RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TEX261Q6UWH6 196 aa10.21□□□□□ -0.77
PRKN-201ENST00000338468 DAZ4Q86SG3 579 aaKnown RBP10.21□□□□□ -0.77
PRKN-201ENST00000338468 NIT1Q86X76 327 aa10.21□□□□□ -0.77
PRKN-201ENST00000338468 GTSF1Q8WW33 167 aa10.21□□□□□ -0.77
PRKN-201ENST00000338468 CNFNQ9BYD5 112 aa10.21□□□□□ -0.77
PRKN-201ENST00000338468 DAZ3Q9NR90 486 aaKnown RBP10.21□□□□□ -0.77
PRKN-201ENST00000338468 HERC1Q15751 4861 aa10.21□□□□□ -0.78
PRKN-201ENST00000338468 M0QY20 66 aa10.2□□□□□ -0.78
PRKN-201ENST00000338468 SMIM17P0DL12 118 aa10.2□□□□□ -0.78
PRKN-201ENST00000338468 NTF3P20783 257 aa10.2□□□□□ -0.78
PRKN-201ENST00000338468 ERVFC1-1P60608 527 aa10.2□□□□□ -0.78
PRKN-201ENST00000338468 WDR73Q6P4I2 378 aa10.2□□□□□ -0.78
PRKN-201ENST00000338468 FAM231DQ6ZW35 169 aa10.2□□□□□ -0.78
PRKN-201ENST00000338468 Q9HAA7 133 aa10.2□□□□□ -0.78
PRKN-201ENST00000338468 C9JQL5 133 aa10.19□□□□□ -0.78
PRKN-201ENST00000338468 MGPP08493 103 aa10.19□□□□□ -0.78
PRKN-201ENST00000338468 LAGE3Q14657 143 aa10.19□□□□□ -0.78
PRKN-201ENST00000338468 SUMO4Q6EEV6 95 aa10.19□□□□□ -0.78
PRKN-201ENST00000338468 SMIM7Q9BQ49 75 aa10.19□□□□□ -0.78
PRKN-201ENST00000338468 DMBT1Q9UGM3 2413 aaPredicted RBP10.18□□□□□ -0.78
PRKN-201ENST00000338468 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
PRKN-201ENST00000338468 LRCOL1A6NCL2 159 aa10.18□□□□□ -0.78
PRKN-201ENST00000338468 NTM-AS1Q6ZSK4 140 aa10.18□□□□□ -0.78
PRKN-201ENST00000338468 LINC01551Q86U37 167 aa10.18□□□□□ -0.78
PRKN-201ENST00000338468 ZNF727A8MUV8 499 aa10.17□□□□□ -0.78
PRKN-201ENST00000338468 GATCO43716 136 aaKnown RBP10.17□□□□□ -0.78
PRKN-201ENST00000338468 SRSF3P84103 164 aaKnown RBP10.17□□□□□ -0.78
PRKN-201ENST00000338468 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
PRKN-201ENST00000338468 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
PRKN-201ENST00000338468 TWIST1Q15672 202 aa10.16□□□□□ -0.78
PRKN-201ENST00000338468 DPH3P1Q9H4G8 78 aa10.16□□□□□ -0.78
PRKN-201ENST00000338468 EREGO14944 169 aa10.15□□□□□ -0.78
PRKN-201ENST00000338468 FOXA3P55318 350 aaPredicted RBP10.15□□□□□ -0.78
PRKN-201ENST00000338468 CT83Q5H943 113 aa10.15□□□□□ -0.78
PRKN-201ENST00000338468 PGPEP1Q9NXJ5 209 aa10.15□□□□□ -0.78
PRKN-201ENST00000338468 A8MWL6 223 aa10.14□□□□□ -0.79
PRKN-201ENST00000338468 PSCAO43653 123 aa10.14□□□□□ -0.79
PRKN-201ENST00000338468 RASL11AQ6T310 242 aa10.14□□□□□ -0.79
PRKN-201ENST00000338468 PGLYRP4Q96LB8 373 aa10.14□□□□□ -0.79
PRKN-201ENST00000338468 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
PRKN-201ENST00000338468 KLK12Q9UKR0 248 aa10.14□□□□□ -0.79
PRKN-201ENST00000338468 TRAV8-3A0A0A6YYJ7 113 aa10.13□□□□□ -0.79
PRKN-201ENST00000338468 H7C1H1 209 aa10.13□□□□□ -0.79
PRKN-201ENST00000338468 WFDC2Q14508 124 aa10.13□□□□□ -0.79
PRKN-201ENST00000338468 CDPF1Q6NVV7 123 aa10.13□□□□□ -0.79
PRKN-201ENST00000338468 OSTCQ9NRP0 149 aa10.13□□□□□ -0.79
PRKN-201ENST00000338468 URGCP-MRPS24S4R325 110 aa10.13□□□□□ -0.79
PRKN-201ENST00000338468 A0A087WX48 190 aa10.12□□□□□ -0.79
PRKN-201ENST00000338468 MPV17L2Q567V2 206 aa10.12□□□□□ -0.79
PRKN-201ENST00000338468 GATD1Q8NB37 220 aa10.12□□□□□ -0.79
PRKN-201ENST00000338468 ISOC2Q96AB3 205 aa10.12□□□□□ -0.79
PRKN-201ENST00000338468 TM2D2Q9BX73 214 aa10.12□□□□□ -0.79
PRKN-201ENST00000338468 NIT2Q9NQR4 276 aa10.12□□□□□ -0.79
PRKN-201ENST00000338468 V9GYV3 84 aa10.12□□□□□ -0.79
PRKN-201ENST00000338468 DNAH8Q96JB1 4490 aa10.12□□□□□ -0.79
PRKN-201ENST00000338468 TRAV26-2A0A0B4J265 109 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 EPM2AB3EWF7 344 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 TMEM262E9PQX1 116 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 RPL23P62829 140 aaKnown RBP10.11□□□□□ -0.79
PRKN-201ENST00000338468 IQCJQ1A5X6 159 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 TMEM241Q24JQ0 296 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 FAM74A3Q4VXF1 159 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 TMEM97Q5BJF2 176 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 TSKUQ8WUA8 353 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 CHCHD5Q9BSY4 110 aa10.11□□□□□ -0.79
PRKN-201ENST00000338468 HIGD1CA8MV81 97 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 KRTAP10-1P60331 282 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 PEA15Q15121 130 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 ATRAIDQ6UW56 229 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 ENHOQ6UWT2 76 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 Q8N814 137 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 Q8N976 141 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.1□□□□□ -0.79
PRKN-201ENST00000338468 UBE2WQ96B02 151 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 GFRA4Q9GZZ7 299 aa10.1□□□□□ -0.79
PRKN-201ENST00000338468 DEFB104AQ8WTQ1 72 aa10.09□□□□□ -0.79
PRKN-201ENST00000338468 SMDT1Q9H4I9 107 aa10.09□□□□□ -0.79
PRKN-201ENST00000338468 TRBV25-1A0A075B6N4 114 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 IGHV1-24A0A0C4DH33 117 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 FAM231BA6NCW3 169 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 RBX1P62877 108 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 GAGE6Q13070 117 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 ELOBQ15370 118 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 KCNIP4Q6PIL6 250 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 C15orf54Q8N8G6 183 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 RPL39LQ96EH5 51 aaKnown RBP10.08□□□□□ -0.8
PRKN-201ENST00000338468 NAT8Q9UHE5 227 aa10.08□□□□□ -0.8
PRKN-201ENST00000338468 IGKV2D-24A0A075B6R9 120 aa10.07□□□□□ -0.8
PRKN-201ENST00000338468 A0A1B0GUT8 65 aa10.07□□□□□ -0.8
PRKN-201ENST00000338468 LECT2O14960 151 aa10.07□□□□□ -0.8
PRKN-201ENST00000338468 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
PRKN-201ENST00000338468 ADIRFQ15847 76 aa10.07□□□□□ -0.8
PRKN-201ENST00000338468 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
PRKN-201ENST00000338468 FRZBQ92765 325 aa10.07□□□□□ -0.8
PRKN-201ENST00000338468 ANGP03950 147 aaKnown RBP10.06□□□□□ -0.8
PRKN-201ENST00000338468 INAFM2P0DMQ5 153 aa10.06□□□□□ -0.8
PRKN-201ENST00000338468 PKIAP61925 76 aa10.06□□□□□ -0.8
PRKN-201ENST00000338468 SMIM15Q7Z3B0 74 aa10.06□□□□□ -0.8
PRKN-201ENST00000338468 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
PRKN-201ENST00000338468 NTN5Q8WTR8 489 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms