ZNF648-201ENST00000339948 RHODO00212 210 aa8.64□□□□□ -1.03
ZNF648-201ENST00000339948 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
ZNF648-201ENST00000339948 ATP5J2P56134 94 aa8.64□□□□□ -1.03
ZNF648-201ENST00000339948 LMO4P61968 165 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms