RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 RBAKDNA6NC62 111 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 ASIPP42127 132 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 DAND5Q8N907 189 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 RAB1BQ9H0U4 201 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 H3BMM0 161 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 GNLYP22749 145 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 HIST2H2BDQ6DRA6 164 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 TMEM263Q8WUH6 116 aaKnown RBP8.36□□□□□ -1.07
CCDC87-201ENST00000333861 UBE2WQ96B02 151 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 UBTD1Q9HAC8 227 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
CCDC87-201ENST00000333861 TRAV12-2A0A075B6T6 113 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 FAM236AA0A1B0GUQ0 79 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 FAM236BA0A1B0GV22 79 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 ADORA2A-AS1P86434 159 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 CCDC140Q96MF4 163 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 USP9XQ93008 2570 aaPredicted RBP8.35□□□□□ -1.07
CCDC87-201ENST00000333861 TRGV11A0A075B6L2 103 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 RS1O15537 224 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 ZFP36P26651 326 aaKnown RBP8.35□□□□□ -1.07
CCDC87-201ENST00000333861 VMO1Q7Z5L0 202 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 OR10J6PQ8NGY7 276 aa8.35□□□□□ -1.07
CCDC87-201ENST00000333861 LRRK2Q5S007 2527 aa8.34□□□□□ -1.07
CCDC87-201ENST00000333861 AMELXQ99217 191 aa8.34□□□□□ -1.07
CCDC87-201ENST00000333861 SLC50A1Q9BRV3 221 aa8.34□□□□□ -1.07
CCDC87-201ENST00000333861 AKAP9Q99996 3911 aa8.34□□□□□ -1.07
CCDC87-201ENST00000333861 TRAV12-3A0A0B4J271 114 aa8.34□□□□□ -1.07
CCDC87-201ENST00000333861 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
CCDC87-201ENST00000333861 LGALS9O00182 355 aa8.33□□□□□ -1.08
CCDC87-201ENST00000333861 ATXN8Q156A1 80 aa8.33□□□□□ -1.08
CCDC87-201ENST00000333861 LINC01587Q99440 93 aa8.33□□□□□ -1.08
CCDC87-201ENST00000333861 H7C423 109 aa8.33□□□□□ -1.08
CCDC87-201ENST00000333861 UBE2E1P51965 193 aa8.33□□□□□ -1.08
CCDC87-201ENST00000333861 CHD6Q8TD26 2715 aa8.33□□□□□ -1.08
CCDC87-201ENST00000333861 TRAV8-3A0A0A6YYJ7 113 aa8.33□□□□□ -1.08
CCDC87-201ENST00000333861 PRRC2AP48634 2157 aaKnown RBP8.33□□□□□ -1.08
CCDC87-201ENST00000333861 PMVKQ15126 192 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 LY6EQ16553 131 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 GPHB5Q86YW7 130 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 C8orf31Q8N9H6 132 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 SPXQ9BT56 116 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 DPH3P1Q9H4G8 78 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 KAAG1Q9UBP8 84 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 Q9UF83 564 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 POLQO75417 2590 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 P0DMU3 169 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
CCDC87-201ENST00000333861 BBC3Q96PG8 261 aaPredicted RBP8.32□□□□□ -1.08
CCDC87-201ENST00000333861 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
CCDC87-201ENST00000333861 DUX5Q96PT3 197 aa8.31□□□□□ -1.08
CCDC87-201ENST00000333861 NIPBLQ6KC79 2804 aaeCLIP8.31□□□□□ -1.08
CCDC87-201ENST00000333861 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
CCDC87-201ENST00000333861 CD3EP07766 207 aa8.31□□□□□ -1.08
CCDC87-201ENST00000333861 C9orf47Q6ZRZ4 202 aa8.31□□□□□ -1.08
CCDC87-201ENST00000333861 Q8N9W7 124 aa8.31□□□□□ -1.08
CCDC87-201ENST00000333861 KLK9Q9UKQ9 250 aa8.31□□□□□ -1.08
CCDC87-201ENST00000333861 TRAV41A0A0B4J266 112 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 A0A0J9YXV3 536 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 SRSF2Q01130 221 aaKnown RBP8.3□□□□□ -1.08
CCDC87-201ENST00000333861 BRD3OSQ6XYD6 125 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 ZNF625Q96I27 306 aaPredicted RBP8.3□□□□□ -1.08
CCDC87-201ENST00000333861 MDFICQ9P1T7 246 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 WNK1Q9H4A3 2382 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 PROK1P58294 105 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 FBN2P35556 2912 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 C9orf153Q5TBE3 101 aa8.3□□□□□ -1.08
CCDC87-201ENST00000333861 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
CCDC87-201ENST00000333861 KNCNA6PVL3 124 aa8.29□□□□□ -1.08
CCDC87-201ENST00000333861 RNASE3P12724 160 aaKnown RBP8.29□□□□□ -1.08
CCDC87-201ENST00000333861 SUMO4Q6EEV6 95 aa8.29□□□□□ -1.08
CCDC87-201ENST00000333861 ZFAND2AQ8N6M9 145 aa8.29□□□□□ -1.08
CCDC87-201ENST00000333861 METTL26Q96S19 204 aa8.29□□□□□ -1.08
CCDC87-201ENST00000333861 SDHAF1A6NFY7 115 aa8.28□□□□□ -1.08
CCDC87-201ENST00000333861 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
CCDC87-201ENST00000333861 NPBQ8NG41 125 aa8.28□□□□□ -1.08
CCDC87-201ENST00000333861 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
CCDC87-201ENST00000333861 Q6Q795 121 aa8.27□□□□□ -1.09
CCDC87-201ENST00000333861 DOPEY1Q5JWR5 2465 aa8.27□□□□□ -1.09
CCDC87-201ENST00000333861 SMCR5Q8TEV8 140 aa8.27□□□□□ -1.09
CCDC87-201ENST00000333861 ICOSQ9Y6W8 199 aa8.27□□□□□ -1.09
CCDC87-201ENST00000333861 USP9YO00507 2555 aaPredicted RBP8.27□□□□□ -1.09
CCDC87-201ENST00000333861 IGHV4-4A0A075B6R2 117 aa8.26□□□□□ -1.09
CCDC87-201ENST00000333861 A0A0J9YXY3 114 aa8.26□□□□□ -1.09
CCDC87-201ENST00000333861 HERVK_113P63121 156 aa8.26□□□□□ -1.09
CCDC87-201ENST00000333861 ZNF876PQ49A33 203 aa8.26□□□□□ -1.09
CCDC87-201ENST00000333861 PTPN13Q12923 2485 aa8.26□□□□□ -1.09
CCDC87-201ENST00000333861 SAA4P35542 130 aa8.26□□□□□ -1.09
CCDC87-201ENST00000333861 RPL13AP40429 203 aaKnown RBP8.26□□□□□ -1.09
CCDC87-201ENST00000333861 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
CCDC87-201ENST00000333861 ITLN2Q8WWU7 325 aaPredicted RBP8.26□□□□□ -1.09
CCDC87-201ENST00000333861 CYSTM1Q9H1C7 97 aa8.26□□□□□ -1.09
CCDC87-201ENST00000333861 TLN2Q9Y4G6 2542 aa8.25□□□□□ -1.09
CCDC87-201ENST00000333861 IGHV3-38A0A0C4DH36 116 aa8.25□□□□□ -1.09
CCDC87-201ENST00000333861 B9A039 149 aa8.25□□□□□ -1.09
CCDC87-201ENST00000333861 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
CCDC87-201ENST00000333861 C19orf84I3L1E1 186 aa8.25□□□□□ -1.09
CCDC87-201ENST00000333861 I3L3M4 83 aa8.25□□□□□ -1.09
CCDC87-201ENST00000333861 FAM19A5Q7Z5A7 132 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms