RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 IGHV3-66A0A0C4DH42 116 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 F6UB75 175 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 H3BNG1 76 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 GAS8-AS1O95177 125 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 ZNF415Q09FC8 603 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 SUMO4Q6EEV6 95 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 LINC01600Q96MT4 127 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 DNAH9Q9NYC9 4486 aa3.84□□□□□ -1.79
PRPF4B-201ENST00000337659 TRAV26-2A0A0B4J265 109 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 SMIM17P0DL12 118 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 SUMO2P61956 95 aaKnown RBP3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 Q1RN00 199 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 LINC00173Q6ZV60 143 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 OR5A1Q8NGJ0 315 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 C11orf68Q9H3H3 251 aaKnown RBP3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 IGHV3OR16-12A0A075B7B8 117 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 LAGE3Q14657 143 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 RNF183Q96D59 192 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 SMR3AQ99954 134 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 X6R8D5 127 aa3.84□□□□□ -1.8
PRPF4B-201ENST00000337659 IGLV4-69A0A075B6H9 119 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 A0A087WX48 190 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 A0A1B0GWB2 263 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 GNRH2O43555 120 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 TWIST1Q15672 202 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 CHCHD7Q9BUK0 85 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 C1orf43Q9BWL3 253 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 C1QTNF4Q9BXJ3 329 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 TRRAPQ9Y4A5 3859 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 TRBV6-4A0A1B0GX49 114 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 P0DMU3 169 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 FAM231AP0DMU4 169 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 FAM231CP0DMU5 169 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 HTN3P15516 51 aa3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 GATA1P15976 413 aaPredicted RBP3.83□□□□□ -1.8
PRPF4B-201ENST00000337659 M0QXV9 152 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 DDTP30046 118 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 FAM159AQ6UWV7 190 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 BAGE3Q86Y29 109 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 NIT2Q9NQR4 276 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 H3BVH4 76 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 ORM1P02763 201 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 COX8AP10176 69 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 VAMP3Q15836 100 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 ZNF876PQ49A33 203 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 C2orf91Q6ZV80 131 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 GOLT1BQ9Y3E0 138 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 IGHV3-35A0A0C4DH35 117 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 DEFB136Q30KP8 78 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 ERASQ7Z444 233 aa3.82□□□□□ -1.8
PRPF4B-201ENST00000337659 VCYO14598 125 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 ZNF688P0C7X2 276 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 DEFB131AP59861 70 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 KIAA1644Q3SXP7 199 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 IGHV3OR16-8A0A075B7F1 116 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 C11orf86A6NJI1 115 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 OR11H12B2RN74 326 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 M0R2Z0 102 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 LEPROTL1O95214 131 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 CKS2P33552 79 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 SAMD5Q5TGI4 173 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 LOC100131303A0A0U1RQF7 123 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 PLNP26678 52 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 AMTP48728 403 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 UBE2D3P61077 147 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 UBE2D2P62837 147 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 TAL2Q16559 108 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 DUX5Q96PT3 197 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 FLNAP21333 2647 aaKnown RBP3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 ZANQ9Y493 2812 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 LYRM9A8MSI8 78 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 CAMPP49913 170 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 MAP1LC3CQ9BXW4 147 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 SPANXA1Q9NS26 97 aa3.81□□□□□ -1.8
PRPF4B-201ENST00000337659 IGHV3-49A0A0A0MS15 119 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 H7C1H1 209 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 RRN3P1Q2M238 152 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 C3orf56Q8N813 242 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 Q8NAQ8 132 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 C20orf203Q8NBC4 194 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 TEX48A0A1B0GUV7 120 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 SNRPCP09234 159 aaKnown RBP3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 DEFB1P60022 68 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 COTL1Q14019 142 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 BAALCQ8WXS3 180 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 IFI27L1Q96BM0 104 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 VPS25Q9BRG1 176 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 KNCNA6PVL3 124 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 HSBP1O75506 76 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 IGLL1P15814 213 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 SAMD10Q9BYL1 202 aa3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 SPANXB1Q9NS25 103 aaPredicted RBP3.8□□□□□ -1.8
PRPF4B-201ENST00000337659 I3L3M4 83 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 TMEM97Q5BJF2 176 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 PAPPA-AS1Q5QFB9 102 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 UQCR10Q9UDW1 63 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 TP73-AS1Q9UF72 201 aa3.79□□□□□ -1.8
PRPF4B-201ENST00000337659 TRAV12-3A0A0B4J271 114 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms