RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 RBMY1FQ15415 496 aaKnown RBP7.88□□□□□ -1.15
CCDC172-201ENST00000333254 KRTAP1-3Q8IUG1 177 aa7.88□□□□□ -1.15
CCDC172-201ENST00000333254 MAPK1IP1LQ8NDC0 245 aa7.88□□□□□ -1.15
CCDC172-201ENST00000333254 SPXQ9BT56 116 aa7.88□□□□□ -1.15
CCDC172-201ENST00000333254 USP24Q9UPU5 2620 aa7.87□□□□□ -1.15
CCDC172-201ENST00000333254 G3V4G9 280 aa7.87□□□□□ -1.15
CCDC172-201ENST00000333254 CD300EQ496F6 205 aaPredicted RBP7.87□□□□□ -1.15
CCDC172-201ENST00000333254 SCGB1D4Q6XE38 83 aa7.87□□□□□ -1.15
CCDC172-201ENST00000333254 TMEM61Q8N0U2 210 aa7.87□□□□□ -1.15
CCDC172-201ENST00000333254 ZNRF2Q8NHG8 242 aa7.87□□□□□ -1.15
CCDC172-201ENST00000333254 DNAJC30Q96LL9 226 aa7.87□□□□□ -1.15
CCDC172-201ENST00000333254 AMELXQ99217 191 aa7.87□□□□□ -1.15
CCDC172-201ENST00000333254 MAP6D1Q9H9H5 199 aa7.87□□□□□ -1.15
CCDC172-201ENST00000333254 TMEM223A0PJW6 202 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 RBMY1BA6NDE4 496 aaKnown RBP7.86□□□□□ -1.15
CCDC172-201ENST00000333254 RBMY1EA6NEQ0 496 aaKnown RBP7.86□□□□□ -1.15
CCDC172-201ENST00000333254 KNCNA6PVL3 124 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 LEPROTO15243 131 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 RBMY1DP0C7P1 496 aaKnown RBP7.86□□□□□ -1.15
CCDC172-201ENST00000333254 KRTAP10-9P60411 292 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 BEAN1Q3B7T3 259 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 SLC25A29Q8N8R3 303 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 Q96MF0 132 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 USP9YO00507 2555 aaPredicted RBP7.86□□□□□ -1.15
CCDC172-201ENST00000333254 IGLV4-3A0A075B6K6 122 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 J3QQQ9 107 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 PRB1P04280 392 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 PCP4P48539 62 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 DEFB114Q30KQ6 69 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 LYRM7Q5U5X0 104 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 PLEKHB2Q96CS7 222 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 RAX2Q96IS3 184 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 VPS25Q9BRG1 176 aa7.86□□□□□ -1.15
CCDC172-201ENST00000333254 INSP01308 110 aa7.85□□□□□ -1.15
CCDC172-201ENST00000333254 FHL3Q13643 280 aa7.85□□□□□ -1.15
CCDC172-201ENST00000333254 RNF151Q2KHN1 245 aa7.85□□□□□ -1.15
CCDC172-201ENST00000333254 TMEM170BQ5T4T1 132 aa7.85□□□□□ -1.15
CCDC172-201ENST00000333254 C11orf72Q8NBR9 251 aa7.85□□□□□ -1.15
CCDC172-201ENST00000333254 DYNLRB2Q8TF09 96 aa7.85□□□□□ -1.15
CCDC172-201ENST00000333254 CELSR1Q9NYQ6 3014 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 IGHV3-53P01767 116 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 IGHV3-30P01768 117 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 IGHV3-30-5P0DP03 117 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 ZNF22P17026 224 aaPredicted RBP7.84□□□□□ -1.15
CCDC172-201ENST00000333254 SRSF9Q13242 221 aaKnown RBP eCLIP7.84□□□□□ -1.15
CCDC172-201ENST00000333254 DEFB136Q30KP8 78 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 C18orf65Q6ZTR6 163 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 DUX3Q96PT4 197 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 SPANXA1Q9NS26 97 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 CREBBPQ92793 2442 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 COL12A1Q99715 3063 aa7.84□□□□□ -1.15
CCDC172-201ENST00000333254 UTP20O75691 2785 aaKnown RBP7.83□□□□□ -1.16
CCDC172-201ENST00000333254 RS1O15537 224 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 SAP30O75446 220 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 LGALS3P17931 250 aaKnown RBP7.83□□□□□ -1.16
CCDC172-201ENST00000333254 TSPEAR-AS2P59090 65 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 MRPS36P82909 103 aaKnown RBP7.83□□□□□ -1.16
CCDC172-201ENST00000333254 Q6ZSV7 163 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 KLHL30-AS1Q8NEE0 82 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 VCX2Q9H322 139 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 CELSR2Q9HCU4 2923 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 SORL1Q92673 2214 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 ZNF462Q96JM2 2506 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 UBE2D3P61077 147 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 UBE2D2P62837 147 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 CFAP126Q5VTH2 177 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 IL17DQ8TAD2 202 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 PRO0461Q9UI25 63 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 TNFRSF18Q9Y5U5 241 aa7.83□□□□□ -1.16
CCDC172-201ENST00000333254 FAM208BQ5VWN6 2430 aa7.82□□□□□ -1.16
CCDC172-201ENST00000333254 CMC4P56277 68 aaPredicted RBP7.82□□□□□ -1.16
CCDC172-201ENST00000333254 NDUFA11Q86Y39 141 aa7.82□□□□□ -1.16
CCDC172-201ENST00000333254 TIMM21Q9BVV7 248 aa7.82□□□□□ -1.16
CCDC172-201ENST00000333254 PGPEP1Q9NXJ5 209 aa7.82□□□□□ -1.16
CCDC172-201ENST00000333254 FBN2P35556 2912 aa7.81□□□□□ -1.16
CCDC172-201ENST00000333254 PTPN13Q12923 2485 aa7.81□□□□□ -1.16
CCDC172-201ENST00000333254 LRRK2Q5S007 2527 aa7.81□□□□□ -1.16
CCDC172-201ENST00000333254 J3QR89 54 aa7.81□□□□□ -1.16
CCDC172-201ENST00000333254 EMP1P54849 157 aa7.81□□□□□ -1.16
CCDC172-201ENST00000333254 ATP6V0E2Q8NHE4 81 aa7.81□□□□□ -1.16
CCDC172-201ENST00000333254 FAM104AQ969W3 186 aa7.81□□□□□ -1.16
CCDC172-201ENST00000333254 MRPL16Q9NX20 251 aaKnown RBP7.81□□□□□ -1.16
CCDC172-201ENST00000333254 TMEM238C9JI98 176 aa7.8□□□□□ -1.16
CCDC172-201ENST00000333254 TSPAN13O95857 204 aa7.8□□□□□ -1.16
CCDC172-201ENST00000333254 GAGE13Q4V321 117 aa7.8□□□□□ -1.16
CCDC172-201ENST00000333254 C10orf126Q8N4M7 172 aa7.8□□□□□ -1.16
CCDC172-201ENST00000333254 FAM110AQ9BQ89 295 aa7.8□□□□□ -1.16
CCDC172-201ENST00000333254 CHCHD7Q9BUK0 85 aa7.8□□□□□ -1.16
CCDC172-201ENST00000333254 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
CCDC172-201ENST00000333254 TRBV20-1A0A075B6N2 111 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 A0A0J9YXV3 536 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 TINCRA0A1B0GVN0 87 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 DNAJC9-AS1A6NH13 148 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 CD28P10747 220 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 ODF3L2Q3SX64 289 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 LINC01587Q99440 93 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 OPRPNQ99935 248 aaPredicted RBP7.79□□□□□ -1.16
CCDC172-201ENST00000333254 UBE2D4Q9Y2X8 147 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 ZFHX3Q15911 3703 aa7.79□□□□□ -1.16
CCDC172-201ENST00000333254 NAV2Q8IVL1 2488 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms